Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3524 ATGGATGCAAGTGAGCTTGAAAAGGATTTATTCAGCAAAGTAGAAACAAATGACTACTACACAACAGTTTTAAAGATCAAAGGGCTGGAACGTATGCCGGTTGGATTTTATTATTTTAGTGAATATATGGAAGATCCCAGCACAATTGGAAATCCAGTTGCCATGCAGAAATTTTATGCTGACAGTAACATATTCTTGTTCTGGTCCTATGGAAACTCTGCTGATATTAAGGGACCAACTGTCACTGAGCTTGCAATCAAATCAATAGAATCCATGGGGGGAGAAGTTCAGAATATCATTCTTCAACGTCGCTTTAAGTATTTTCCTCATGTTAGCAGTCAAGATATGAGAAACGGATTCTATGAAAAGTTGGAGTCAGAGCTTCAAGGCTCGAGGAATACTTATTATGTTGGTGGGCTTATGGCATTTGAGCTTACAGAGAGAAATTCATCTTATGCCATGGCTTTGATCTGCAAGAACTTTGCAAATAGCAGTGATTTGCCAGTGTTTCCTTACACTAAGAGTTTGTTTCCCTTGCAAACTGATATCCAGAAAAAGGAGCCTAAAGAACTAGTTGAATTGCCTGGAGTGCAATTTCCCAATTTGCCTGCTTTGAATAGCTATTTAAAGCACTGGGGAACTCATCCAATCACTCAAAACAGAACTCTTTATACTTGGCTAAATGAAGGAGGGACTGTGGTTGGCAAGAGGACATATGGAGAACAACATTTAAATGCTTCTTGCATTGCACATAAGCTCTTAACAAGCCAAAAGCCGGTTATCAAGCCTGGTGACAGGGTTCTCCTAGTCTATGTTCCTGGCCTAGATTTTGTTGATGCCTTCTTTGGATGTCTAAGAGCTAAAGTTTTACCAGTCCCAGTTCTTCCCCCAGACCCCATGCAGAGAGGTGGACAAGCACTTCTTAAAATTGAGAACATTGCCAAGTCATGCGGCATAGTGGCAATTTTATCAACGGCATCTTACCACACAGCAGTACGTGCCGGTCTAGTGAAAAGCTTGATCTCATTAACTGGGAAAAATGGTAAATACACAGCTCAATGGCCAAAACTTCCGTGGCTGCACACCGATACTTGGGTCAATAACTCAAGAAATTCGGCTGTGGAAGATGTAGATGATCAATGTGAACCCCAGCCTGGTGATGTATGTTTCTTGCAGTTTACCTCAGGTTCAACTGGTGATGCTAAAGGAGTCATGATAACACATGGAGGGCTCGTTCACAATGTGAAGTTGATGAGAAGTAGATACAAGAGCACCTCAAGGACAGTGCTAGTGAGTTGGCTTCCTCAATATCATGACATGGGGCTGATTGGAGGACTTTTTACAGCTCTTGTTAGTGGTGGATCTGCTGTACTGTTTTCACCATTGACATTTATTAAGAAGCCACTCTTATGGCTTGAAACCATCAGCAAGTATCAAGCAACTCACAGTGCCGGACCCAACTTTGCTTTTGAGTTGGTGGTTCGAAGGTTAGAGTCCGAGAAAGACAAGCTTCAGAGTTTAGACCTTTCATCCATGATTTTCCTTATGGTTGCTGCTGAGCCGGTGAGGATGAAGACCTTGAAAAGATTTCTTGATCTAACCACTCCTTTTGGCTTATCTCAAAAGGTGATGGCTCCAGGATATGGCTTAGCAGAAAATTGTGTGTTTGTGAGTTGTGCATTTGGAGAAGGATGTCCTATTCTTGTTGATTGGCAAGGAAGAGTTTGTTGTGGATATATTCACCCAGGCGATTCAGACGTTGACATTATAATAGTTGATCCAGAGAGTGGTGAAGAGCTTGAGGAAGATGGAAGGGAAGGAGAAATCTGGATAAGTAGTCCAAGTGCTGGAATAGGATACTGGGGAAAGGAAGAACTGAGTCAGAAAACTTTTAGAAATAAGCTTCAGAACCATCCTGGACGCAACTACACAAGAACTGGAGACTTGGGAAGAATTATAGATGGGAAGCTATTCATCACTGGGAGAATCAAGGATCTTATCATTGTGGCTGGAAGAAACATCTACTCAGCAGATGTTGAAAAGACGGTTGAGAGTTCATCTGAATTTCTTCGTCCGGGATGCTGTGCAGTCATTGGTGTCCCTGAGGAGATTTTATCAGCAAAGGGGATTTCCCTGCCAGATGGATCAGACCAAGTTGGCTTGGTTGTGGTTGCTGAAGTAAGGGATGGTAAAACAGTTAGCAAAGATGTGATTGAGCATATTCAGACACGTGTGGTTGAAGAACATGGAGTTAGTGTTGCTTCTGTCAAGTTGATCAAGCCAAGAACCATCAGCAAAACAACATCAGGAAAAATCAAGAGATTTGAGTGTCTCAAACAGTTTTCAGATGAAACACTGAACCTGGTTCCACAACCTATTTTGACAAAGAAATCACTGTTGAGGTCATTTACTACAGGAACATGCAGAGAAGGAAGAACACCTCGGGCACATTTGGTGAGAAGTAGTTCTCCTCTACCTATTCCAAGAATCAGCAACAAGGAAATTGTGGAACACTTGAAAAGGATTATTTCTGACCAGTCTGGAATCCCGGTCAACAATATCTCAGTCACAGACAACATGTCAACCTATGGAATTGATTCAATTGGAGTGGTCAAAGCAACTCAAAAACTCACAGATTTCCTGGGAGTGCCAGTTGCGGCTATAGATGTTTTCACTGCATCATGCATTCAAGAATTGGCTAACTTCTCTGAGAATCTTCTACTCAAGTCTCAACCTCAACTCATGAGCAATTCACCACATGCTCCAGAAGCTGAAATTGATTTTACTGAAGTGGTTGTGGATGTATCCAAGTCTCGCCAATGGGGTATCCGTTTACTTCAACTCCTAGCACTTGTTTATATTTCTATCATGCTGGTCACTCCTGCTTATCTATCCATCACTGCTTTTCAAAGTTTCATACCAAATGCCAGTGAATCGGTATATGGAATGCCTTGGTCAAGCTATTTGATTTCTTTGACTTTGGCACCACTTTCTTGGATCCTTTGCATAGTTTCCACTTGCCTTTGCATTTCCTTTTTTGGGAATTCTTTCTTGAGGCCAAACTATGCCCTTACACCTGAAATATCCATTTATTCAATGGATTTTGTTAAGTGGTGGGCGCTCTATAAAACTCAGGAAATTTCTTCAAAAGTTTTGGCAACACACCTCAGAGGAACAGTGTTTCTGAAATACTGGTTTGAGATGCTCGGTGCAAGAATTGGATCCTTAGTTTTGCTTGACACAGTGGACATCACCGACCCATCTCTGGTTTCAATTGGAGATGAAGTTGCCATTGCAGAAGGGGTTTTGGTTCAAAGCCATGAGGTGAAGAATGGAATTCTAAGTTTCCTTCCTATTAGAATAGGTAAAAATTCTTCAATTGGACCTTATTCTATTATTCAAAAAGGAAGTATCATCAAAGAAGGATCTGAAGTACAACCCCTGCAAAAGGTTGAAGGAGGCCAACATGTACTCAAACCTGCTAAGCATAATAACGTTAAAGAGAATGCCCTGTTGCTTGTTTCTACCAGCAAAATACAGTCCAATGCCATGTACCATTTTCTGGGGATCTATCTCACTGGCTTTCTCAGCTCCCTTGCTTCAGCTATTGCTTACATCTTGTACATAAGGCTCTTCCAGATACCTGCATCATTCCAACACTTCTCATTTCTTTGTGTATGCGGTGCCTTCCACTGGATCCCATTTACCGTTGTTGCATATGCCACCATGTTTTCTGATGTCCCATCAAATCCCATTGCCTTTACCATTTCATTTACCAGCGCATATCTGCTTCATGGCCTCATACTCACCTCTCTCACTTGTGCTTTGACACGTTTGCTAAAATTCAACCAAAATCAAACCCATTTCAAAACCTGGCTTAGACATCAATTGACCATTTCCTGCCACCATAGATTTGCAAAGCTTCTCTCAGGAACAGAAGCCTTCTGCTTATATTTACGCCTTTTGGGTGCAAAAATTGGCAAACACTGTTCCATCAGAGCCATCAACCCAGTTTCTAACCCTGAGTTAATGTCAATAGGCGATGGTGTCCATCTTGGTGATTTCAGCAAGATAATCACCGGTTTTCACTATTCCAATGGATATGCTTGTGGAAAAGTAGAGGTTCAGGATAATTCAGTTGTGGGGAGTCAAAGCCTAATCCTCCCAGGTTCTGTTGTAGAAAAGAATGTCATTCTAGGTGCACTTTCAGTTGCTCCAATGAATTCTATCCTCCATGAGGGTAGCGTGTATATCGGATCTCAAACCCGAGTTGCAACCAGAAACTCTTCGTATCATTTAGATGAAAGGATAGAGGAGATGGACATGGAGTACAAAAAAGTAGTTGCAAACATGGCTGCAAATTTAGCCGTCACTACTATTAATGTCAAAGCAAGATATTTCCACCGCATTGGTGTTAGTGGAAAGGGACACTTGAAAATCTATGACAAACTTGATGGCAATATTCCACTACACAAGATTTTTTACCCTGGAAAAAGCTACCCTATCATGTTAAGACACAGTAATAGCTTGAGTGCTGATGATGATGCAAGGATTGATGCACGTGGTGCAGCTTTGAGGATTCTTTCTGATGAATCACCAGATTCTAATAACCTGCAGCATGCTTCCCTCATTGACCTGACACTAAAAACTGGCAACGCATTTTATGCTCGCACTCTTGCTGATTTTGCAACCTGGCTTGTGTGTGGACTTCCAGCGAGGGAGGAACTTGTTAAGCGCACCCCACATGTTCGTGATGCAGTGTGGAATTCCCTTAGACATGCAAACTCATACGCTGAATTGCACTACTATTCAAACATTTGCAGGCTTATGCGCTTCACTGATGGACAAGAAATGTACGTGAAGTTTAAGCTAAGACCTATTGACACAAGCATTAGTGAGGACACAGGTAAGGTTGTACCAACTGGGATTCTTCCACCAGAAACGGGTGCAATTCCTAGGGATGAAAAGGACACACGTCCTTTGCTTTTCCTTGCTCAAGATTTTCAACGCCGTGTGAATTCTCCTGGTGGAGTTTGTTATGTGTTTCAATTGCAACTCCGAGCAGTGCCAGAAGATGAAGCCGCAGGTGACATTGCACTGGACTGCACCAAACCATGGGATGAAAATGAGTTCCCTTACATTGATGTTGGAGAGGTAAACATCAATGAGAATCTCTCTACGGAAGAATCAGATAGGCTTGAATTTAACCCTTATCTCAAAAGCCATGAGTTGGATGTGATCCCTGCTACTTCCAACACCCAAAGTGCTTCAATTGATCATGGCCGTTCATTGATCTATGAGATTTGCCAGCACGTTCGTAACAGACAGCCACTCCCAGAATCTTGGAGGAACCTCGTAGAGCAATCTAACGTTAAGGTAGACTTGTCTTGCTGTCCCGTGGCAGCAGCATTGCCCAAAAAGGAGACGACAAAGAAAGTTACAACAACCTTAACCTTGACAAGAACCTGGTACCAGACATTCTCAGCACTTTTCACTCAACCGTTGCTGCAAACTGTTTTGCCTTACACGGTGATGGGTTTAGCAGTTTTTGCTCCTTTGAACTTTCTTGTTAACCTTAAGAACGTTGAGAAACTCCAAGTGCAATGGTTCTTTCCTTTGTTTTGGGTTGTCTCGGGTGTCATGGCTGCACTGGCATGTGTTGTGACCAAATGGGTTCTCGTGGGAAGAAAAAAAGAGGGTGAAACCGTGCCCTTATGGAGCAAAAGGGTAATCATGGATAGCACGTGGCAAGCGATTAGAACCTTGGTTGGGGATTATTTCATGGACATGGCAAGTGGGTCGTTTTTGTTTGTGATGTGGATGAAGTTGATGGGTGCGGACATAGACATGGATGGTGGTGGGGCCTACGTGGACAGCACCGGGGCTATGTTGAACCCTGAAATGGTGACGATTGAGAGAGGGGGTTGTGTGGGAAGAGAGGCATTGCTATTTGGACACATATATGAAGGTGATGAAGGTGGAATGGTGAAGTTTGGGGGAATCAAAATTGGTGAAGATGGGTTTGTGGGAAGTAGAGCTGTGGTCATGCCTGGTGTGCATGTGGAGAATGAGGCCAATCTTTCTGCTTTGTCTCTCGCCATGAAAGGAGAAACAGTTAGGTCAAGATAA 6129 0.4265 MDASELEKDLFSKVETNDYYTTVLKIKGLERMPVGFYYFSEYMEDPSTIGNPVAMQKFYADSNIFLFWSYGNSADIKGPTVTELAIKSIESMGGEVQNIILQRRFKYFPHVSSQDMRNGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMALICKNFANSSDLPVFPYTKSLFPLQTDIQKKEPKELVELPGVQFPNLPALNSYLKHWGTHPITQNRTLYTWLNEGGTVVGKRTYGEQHLNASCIAHKLLTSQKPVIKPGDRVLLVYVPGLDFVDAFFGCLRAKVLPVPVLPPDPMQRGGQALLKIENIAKSCGIVAILSTASYHTAVRAGLVKSLISLTGKNGKYTAQWPKLPWLHTDTWVNNSRNSAVEDVDDQCEPQPGDVCFLQFTSGSTGDAKGVMITHGGLVHNVKLMRSRYKSTSRTVLVSWLPQYHDMGLIGGLFTALVSGGSAVLFSPLTFIKKPLLWLETISKYQATHSAGPNFAFELVVRRLESEKDKLQSLDLSSMIFLMVAAEPVRMKTLKRFLDLTTPFGLSQKVMAPGYGLAENCVFVSCAFGEGCPILVDWQGRVCCGYIHPGDSDVDIIIVDPESGEELEEDGREGEIWISSPSAGIGYWGKEELSQKTFRNKLQNHPGRNYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSADVEKTVESSSEFLRPGCCAVIGVPEEILSAKGISLPDGSDQVGLVVVAEVRDGKTVSKDVIEHIQTRVVEEHGVSVASVKLIKPRTISKTTSGKIKRFECLKQFSDETLNLVPQPILTKKSLLRSFTTGTCREGRTPRAHLVRSSSPLPIPRISNKEIVEHLKRIISDQSGIPVNNISVTDNMSTYGIDSIGVVKATQKLTDFLGVPVAAIDVFTASCIQELANFSENLLLKSQPQLMSNSPHAPEAEIDFTEVVVDVSKSRQWGIRLLQLLALVYISIMLVTPAYLSITAFQSFIPNASESVYGMPWSSYLISLTLAPLSWILCIVSTCLCISFFGNSFLRPNYALTPEISIYSMDFVKWWALYKTQEISSKVLATHLRGTVFLKYWFEMLGARIGSLVLLDTVDITDPSLVSIGDEVAIAEGVLVQSHEVKNGILSFLPIRIGKNSSIGPYSIIQKGSIIKEGSEVQPLQKVEGGQHVLKPAKHNNVKENALLLVSTSKIQSNAMYHFLGIYLTGFLSSLASAIAYILYIRLFQIPASFQHFSFLCVCGAFHWIPFTVVAYATMFSDVPSNPIAFTISFTSAYLLHGLILTSLTCALTRLLKFNQNQTHFKTWLRHQLTISCHHRFAKLLSGTEAFCLYLRLLGAKIGKHCSIRAINPVSNPELMSIGDGVHLGDFSKIITGFHYSNGYACGKVEVQDNSVVGSQSLILPGSVVEKNVILGALSVAPMNSILHEGSVYIGSQTRVATRNSSYHLDERIEEMDMEYKKVVANMAANLAVTTINVKARYFHRIGVSGKGHLKIYDKLDGNIPLHKIFYPGKSYPIMLRHSNSLSADDDARIDARGAALRILSDESPDSNNLQHASLIDLTLKTGNAFYARTLADFATWLVCGLPAREELVKRTPHVRDAVWNSLRHANSYAELHYYSNICRLMRFTDGQEMYVKFKLRPIDTSISEDTGKVVPTGILPPETGAIPRDEKDTRPLLFLAQDFQRRVNSPGGVCYVFQLQLRAVPEDEAAGDIALDCTKPWDENEFPYIDVGEVNINENLSTEESDRLEFNPYLKSHELDVIPATSNTQSASIDHGRSLIYEICQHVRNRQPLPESWRNLVEQSNVKVDLSCCPVAAALPKKETTKKVTTTLTLTRTWYQTFSALFTQPLLQTVLPYTVMGLAVFAPLNFLVNLKNVEKLQVQWFFPLFWVVSGVMAALACVVTKWVLVGRKKEGETVPLWSKRVIMDSTWQAIRTLVGDYFMDMASGSFLFVMWMKLMGADIDMDGGGAYVDSTGAMLNPEMVTIERGGCVGREALLFGHIYEGDEGGMVKFGGIKIGEDGFVGSRAVVMPGVHVENEANLSALSLAMKGETVRSR* 2043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3524 2042 Gene3D - 98 162 IPR036188 -
Gso11g3524 2042 CDD FAAL 210 783 IPR040097 GO:0008610
Gso11g3524 2042 SUPERFAMILY Trimeric LpxA-like enzymes 1306 1440 IPR011004 -
Gso11g3524 2042 Pfam AMP-binding enzyme 236 669 IPR000873 -
Gso11g3524 2042 SUPERFAMILY Trimeric LpxA-like enzymes 1945 2035 IPR011004 -
Gso11g3524 2042 ProSiteProfiles catalase family profile. 1396 2042 IPR018028 GO:0004096|GO:0006979|GO:0020037
Gso11g3524 2042 SUPERFAMILY Trimeric LpxA-like enzymes 1068 1145 IPR011004 -
Gso11g3524 2042 PANTHER AMP-BINDING ENZYME 1 2042 - -
Gso11g3524 2042 Gene3D Hexapeptide repeat proteins 1070 1178 - -
Gso11g3524 2042 Gene3D Hexapeptide repeat proteins 1286 1423 - -
Gso11g3524 2042 Gene3D - 192 663 IPR042099 -
Gso11g3524 2042 Gene3D Catalase core domain 1424 1782 - -
Gso11g3524 2042 SUPERFAMILY Heme-dependent catalase-like 1457 1774 IPR020835 GO:0020037
Gso11g3524 2042 SUPERFAMILY ACP-like 830 920 IPR036736 -
Gso11g3524 2042 ProSiteProfiles Carrier protein (CP) domain profile. 833 907 IPR009081 -
Gso11g3524 2042 Gene3D - 664 791 IPR045851 -
Gso11g3524 2042 PANTHER AMINE OXIDASE 1 2042 - -
Gso11g3524 2042 ProSitePatterns Phosphopantetheine attachment site. 862 877 IPR006162 -
Gso11g3524 2042 Gene3D - 832 902 IPR036736 -
Gso11g3524 2042 SUPERFAMILY Acetyl-CoA synthetase-like 218 790 - -
Gso11g3524 2042 Pfam Phosphopantetheine attachment site 839 902 IPR009081 -
Gso11g3524 2042 ProSitePatterns Putative AMP-binding domain signature. 391 402 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3524 Gso-Chr11 51069750 51076530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3524 387 702 Monolignol Biosynthesis Gene Families AT1G20480 26.814 8.76e-20 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3524 - - gsj:114374875 4017.62