Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3595 ATGGAATTGCAGCTTATTTTCCTGCTAATTAAGCTACATTTTGTTATATGTATTCCTCAGCTTCATGAATATGCTGCCACGTATCTGCACCATTCGAGAATCAGCAGCCATTCAAGTATTGCATTCCCACCATCAGAATCACCTTCTGGAGTTCCCGATAGTATTGCACTTCCACCTTCCAAGGCATCTTCTAGCATTCCCAGAAGTATTGCACTCTCACCTTCCAAATCATTCCCCAAAATGAAATGGACGCACAGTTCTATGGACTATCCAATATCACACCATAAGCATCACCATTCCAGAATAAAGTCCATCAACCAAGTTCCTGCACCAACCTATCCAATCCACCCTCATACTCGTCAAGGTTCTCCAGTCTTCAAATCACAACATCCATCCTCTTCACCTATGAGCTGGAATTTAAATGCAGCAGCACCAGCACCTGCACCATCAACAACAGCTCTACCACACCACTTGAATGTGCCCTCTCCTTCACCTAGAATTTCACCTTCAGGTTCATCATTGAAGAAGAAAAAGACTCCACCACCAGCATATACTTTGGTTCTACCATCTCCACCGCCTAACAAAGATTGTATGTCGGTGACTTGCTCTGAACCCTTGACATATACACCTCCTGGATCAGCTTGTGGTTGTGTATGGCCACTTCAAGTTAAACTTCGCATCAGCATTGCAATATACAAGTTTTTTCCTTTGGTTTCCAAGCTTGCCAAAGAAATTGCAGCTACTGTTTTGCTGAACCGTAATCAAGTACGCATTGTGGGAGCTGATGCAACTAGCCAGCAGCTAGAGAAAACCACTATTCTCATAAACTTGGTACCTCAAGGAGTGATGTTTGATGATACAACGGCATTTTTAATATATAAGAAATTCTGGCAGAGAGAGATTCTCAATGATGCTTCTGCCTTTGGGGACTATGAAGTGCTCTATGTTCATTATCCAGGCCTTCCACCATCTCCACCTTCAAATGTTCATGGTATAGATGTTGAACCATACCCTGGTCGCGGCAACAATGGAACAATAGTGAAACCTTTGGGAGTAGATATCTCAGGGAAGAAAAAAGAAGGGGGTGGTGGAAGAATGGTTATTATGATCGTGCTGTCATCTTTTACTGCCTTTGTTCTATTCATTGGAGTAGCCTGGCTTTGTCTCTTGAAATGTGACTCCTGCACTCTCGAACCTGAACAAATTCCAGATGTCAAAATTCAATCCTCTTCAAAGCGATCAGCAGGGACTGCCAGTGCTAGGTCATTGACTTATGGGAGCATGCCAGGTTCTAGATCAATGTCCTTCAGTTCAGGAACAATAATATACACAGGATCAGCTAAAATATTTACTTTGAATGAAATAGAGAAAGCAACAAATAACTTCAATTCTTCAAGAATATTAGGAGAAGGTGGCTTCGGTCTTGTTTATAAAGGTGACCTAGATGATGGCAGGGATGTGGCAGTGAAGATTCTCAAAAGAGAGGACCAGCATGGTGACCGTGAATTCTTTGTAGAAGCTGAGATGCTTAGTCGCTTGCACCATAGAAATTTAGTTAAATTGATAGGTTTATGCACAGAGAAACAGACTCGCTGCTTAGTCTACGAGCTCGTCCCTAATGGCAGCGTGGAATCCCACTTACATGGTGCTGACAAGGAAACCGAACCACTTGATTGGGATGCACGGATGAAGATTGCACTTGGTGCAGCTAGGGGATTGGCTTATCTGCATGAAGATTGTAATCCATGTGTCATACATAGGGACTTCAAATCCAGCAACATTTTATTGGAACACGATTTTACACCCAAAGTTTCAGATTTTGGATTGGCTAGAACAGCACTGAACGAGGGAAACAAGCACATCTCAACACATGTTATTGGAACATTTGGCTATGTAGCTCCTGAATATGCAATGACTGGTCATCTCCTTGTGAAAAGTGATGTTTACAGCTATGGAGTTGTACTCCTTGAGCTCCTAAGTGGAAGAAAGCCTGTGGATTTGTCACAGCCAGCAGGTCAAGAAAACCTTGTTGCTTGGGCTCGTCCACTTCTTACAAGTAAGGAGGGTTTGCAGAAGATCATAGACTCAGTTATAAAGCCCTGTGTTTCTGTCGATAGCATGGTAAAAGTTGCAGCAATTGCATCCATGTGTGTGCAACCAGAAGTCACTCAACGTCCTTTCATGGGTGAAGTTGTTCAGGCGTTGAAGCTGGTATGCAGTGAGTTTGAGGAAACAAGTTATGTAAGACCAAAAAGTTTTCGAGTTCCAGGTGAGAGAGTGGGCTTTTCAGAGTAA 2295 0.4283 MELQLIFLLIKLHFVICIPQLHEYAATYLHHSRISSHSSIAFPPSESPSGVPDSIALPPSKASSSIPRSIALSPSKSFPKMKWTHSSMDYPISHHKHHHSRIKSINQVPAPTYPIHPHTRQGSPVFKSQHPSSSPMSWNLNAAAPAPAPSTTALPHHLNVPSPSPRISPSGSSLKKKKTPPPAYTLVLPSPPPNKDCMSVTCSEPLTYTPPGSACGCVWPLQVKLRISIAIYKFFPLVSKLAKEIAATVLLNRNQVRIVGADATSQQLEKTTILINLVPQGVMFDDTTAFLIYKKFWQREILNDASAFGDYEVLYVHYPGLPPSPPSNVHGIDVEPYPGRGNNGTIVKPLGVDISGKKKEGGGGRMVIMIVLSSFTAFVLFIGVAWLCLLKCDSCTLEPEQIPDVKIQSSSKRSAGTASARSLTYGSMPGSRSMSFSSGTIIYTGSAKIFTLNEIEKATNNFNSSRILGEGGFGLVYKGDLDDGRDVAVKILKREDQHGDREFFVEAEMLSRLHHRNLVKLIGLCTEKQTRCLVYELVPNGSVESHLHGADKETEPLDWDARMKIALGAARGLAYLHEDCNPCVIHRDFKSSNILLEHDFTPKVSDFGLARTALNEGNKHISTHVIGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDLSQPAGQENLVAWARPLLTSKEGLQKIIDSVIKPCVSVDSMVKVAAIASMCVQPEVTQRPFMGEVVQALKLVCSEFEETSYVRPKSFRVPGERVGFSE* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3595 764 ProSiteProfiles Protein kinase domain profile. 462 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3595 764 ProSitePatterns Protein kinases ATP-binding region signature. 468 490 IPR017441 GO:0005524
Gso11g3595 764 MobiDBLite consensus disorder prediction 39 73 - -
Gso11g3595 764 MobiDBLite consensus disorder prediction 122 146 - -
Gso11g3595 764 MobiDBLite consensus disorder prediction 58 72 - -
Gso11g3595 764 SUPERFAMILY Protein kinase-like (PK-like) 441 735 IPR011009 -
Gso11g3595 764 CDD STKc_IRAK 468 736 - -
Gso11g3595 764 Gene3D Phosphorylase Kinase; domain 1 435 537 - -
Gso11g3595 764 MobiDBLite consensus disorder prediction 117 181 - -
Gso11g3595 764 Gene3D Transferase(Phosphotransferase) domain 1 538 752 - -
Gso11g3595 764 PANTHER OS01G0750732 PROTEIN 7 752 - -
Gso11g3595 764 MobiDBLite consensus disorder prediction 155 175 - -
Gso11g3595 764 PANTHER OS01G0750732 PROTEIN 7 752 - -
Gso11g3595 764 Pfam Protein tyrosine and serine/threonine kinase 465 735 IPR001245 GO:0004672|GO:0006468
Gso11g3595 764 ProSitePatterns Serine/Threonine protein kinases active-site signature. 584 596 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3595 Gso-Chr11 51643715 51649289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3595 97 744 Receptor kinase-like Gene Family AT5G56890 57.122 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gso11g3595 PK_Tyr_Ser-Thr 5.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3595 - - gmx:100775318 1488.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0216 15 1962762 1968526 Gso11g3595 11 51643715 51649289 GST
Gso11g3595 11 51643715 51649289 Gso7g0084 7 732032 737994 PCT
Gso11g3595 11 51643715 51649289 Gso8g1597 8 15619037 15625338 PCT
Gso7g0084 7 732032 737994 Gso11g3595 11 51643715 51649289 PCT
Gso8g1597 8 15619037 15625338 Gso11g3595 11 51643715 51649289 PCT