Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3579 ATGGACCCCCGCAAAGAGAGAATAAAGAATGGGTGCCTGAAGATTTTGGAAGGAATAAATTCAATGTCTTTGGTAAATTTAGATGACCAGCAAGTCCATTCCTTAGTGATGATGAGAGAAATAGCACGTGGGGTTGTTGATGATCGAGATAGAAAGGTTACTAAAAGTGATGTGATCACTGCATTGCGCCACAGCATTGAGAAAATGGTGTGTGCATCCAGGGATATCATTCAAATATTAAGTAGGATGTCCTTTGAAGGCTTGGATGACCAGAGCATGCATTTAGTCATGAGGATGAAAGAAATTGCAAATGGGGTTATTGATAAGCAACCTAGAGTTGCAATAACTAGGCCTGACTTACTTGCTGAACAAGTTGGATTTGTGGATGAAGGGATGAGAGATAGTCCCGTGGTTGAGTCAACCAAGATCAGCAATGGGTATGTTCCGATTGGCGGGGCACAGAGCATGACTAATGAAGATGAGATGTTGGATGTGGAACATGTTTTAAGATTTGAAAATGGGATAGATGAAGTTCACGAGTCTTTGTTACCTTGTTTTCAGCAGTTTCTTCTGTGGCCACCTGATGATTGTGTCACCTTAGAGTGGGTTCAGGACATGATGGTCATCCTTGAGCAGGCTTCACAGAAGATGTTGCCATCTGAATTCTGTCATATCGTGCCGGCCATTTTGGTGGACAAATTGGCAGATGCTGCTTGCAGTATTTTATGTAAAGAACCAAACTGTGTGGAGATTAATTGTCAAGGAGAAGATTCAAAAGTAATTGTAGTAGGCGATGTACATGGGCAGTTTCATGATTTAATGTTTCTTTTCAAGCATGCAGGGGTTCCCTCTGAGAACCGGATTTATGTTTTTAATGGAAATTATGTAGATAAGGGAGCTTGGGGAATTGAAGTACTTTTGTTCTTGCTGGCTTGGAAGGTCTTGATGCCTCATAGAGTATATCTACTTCGTGGGAATCATGAATCAAGATATTGCACTGCAAGATATGGTTTTAAGAAGGAGGTGTGGGCCAAATATGGTGATCAAGGTGAAGATGTCTACAATAAATTCCTAGCATGTTTTAAGGAGCTTCCATTAGCTTCAGTTATTGCCAATTGTGTTTATACTACTCATGGAGGACTTTTCCGTAGTATACACGCAGCCCCTTCACAGAAACCGAAACGAAATAAAACACACAGGGTGGATCTCGGCTCTTTAGCTGAGTTATCTGAAGTTAAAAGATCTTTTGTAGATTGCCCTTATGAAGGTCCTAATATATTATTGAGTGATGTTCTCTGGTCAAGACCATCTAACAGGGATGGTCTGAGGGATAATACAGGTCAAAAGTTAGGTTTATTGTGGGGTCCTGATTGCACTGAGGCATTCTTAAAGCAGTACAATTTAAAGCTGATTATCAGATCACATGAAGGACCAGACGCAAGGGCTGGTAGAGATGATGATTTCGGGGACATGCTAAGTGGATACAGCATAGATCATGATGGAGAATCGGGAAGACTGTATACTCTTTTTAGTGCTCCAGACTATCCACAGTTTGGTAAAAGGAGATATAACAATAAGGGGGCATATGCAGTATTGAAGTCGCCTGATTTTGCCAGCCCTTCGTTTCACTCATTCAAAGCAGCAGAAAGACCAATGGTGGATCCTTACTTTGATTTTGATGCCAATTATATGGAATCGAGTAAACTAGACTCTTCTCAAAGTGCCTCAACCTCTACCCTTTCTGCTCCTCAAAGATTTTATTCAGATGGGATGAGACCTGAGTTTGACTTTGGGGCATTAGGCATATACAATGCCCCAGGTTGGAGGGTTGAGCTTCCTGATGGTTCAGGAGGTACTCAAGCTGTTGAGGTTCCAAGGGCACCATTGGCGGAAGGATTGCCTCTGCCTCCAAACATACAGGAGCCACACAAGGCTGCTTATGAGTATTTGTTTGAGCTAGTTGCTGGCCTGAAACATATGATTGTAACAAGGGAGACTGAGAACAGGGCCCCTGTGTCTGCTTTGAGAAGTAGAACTAGGAAACGAGAAGGTAAGGGTAACTCATAG 2067 0.4219 MDPRKERIKNGCLKILEGINSMSLVNLDDQQVHSLVMMREIARGVVDDRDRKVTKSDVITALRHSIEKMVCASRDIIQILSRMSFEGLDDQSMHLVMRMKEIANGVIDKQPRVAITRPDLLAEQVGFVDEGMRDSPVVESTKISNGYVPIGGAQSMTNEDEMLDVEHVLRFENGIDEVHESLLPCFQQFLLWPPDDCVTLEWVQDMMVILEQASQKMLPSEFCHIVPAILVDKLADAACSILCKEPNCVEINCQGEDSKVIVVGDVHGQFHDLMFLFKHAGVPSENRIYVFNGNYVDKGAWGIEVLLFLLAWKVLMPHRVYLLRGNHESRYCTARYGFKKEVWAKYGDQGEDVYNKFLACFKELPLASVIANCVYTTHGGLFRSIHAAPSQKPKRNKTHRVDLGSLAELSEVKRSFVDCPYEGPNILLSDVLWSRPSNRDGLRDNTGQKLGLLWGPDCTEAFLKQYNLKLIIRSHEGPDARAGRDDDFGDMLSGYSIDHDGESGRLYTLFSAPDYPQFGKRRYNNKGAYAVLKSPDFASPSFHSFKAAERPMVDPYFDFDANYMESSKLDSSQSASTSTLSAPQRFYSDGMRPEFDFGALGIYNAPGWRVELPDGSGGTQAVEVPRAPLAEGLPLPPNIQEPHKAAYEYLFELVAGLKHMIVTRETENRAPVSALRSRTRKREGKGNS* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3579 688 MobiDBLite consensus disorder prediction 674 688 - -
Gso11g3579 688 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 4 677 - -
Gso11g3579 688 PRINTS Serine/threonine phosphatase family signature 259 286 IPR006186 GO:0016787
Gso11g3579 688 PRINTS Serine/threonine phosphatase family signature 289 316 IPR006186 GO:0016787
Gso11g3579 688 PRINTS Serine/threonine phosphatase family signature 322 346 IPR006186 GO:0016787
Gso11g3579 688 PRINTS Serine/threonine phosphatase family signature 359 385 IPR006186 GO:0016787
Gso11g3579 688 PRINTS Serine/threonine phosphatase family signature 505 521 IPR006186 GO:0016787
Gso11g3579 688 Pfam Calcineurin-like phosphoesterase 259 478 IPR004843 GO:0016787
Gso11g3579 688 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 4 677 - -
Gso11g3579 688 MobiDBLite consensus disorder prediction 669 688 - -
Gso11g3579 688 SMART pp2a_7 226 549 IPR006186 GO:0016787
Gso11g3579 688 ProSitePatterns Serine/threonine specific protein phosphatases signature. 323 328 IPR006186 GO:0016787
Gso11g3579 688 SUPERFAMILY Metallo-dependent phosphatases 221 557 IPR029052 -
Gso11g3579 688 Gene3D - 195 586 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3579 Gso-Chr11 51514716 51521443 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3579 190 470 Calmodulin-binding Proteins AT5G63870 52.234 6.81e-99 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3579 K04460 - gmx:100779241 1125.15