Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3593 ATGCATGCAGGAGAAGTCACGACAGCACTTTGTTTTCCTGCAACCCTCAACAAGAAAACCGCTTTAAACCTAAACCACACACTTTCTTCTCCATTTATTAATTCCTCCACTTCACTCCATGCATGCACCATATTCTTGAACCTCACACACATGTACAGTAGCATGGCTGCAACCAACGAAGCAGAAGAAGCAGCAGGAGGCAAAAGGGTCCAATACCCACTGGACTCTTCCTCCTACAAGCTCCTGAACGAGATCGGCGAAGGCGTGAGCGCCGTCGTCTACAAAGCCCTCTGCATCCCCATGAACTCCGCCGCCGTCGCAATCAAATCCATCGACCTCGACCGCTCCCGGCCCGACTTAGACGACGTCCGTCGCGAGGCCAAAACCCTATCCCTCCTTTCCCACCCCAACATCCTCAAAGCACACTGTTCCTTCACCGTGGACCGCCGCCTCTGGGTGGTGATGCCGTTCATGGCCGCAGGATCACTTCAATCCATCATTTCTCATTCCCACCCCAACGGCTTAACGGAGCCCTGCATCGCCGTGGTTCTCAGAGACACGCTCAACGCACTCTCCTACCTCCACGGCCAGGGCCATCTCCACAGAGACATTAAAGCCGGTAACATCCTCGTAGACACCAATGGGCAAGTGAAGCTCGCTGATTTCGGTGTCTCCGCTTCCATATACGAGTCCACCACCACCACGTCTTCTTCTTCGTCTCTCAAGTTCACCGATGTTGCCGGCACGCCCTATTGGATGGCTCCTGAGGTGATTCACTCACACACGGGTTACAGTTTCAAGGCTGATATATGGTCCTTTGGGATAACCGCGTTGGAGCTTGCGCATGGAAGGCCTCCCCTCTCGCACCTTCCACCTTCCAAGTCCATGATGCTCAAGATCACCAAGAGGTTTCGTTTCTCCGATGATTTCGATGACAAGTATAGGAAGGGGAATGGGAAGAAGTTCTCTAAGGCGTTCAAGGACATGGTGGCTTCTTGTCTCGACCAAGATCCTTCCAAGAGACCTACTGCTGATAAGTTGCTCAAACACCCTTTCTTTAAGAACTGTAAGGGAACCGATTTTCTGGTGAAGAATGTGCTGCAAGGGTTGCCCAGCGTGGAGAAAAGGTACAGGGAGAGCAAGGGTAATTTGCATGAAGATGATGATGATGGTGATGATGATGATGATGATCCCTCCATGCAGGTGAAGCAGAGAAGGATAAGTGGGTGGAACTTCAATCAAGACGGCTTGGAGCTTGACCCTGTGTTTCCAAACGATGTTAAAGAGGTTCGGTTTGGAGGAGAAACGGTTATCCAACAAGCTGCAGGAATGGAAAAAGTGAACAACAACAGTAGCAGTAGGGAAGGGATGTTGGCGACTCTGAATGTATTGAAAGGGAGCCTGGAGCAAGAGCTGTGGCAAGTGAAGTTTCTGGTGAATACGATACAAGGAGATCATCACGACACTCAAGTTCCTGAGGAGCAGGAGATTTCTAGGCTGAGGGCTCAATTGGAAAATGAGAGGATGAAGAACTTGCAGTTGGAGTTGCAGCTTCAGACCTCCAAGCTCCACCAGAAATCTGATTCCAACTAA 1593 0.5066 MHAGEVTTALCFPATLNKKTALNLNHTLSSPFINSSTSLHACTIFLNLTHMYSSMAATNEAEEAAGGKRVQYPLDSSSYKLLNEIGEGVSAVVYKALCIPMNSAAVAIKSIDLDRSRPDLDDVRREAKTLSLLSHPNILKAHCSFTVDRRLWVVMPFMAAGSLQSIISHSHPNGLTEPCIAVVLRDTLNALSYLHGQGHLHRDIKAGNILVDTNGQVKLADFGVSASIYESTTTTSSSSSLKFTDVAGTPYWMAPEVIHSHTGYSFKADIWSFGITALELAHGRPPLSHLPPSKSMMLKITKRFRFSDDFDDKYRKGNGKKFSKAFKDMVASCLDQDPSKRPTADKLLKHPFFKNCKGTDFLVKNVLQGLPSVEKRYRESKGNLHEDDDDGDDDDDDPSMQVKQRRISGWNFNQDGLELDPVFPNDVKEVRFGGETVIQQAAGMEKVNNNSSSREGMLATLNVLKGSLEQELWQVKFLVNTIQGDHHDTQVPEEQEISRLRAQLENERMKNLQLELQLQTSKLHQKSDSN* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3593 530 SUPERFAMILY Protein kinase-like (PK-like) 73 357 IPR011009 -
Gso11g3593 530 Gene3D Phosphorylase Kinase; domain 1 67 157 - -
Gso11g3593 530 Gene3D Transferase(Phosphotransferase) domain 1 161 400 - -
Gso11g3593 530 Coils Coil 497 522 - -
Gso11g3593 530 ProSiteProfiles Protein kinase domain profile. 79 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3593 530 Pfam Protein kinase domain 79 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3593 530 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 63 524 - -
Gso11g3593 530 ProSitePatterns Protein kinases ATP-binding region signature. 85 109 IPR017441 GO:0005524
Gso11g3593 530 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 63 524 - -
Gso11g3593 530 SMART serkin_6 79 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3593 530 MobiDBLite consensus disorder prediction 377 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3593 Gso-Chr11 51632315 51634115 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3593 69 513 MAP Kinase Kinase Kinase Kinase AT4G14480 56.303 0.0 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Gso11g3593 Pkinase 8.2e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3593 K08835 - gmx:100820227 1023.46