Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3515 ATGGATTCTTCTGCTGTTGTGGGTAGCACAATTTCAGAGCCTCATAGTGATATGGAATTTGAATCTCATGAAGCGGCATATGCATTTTACAAAGAATATGCTAAGTCTGCAGGGTTTGGCACTGCTAAGTTGAGCAGTCGGAGGTCTAGGGCATCAAAAGAATTTATTGATGCCAAATTTTCATGTATAAGATATGGTAATAAGCAGCAATCTGATGATGCAATTAATCCACGCCCGTCTCCAAAAATTGGTTGTAAAGCAAGCATGCATGTGAAGAGAAGGCAAGATGGTAAATGGTATGTCTATAGCTTTGTGAAGGAGCATAATCATGAGCTTTTACCAGCTCAAGCTCATTTTTTTCGGAGTCACAGGAGTTCTGATCCACTAAGTAATGATGTTCGAATGCGAAGGCGCAAGAACTCAAATGCAGTTTCTAAATTATTTACTGCATATCAGAATGTTGATTGCTTAGAGAACTTTGTGAAACATCAACACGATAAAGGACGAAGTTTGGTTCTAGAAGCAGGACATGCTCACTTGCTTCTTGAACTCTTCATGCACATGCAGGAAGAGAATCCAAAATTCTTCTATGCAGTTGATTTGAATGAAGAACATCGACTAAGAAATGTGTTCTGGGTTGATGCTAAAGGCTTGGAAGATTTTACTTATTTTTCTGACGTTGTTTCTTTTGACACAACATATTTTACGAGCAAATATAAAATACCATTGGTAATGTTCATTGGAGTAAACCATCATATTCAACCAACATTGCTTGGCTGTGCATTGATTGCTGATGAGACAATATATACTTTTGCCTGGTTACTGCAAACATGGCTCATAGCAATGGGAGAACGAGCTCCACAAGTGCTTCTCACTGACCAAAACGAGGCTATTAAAGCAGCTGTTGCTGCTTTTCTTCCAGGAACACGTCATTGTTTTTGTTTGTGGCATATTTTGGAAATGATACCAAAACAACTGGAATTTTTTGGTGCGTGGCATGATAGCTTTTTGGAAAAATTTAACAACTGTATATACAAATCATGGACAGAGGAGCAATTTGATAAGAAATGGTGGGAGTTGGTTGACGACTTTAACCTTAGAGATGTTGATTGGGTTCAATCCTTATATGATGACCGTACATGTTGGGCACCAACTTTTATGAAAGATATTTCCTTTGCTGGCTTGTCTACTAGTTCACGCTCTGAAAGTTTAAATTCATTGTTTGACAACTATATCCAAATTGATACTTCATTGAGAGCATTTATAGAACAGTATAGAGTGATTCTTGAAGATAGGCATGAAGAGGAAGCCAAAGCAAATTTTGATGCTTGGCATGAAACACCTGACCTGAAGTCTCCTTCCCCTTTTGAAAAGCAAATGTTGTCAGTTTACACACATGAAATTTTTAGAAAGTTCCAGGTTGAGGTTTTGGGTGCAGCTGCTTGCCATCTTAAGAAAGAAAATGATGGTGTGACTAGTGCTTATACTGTGAAAGACTTTGAAAATAATCAAAACTATATGGTAGAATGGAACACATCAACCTCAGATATATGTTGTTCATGTCATTTGTTTGAATATAAAGGTTATCTCTGTAGACATGCTATTGTTGTTCTACAAATGTCTGGTGTTTTCAGCATTCCACCAAAGTATATATTGCAAAGATGGACAAATGCTGCTATGAGCAGGCATCCTATTGGTGAAAAATTGGAAGAGGTTCAATCAAAGGTGCGACGATTCAATGATTTGTGTAGACGGGCAATAATATTAGGCGAAGAAGGTTCTTTGTCACAAGAAAGTTACTATATGGCTTTAGGTGCCATAAGTGAGGCACTAAAGCAATGTGCAAATTTGAACAACTCTGTTGAGAATGGTATGAGACCTGATGCCTCAAGTACCCATGTTGTTTGTAATGTTGAAGAAGAATATCATTCTATTATTACATCTAAAAATAAGGTCCCTGATCCAAAACCGAATACTGGAAAGAAAGCTGTGAGGTCTGGTATGGCTGGTAGGAGTCTAGGAAGTGTTGAAAACAGTGAAGGAAATAAAGGAAAGGTATCTCAGGTCGAAGTAGGTAGTGGCAAAGATGGTTTTCAACAAATGGAGCTGACTGATCCAAGATCACACAATGTCATGCCAATGCAGTTTCACAGCGTGGTACCTGCTCTGTTCCATAATGTTTCGTCACCATTTCATACTGCACCTTCAACTCATTTGCACGAGAATCGTTAG 2232 0.3826 MDSSAVVGSTISEPHSDMEFESHEAAYAFYKEYAKSAGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDAINPRPSPKIGCKASMHVKRRQDGKWYVYSFVKEHNHELLPAQAHFFRSHRSSDPLSNDVRMRRRKNSNAVSKLFTAYQNVDCLENFVKHQHDKGRSLVLEAGHAHLLLELFMHMQEENPKFFYAVDLNEEHRLRNVFWVDAKGLEDFTYFSDVVSFDTTYFTSKYKIPLVMFIGVNHHIQPTLLGCALIADETIYTFAWLLQTWLIAMGERAPQVLLTDQNEAIKAAVAAFLPGTRHCFCLWHILEMIPKQLEFFGAWHDSFLEKFNNCIYKSWTEEQFDKKWWELVDDFNLRDVDWVQSLYDDRTCWAPTFMKDISFAGLSTSSRSESLNSLFDNYIQIDTSLRAFIEQYRVILEDRHEEEAKANFDAWHETPDLKSPSPFEKQMLSVYTHEIFRKFQVEVLGAAACHLKKENDGVTSAYTVKDFENNQNYMVEWNTSTSDICCSCHLFEYKGYLCRHAIVVLQMSGVFSIPPKYILQRWTNAAMSRHPIGEKLEEVQSKVRRFNDLCRRAIILGEEGSLSQESYYMALGAISEALKQCANLNNSVENGMRPDASSTHVVCNVEEEYHSIITSKNKVPDPKPNTGKKAVRSGMAGRSLGSVENSEGNKGKVSQVEVGSGKDGFQQMELTDPRSHNVMPMQFHSVVPALFHNVSSPFHTAPSTHLHENR* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3515 743 MobiDBLite consensus disorder prediction 672 686 - -
Gso11g3515 743 Pfam SWIM zinc finger 512 540 IPR007527 GO:0008270
Gso11g3515 743 PANTHER PROTEIN FAR1-RELATED SEQUENCE 4 2 707 - -
Gso11g3515 743 SMART 26again6 517 544 IPR006564 GO:0008270
Gso11g3515 743 MobiDBLite consensus disorder prediction 649 698 - -
Gso11g3515 743 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 707 IPR031052 GO:0006355
Gso11g3515 743 Pfam FAR1 DNA-binding domain 29 114 IPR004330 -
Gso11g3515 743 Pfam MULE transposase domain 227 319 IPR018289 -
Gso11g3515 743 ProSiteProfiles Zinc finger SWIM-type profile. 506 542 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3515 Gso-Chr11 50995631 51000038 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gso11g3515 MULE 4.9e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3515 - - gmx:100805273 1511.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0291 15 2651274 2655349 Gso11g3515 11 50995631 51000038 GST