Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3525 ATGGATCCAGAAAGATCAGTAGAGGATCAATTCTCCAAGCTGCATCCTTCCATGCCAGTAAACACCAGAATTGGAATAGTGGGTGCTGGTCCAAGTGGCTTATCAGTTGCTTATGCACTGGCCAGACTTGGTTATAATAATATCACTGTCTTGGAGAAGCATCATACAGTTGGTGGCATGTGTGAATCAGTTGAAATTGAAGGAAAAATATATGATCTAGGTGGCCAAGTTTTGGCTGCAAGCAGTGCTCCTGTCATCTTTCACTTGGCAAAAGAGACAGGCTGTACACTAGAAGAAATGAACTCCCACAAGCTTGCTGTTATTGACAGCTCCTCTGGAAAATACCAAGATGTTAAAGTTGCTGATGATTATGTATCTGTTATGTCACTAACATTGCAAATCCAAGAAAAGGTGAAGAATTCTGGTCGTTTTGGGGTTCATGCTCTCAGTGAAGTTGCTTCAGACTTAGCTCCAGATTATCTTGAGCGTCAAGGACTTAAATCTGTTCCTAAATCTGTGGCTTATGGTTATACTGCTTCAGGATATGGATTTATTCAAGACATGCCTTATGCTTACATTCATGAATTTACCAGAACTTCCATGGCTGGAAAAATTCGACGATTCAAAGGTGGATATACAAGTCTTTGGCAGAGGATTGCTGAATCAATTCCAATAAAACTTCACTATAGCACTGAGGTGTTGGCAATCAGGCGGAACTCTGACACTGTCACTGTTAATGTCAAGGGCTCAAATGAAATCGAAACTATGGAATTTGATAAGATCATAATCTCTGGTAACTTTCCATTAAAATATGGAAGAACTTATAGATCGGCGCCTTCAACTTGCTTAGGTATGTAA 858 0.4009 MDPERSVEDQFSKLHPSMPVNTRIGIVGAGPSGLSVAYALARLGYNNITVLEKHHTVGGMCESVEIEGKIYDLGGQVLAASSAPVIFHLAKETGCTLEEMNSHKLAVIDSSSGKYQDVKVADDYVSVMSLTLQIQEKVKNSGRFGVHALSEVASDLAPDYLERQGLKSVPKSVAYGYTASGYGFIQDMPYAYIHEFTRTSMAGKIRRFKGGYTSLWQRIAESIPIKLHYSTEVLAIRRNSDTVTVNVKGSNEIETMEFDKIIISGNFPLKYGRTYRSAPSTCLGM* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3525 285 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 1 281 - -
Gso11g3525 285 Gene3D - 18 274 IPR036188 -
Gso11g3525 285 PRINTS Adrenodoxin reductase family signature 23 45 - -
Gso11g3525 285 PRINTS Adrenodoxin reductase family signature 47 60 - -
Gso11g3525 285 SUPERFAMILY FAD/NAD(P)-binding domain 18 271 IPR036188 -
Gso11g3525 285 PANTHER OS04G0473900 PROTEIN 1 281 - -
Gso11g3525 285 Pfam Flavin containing amine oxidoreductase 32 265 IPR002937 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3525 Gso-Chr11 51076789 51078513 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3525 23 113 Acyl Lipid Metabolism Gene Families AT3G23530 27.473 9.90e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3525 - - gsj:114373399 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0282 15 2572426 2580300 Gso11g3525 11 51076789 51078513 GST
Gso11g3525 11 51076789 51078513 Gso12g0456 12 4017164 4020026 PCT
Gso11g3525 11 51076789 51078513 Gso11g1111 11 9967696 9974607 PCT
Gso12g0456 12 4017164 4020026 Gso11g3525 11 51076789 51078513 PCT
Gso11g1111 11 9967696 9974607 Gso11g3525 11 51076789 51078513 PCT