Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3582 ATGGGTGCTTCGGGAAGGTGGTTTAAGTCACTTCTTCCTTTTAGAAAGACCTCAACTGATCAAGAGAAGGGTGGTGACAACAAGAGTAAGAAGAAGTGGAAGCTATGGAGGGCATCTTCAGAAGGGTCCATGAAGAATGTTGGTGGTGGTGGTGCTGCTGCTGCATCTGATTCTTCCCTTACTTATGCGGTGGCTGTGATGGTTCCCAAAGATTTCAAGCTCATCAAGCAGGAATGGGCTGCCATCCGCATTCAGGCGGTGTTTCGAGCCTTCTTGGCTAGACGAGCTTTGAGGGCCTTGAGGGCAGTAGTAAGGCTACAAGCTATTTTTAGAGGCCGGCTAGTCAGGAAGCAAGCAGCTGTTACTCTGAGGTGCATGCAGGCTCTTGTTCGAGTTCAAGCACGTGTGAGGGCAAGGAATGTGAGGAATTCTCCTGAAGGGAAAGCTGTGCAGAAATTACTGGATGAGCATCACAACCACGCTGATCCTTTTAATCTAATTGAGCAAGGATGGTGTGACATTCCTGGAACTATGGATGAAGTTAAAGCAAAGCTACGAATGAGGCAAGAAGGAGCCATCAAGAGGGATAGAGCAATGGCATACTCTCTCTCCACTCAGTCAAGACTGTGTGCTAGTCCAAACCCAAAAGCCACTAAGGCATTGACTCCTGTCAAGCATAACAACCCAAGCAACAAGAGCTTAGGATATAGCTTGTTGGAACGCTGGATGGAGGCCAAGCCATGGGAGAGTCCAATCTCTAGGAAGAGTGAAGACCTTGTTCCTGCTTTTCAATCAAGAAGGAATGGTATGACAACTAGGATTTCAGTTAAGCCTATTATAACCAGTCAATCGACTTCATCATCTTCGGCCATGAGCTCTGAGTACATGTGTGATGATAATAGCCCTGTGTCAACATCTTATACCTCTGGATCTCTATCCTTGCCATCCACCAACACTGTTTTGGTGGAAGCAACAGAGGAAAGAGATGTTCATCAGCCAAGCTACATGAATTTGACAGAATCAACTAAGGCTAAACTTAAAGCCTGCAGGAGTTCTTCACAGAATTCAAAGAGACTTGTAATGGAGGACACAGTGTCTCACAATCACAGCACAACAACAGGCCTTATGAATGGAGATACTAGAAGCAGTTTTGATTCTGATCCTTCAGTTAACTTGTGGAAGGATTCTTGTGCGACACCTCTAAGGGCAAGTTATCAAAAACGACAAATTAGGATATGA 1239 0.4552 MGASGRWFKSLLPFRKTSTDQEKGGDNKSKKKWKLWRASSEGSMKNVGGGGAAAASDSSLTYAVAVMVPKDFKLIKQEWAAIRIQAVFRAFLARRALRALRAVVRLQAIFRGRLVRKQAAVTLRCMQALVRVQARVRARNVRNSPEGKAVQKLLDEHHNHADPFNLIEQGWCDIPGTMDEVKAKLRMRQEGAIKRDRAMAYSLSTQSRLCASPNPKATKALTPVKHNNPSNKSLGYSLLERWMEAKPWESPISRKSEDLVPAFQSRRNGMTTRISVKPIITSQSTSSSSAMSSEYMCDDNSPVSTSYTSGSLSLPSTNTVLVEATEERDVHQPSYMNLTESTKAKLKACRSSSQNSKRLVMEDTVSHNHSTTTGLMNGDTRSSFDSDPSVNLWKDSCATPLRASYQKRQIRI* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3582 412 Pfam IQ calmodulin-binding motif 79 98 IPR000048 GO:0005515
Gso11g3582 412 Pfam IQ calmodulin-binding motif 101 118 IPR000048 GO:0005515
Gso11g3582 412 ProSiteProfiles IQ motif profile. 101 128 IPR000048 GO:0005515
Gso11g3582 412 PANTHER IQ-DOMAIN 5-RELATED 1 408 - -
Gso11g3582 412 SMART iq_5 76 98 IPR000048 GO:0005515
Gso11g3582 412 SMART iq_5 99 120 IPR000048 GO:0005515
Gso11g3582 412 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 408 - -
Gso11g3582 412 Gene3D - 75 128 - -
Gso11g3582 412 ProSiteProfiles IQ motif profile. 77 105 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3582 Gso-Chr11 51546036 51549203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3582 1 395 IQD Protein Family AT1G72670 45.093 8.13e-90 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3582 - - gmx:100816492 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0226 15 2062091 2064793 Gso11g3582 11 51546036 51549203 GST
Gso11g3582 11 51546036 51549203 Gso7g0070 7 613253 616194 PCT
Gso11g3582 11 51546036 51549203 Gso8g1584 8 15476603 15479518 PCT