Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso11g3577 | ATGGAACCTCGGGTTGCGAACAAGTTCCGTCTTGGCCGCAAGATTGGTAGCGGATCCTTCGGCGAGATCTATCTCGGTACGAATACTCAGACAAATGAAGAGGTTGCAGTTAAGCTCGAAAATGTCAAAACTAAGCATCCTCAATTGTTGTACGAATCAAAGTTGTATAAAATACTGCAAGGAGGAACTGGGATCCCAAATGTGAGATGGTTTGGAGTTGAAGGAGATTACAATGTCCTTGTGATGGATTTACTGGGACCTAGTCTTGAGGATTTATTCAATTTCTGTACCCGTAAATTGTCCCTCAAAACTGTTCTCATGCTTGCTGATCAGATGATAAATCGAGTTGAATTTATTCATTCCAAATCATTTTTACATAGGGACATCAAGCCAGACAACTTCCTAATGGGTTTGGGGAGGCGTGCAAATCAAGTTTATGCCATTGACTTTGGTCTTGCTAAGAAGTACAGAGACACCTCTACCCATCAACATATTCCTTACAGAGAGAATAAGAATTTGACTGGAACTGCTAGATATGCTAGTATGAATACTCATCTTGGAATTGAGCAAAGCCGTAGGGACGACTTAGAATCACTTGGATTTGTTCTTATGTATTTTTTGAGAGGAAGTCTCCCATGGCAGGGATTGAAAGCAGGTACTAAGAAGCAGAAGTATGAGAGAATCAGTGAGAAGAAAGTTTCTACTTCTATTGAGTCTCTGTGCCGTAGCTACCCCTCAGAGTTCGCTTCATACTTTCATTACTGTCGGTCACTGCAATTTGATGATAAACCAGATTATGCTTATCTGAAAAGGCTTTTCCGTGACCTTTTCATTCGTGAAGGATTCCAGTTTGATTATGTCTTTGATTGGACCATTTTGAAATATCAGCAATCTCAAATTGCCACACCTCCTGCTCGTGCTATTGGTCCTGCTGCTGGACCAAGTTCTGGGCTGCCACCAGCTGTTGTAAATGCTGATAGACAGACAGGTGGGGAAAACAGTAGGCATACTGGTTGGTCTTCATCTGATCCTGCTCGAAGAAGAAACTCTGGACCTATTGCAAATGATGGAATGTTGTCAAGACAAAAAGCCCCATTTCCAAGTGATTCAACTCGATCTAAAGATGTTATGTTGTCTAGTTCTAATTTCCGTTCAAGTGGATCTACAAGGCGAGGTGTTGTATCAAGCAGTCGTGATGCAACTGTTGGCAATGAGACTGAGCCTTCTCATCCTCTCACCGTGGATGCTAGTCAAGGAGCACTTCGTAAAATCTCCGGTGCTCAAAGAAGTTCACCTATTATGCCATTTGAGCACAACCGAACATCCTCTGGAAGAAATACATCAAACATGAAGAATTACGAGTCAACTATCCGGGGTATTGAGACCCTAAATTTCAATGACGAGAGGTTACAGTATTAG | 1419 | 0.42 | MEPRVANKFRLGRKIGSGSFGEIYLGTNTQTNEEVAVKLENVKTKHPQLLYESKLYKILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCTRKLSLKTVLMLADQMINRVEFIHSKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGFVLMYFLRGSLPWQGLKAGTKKQKYERISEKKVSTSIESLCRSYPSEFASYFHYCRSLQFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQIATPPARAIGPAAGPSSGLPPAVVNADRQTGGENSRHTGWSSSDPARRRNSGPIANDGMLSRQKAPFPSDSTRSKDVMLSSSNFRSSGSTRRGVVSSSRDATVGNETEPSHPLTVDASQGALRKISGAQRSSPIMPFEHNRTSSGRNTSNMKNYESTIRGIETLNFNDERLQY* | 473 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso11g3577 | 472 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 307 | - | - | |
Gso11g3577 | 472 | PANTHER | CASEIN KINASE-RELATED | 1 | 457 | - | - | |
Gso11g3577 | 472 | MobiDBLite | consensus disorder prediction | 327 | 348 | - | - | |
Gso11g3577 | 472 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 124 | 136 | IPR008271 | GO:0004672|GO:0006468 | |
Gso11g3577 | 472 | PANTHER | CASEIN KINASE 1-LIKE PROTEIN 2 | 1 | 457 | IPR030509 | GO:0004672|GO:0005524 | |
Gso11g3577 | 472 | SUPERFAMILY | Protein kinase-like (PK-like) | 6 | 290 | IPR011009 | - | |
Gso11g3577 | 472 | MobiDBLite | consensus disorder prediction | 364 | 412 | - | - | |
Gso11g3577 | 472 | MobiDBLite | consensus disorder prediction | 306 | 412 | - | - | |
Gso11g3577 | 472 | MobiDBLite | consensus disorder prediction | 431 | 450 | - | - | |
Gso11g3577 | 472 | MobiDBLite | consensus disorder prediction | 432 | 450 | - | - | |
Gso11g3577 | 472 | SMART | serkin_6 | 9 | 287 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso11g3577 | 472 | Pfam | Protein kinase domain | 10 | 226 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso11g3577 | 472 | ProSitePatterns | Protein kinases ATP-binding region signature. | 15 | 38 | IPR017441 | GO:0005524 | |
Gso11g3577 | 472 | CDD | STKc_CK1_delta_epsilon | 8 | 282 | - | - | |
Gso11g3577 | 472 | ProSiteProfiles | Protein kinase domain profile. | 9 | 278 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso11g3577 | Gso-Chr11 | 51487222 | 51492436 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso11g3577 | 7 | 223 | EF-hand Containing Proteins | AT2G17890 | 27.556 | 1.28e-14 | 74.3 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CK1_CK1 | Gso11g3577 | Pkinase | 7.8e-27 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso11g3577 | K02218 | - | gmx:100778165 | 912.909 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso15g0230 | 15 | 2109299 | 2114586 | Gso11g3577 | 11 | 51487222 | 51492436 | GST | |
Gso11g3577 | 11 | 51487222 | 51492436 | Gso7g0062 | 7 | 559584 | 563721 | PCT | |
Gso11g3577 | 11 | 51487222 | 51492436 | Gso8g1577 | 8 | 15378477 | 15382679 | PCT |