Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3538 ATGGATCACCAATCTGGCCAGGGATTTAATTCAGATGATAGTGACCTTGATATGCAAGCAGAAATTAGTGAGAAACCCAAGAAAGTAGATGAATTTTCAAAAAACTTAGAATTATGTGGAAGTGAAGATGAAATGTTTGTTGAAATTGAACAACCTTTAGCCAACATTTCAACTGATATAGAAGCTGTAGAACCATTCATAGGCATGGAGTTCAATTCAAGAGAGGAAGCCAGAGAATTCTACATTGCCTATGGTAGGAGGGTGGGGTTTACAGTACGAATACACCATAACCGTCGTTCACGAGTAAATAACCAGGTTATTGGTCAAGATTTTGTCTGTTCTAAAGAAGGCTTTCGTGCAAAAAAGTATGTACACAGAAGAGATCGAGTGCTGCCTCCTCCACCAGCCACTCGTGAAGGTTGTCAGGCCATGATAAGGTTGGCTTTGCGGGATGGAGGGAAGTGGGTTGTCACCAAATTTGTGAAGGAGCATACTCATAAACTAATGAGTCCCAGTAAAGTTCCATGGCGAGGATCTGGGAAGCACTTGGTTAGTGAGGATGAGAAGGATAAGAGAATCCGTGAACTGTCGCTTGAGTTGTACAATGAAAGGCAAAAGTGTAAACGACGTTGTGCTGCATATGAAGAGCAGTTAAATATGATTTTGAATGATTTAGAAAAGCACACAGAACACATCTCTGAAAAGGTTGCTGCTGTAGTACGAAGCATAAGAGAGATTGAGGAGGAAATATCAGATTCAGATGGTGGGTAA 771 0.4099 MDHQSGQGFNSDDSDLDMQAEISEKPKKVDEFSKNLELCGSEDEMFVEIEQPLANISTDIEAVEPFIGMEFNSREEAREFYIAYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVHRRDRVLPPPPATREGCQAMIRLALRDGGKWVVTKFVKEHTHKLMSPSKVPWRGSGKHLVSEDEKDKRIRELSLELYNERQKCKRRCAAYEEQLNMILNDLEKHTEHISEKVAAVVRSIREIEEEISDSDGG* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3538 256 MobiDBLite consensus disorder prediction 1 16 - -
Gso11g3538 256 Pfam FAR1 DNA-binding domain 79 169 IPR004330 -
Gso11g3538 256 MobiDBLite consensus disorder prediction 1 28 - -
Gso11g3538 256 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 255 - -
Gso11g3538 256 Coils Coil 204 231 - -
Gso11g3538 256 PANTHER FAR-RED IMPAIRED RESPONSE-LIKE PROTEIN 1 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3538 Gso-Chr11 51185873 51190053 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gso11g3538 FAR1 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3538 - - gmx:100813124 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0270 15 2449128 2453235 Gso11g3538 11 51185873 51190053 GST