Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3569 ATGGCTTCAAATGCAGGAGAAGAAGAGTCTACCGTGATCGCCATTGATAGCGACCGGAACAGCCTACACGCCGTCAAGTGGGCTGTGGAACATCTTTTGAAGAAGAACGCTTCTTGCACCCTCATTCACGTCAGAACCAAGACTTTGTATTCACATGATTTTGAGGTTATCCCTAAACAAGGTCGTCTGCCAACAGAAGAAGAATTGCACCAATTTTTTCTTCCCTTTCGAGGATTTTGTGCACGAAAAGGGATCGTAGCCAAGGAGTTAGTCCTGCATGACATTGACGTTTCAAATGCGCTTACTGATTACATCATTGACAACTCTATCAGCAATATCGTTGTTGGCGCTTCCCGCTGGAATGCTCTTATAAGGAAATTTAAAGATGCAGATGTGGCAACAAGCTTAGTCAGATCTGTGCCAGAGACTTGCACGGTGCATGTTATATCAAAAGGAAAAGTGCAGAATATTCGACCTGCAGGCCATTCTCAAAATATTAGTAACGCACTATCAAAATCTTTAAAAGGCATCAAAGGAAGTTTTCAGTCTGAAGATTTAAACAGAAAATCGGTCAAGTATGGACATAAGCAAGGCTCAAACAATGATGGGGTATCTTTGGTGACACCACGTATGACCAATGGAGAGACTACTTCTCCAAAACTATCAGATGAAAGTTGCTCCTCACAAAATTCATCCAATCGAAGTTCCCTAACGGGTGATACTTCAAAGCTGCTTGGTTATCAATTGACTGAGATGTCACCTGAAAACCAAGATGTAGTTGAAAATTCAGGCAGTTACACTTTTAGGAGCAATTCTTGTAAAATATCCCAAGCAATGAAGCATGAAAAGTTTACGCAAAAAGAAGATGCAGTTAAAGCTTGGCTTCCTGAAGAGGCTACATTGACTTTGACAGAGGTAGAAAGGAAGAAAACCAAGGCATCTATGGAGTCAGCTGAAATGTTAAAATGCCTAGCAGAAATGAAGAGTCACAAGGGAAAACAAACTGGAATAAGAGCCATGCATGAGGAAGAAGAGAGGAATAAAGCATTAAATGCTAGTGCTTGTAATAACAAAATTTTATTTAAAAGATACAATATTAAAGAAATTGAAGTTGCAACTAATTACTTTGACAATGCCCTCAAAATCGGTGAAGGTGGTTATGGACCTGTTTTTAAAGGAGTGCTTGATCACACTGAGGTTGCAATCAAGGCCCTCAAACCAGACATATCCCAAGGGGAAAGGCAGTTTCAACAAGAGGTTAATGTTTTGAGCACAATAAAGCATCCAAACATGGTTCAACTGCTAGGTGCCTGTCCAGAGTACGGGTGCCTTGTATATGAGTACATTGAAAATGGTAGCTTAGAAGATCGCCTCTTCCAAAAAGATAACACTCCAACAATTCCATGGAAAGTTCGATTCAAAATAGCATCAGAAATTGCCACTGGCCTTCTTTTCCTTCACCAGACAAAGCCTGAGCCGGTTGTGCATCGTGATCTCAAGCCAGCAAACATTTTGTTGGACCGCAACTATGCGAGCAAGATCACTGATGTGGGTTTGGCAAGGCTAGTTCCTCCTAGTGTAGCCAACAAAACCACTCAATACCACAAGACAACTGCAGCTGGTACATTTTGCTACATTGACCCAGAATATCAACAAACTGGACTATTGGGTGTAAAATCAGACATATATTCATTAGGTGTAATGCTGCTACAAATTATCACTGGAAAACCTCCAATGGGTGTGGCACACCTTGTTGAGGAGGCTATAGACAAAGGTAAACTCCAAGAGGTGCTTGATCCAAATGTCACAGATTGGCCCCTTGAAGAGACTTTATCATATGCTAGGTTGGCTTTGAAGTGTTGTGAGATGAGAAAACGGGATAGACCAGACCTTCGTTCTGTCATTTTGCCAGAGCTGAATCGACTCCGAAATCTGTGA 1938 0.4143 MASNAGEEESTVIAIDSDRNSLHAVKWAVEHLLKKNASCTLIHVRTKTLYSHDFEVIPKQGRLPTEEELHQFFLPFRGFCARKGIVAKELVLHDIDVSNALTDYIIDNSISNIVVGASRWNALIRKFKDADVATSLVRSVPETCTVHVISKGKVQNIRPAGHSQNISNALSKSLKGIKGSFQSEDLNRKSVKYGHKQGSNNDGVSLVTPRMTNGETTSPKLSDESCSSQNSSNRSSLTGDTSKLLGYQLTEMSPENQDVVENSGSYTFRSNSCKISQAMKHEKFTQKEDAVKAWLPEEATLTLTEVERKKTKASMESAEMLKCLAEMKSHKGKQTGIRAMHEEEERNKALNASACNNKILFKRYNIKEIEVATNYFDNALKIGEGGYGPVFKGVLDHTEVAIKALKPDISQGERQFQQEVNVLSTIKHPNMVQLLGACPEYGCLVYEYIENGSLEDRLFQKDNTPTIPWKVRFKIASEIATGLLFLHQTKPEPVVHRDLKPANILLDRNYASKITDVGLARLVPPSVANKTTQYHKTTAAGTFCYIDPEYQQTGLLGVKSDIYSLGVMLLQIITGKPPMGVAHLVEEAIDKGKLQEVLDPNVTDWPLEETLSYARLALKCCEMRKRDRPDLRSVILPELNRLRNL* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3569 645 Pfam Universal stress protein family 12 145 IPR006016 -
Gso11g3569 645 CDD STK_N 10 152 - -
Gso11g3569 645 Pfam Protein kinase domain 380 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3569 645 ProSiteProfiles Protein kinase domain profile. 376 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3569 645 Gene3D Transferase(Phosphotransferase) domain 1 449 644 - -
Gso11g3569 645 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 12 148 - -
Gso11g3569 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672|GO:0006468
Gso11g3569 645 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 10 645 - -
Gso11g3569 645 SMART serkin_6 376 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3569 645 MobiDBLite consensus disorder prediction 192 240 - -
Gso11g3569 645 Gene3D HUPs 9 150 IPR014729 -
Gso11g3569 645 SUPERFAMILY Protein kinase-like (PK-like) 359 635 IPR011009 -
Gso11g3569 645 Gene3D Phosphorylase Kinase; domain 1 354 448 - -
Gso11g3569 645 PANTHER OS02G0152300 PROTEIN 10 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3569 Gso-Chr11 51422953 51427460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3569 89 645 Receptor kinase-like Gene Family AT5G12000 48.191 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gso11g3569 Pkinase 1.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3569 - - gmx:100814365 1270.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0237 15 2167062 2171685 Gso11g3569 11 51422953 51427460 GST
Gso7g0310 7 2843559 2849205 Gso11g3569 11 51422953 51427460 PCT