Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3504 ATGATGGTTGATAAACAACGGTACCCGACAATAGAACAAAAGCTTGCTGGCCAGCTTCACTTGAGATCCAACTCCAACCTTTCCCCACATGTTGGAACTTGTTACGAACGTCTGAAAAGACCAGCTCTGTTTCAGCAACGATTTTCACTAAAAAATCATTCAAATGCAGGGTTGCTGTGCCCTCTCGTGCCTGCATGGAAAGCCACTAGCCATCTGCATTCTGTAGGTTCAGCTGCTTCACCAGTGTTGGTCCCATCCCCATCAGAGAAAAACTTTGCAAGCTTTGCCACTGATTTTCTCATGGGTGGAGTTTCTGCTGCAGTGTCCAAGACTGCAGCTGCTCCTATTGAACGCATAAAGCTTCTGATTCAAAATCAAGATGAGATGATCAAGGCCGGTCGGCTCTCCGAACCCTACAAGGGCATTGGAGATTGCTTTGGCAGAACAACGAAAGACGAGGGGTTTGTTTCATTGTGGAGAGGGAACACTGCTAACGTTATCCGTTACTTCCCAACACAGGCCCTGAACTTTGCATTTAAAGACTACTTTAAGAAGCTATTTAACTTCAAGAAAGACAGGGATGGGTACTGGAAATGGTTTGCAGGGAACATGGCATCTGGTGCAGCAGCAGGAGCTTTATCATCGGTGTTTGTTTATTCTTTGGATTACGCTCGAACCCGCCTTGCCAATGATGCTAAAGCTGGAAAGACGGGTGGAGAGAGACAATTCAATGGTTTGGTCGATGTGTACAGGAAGACTCTTCGATCGGACGGTGTTGCTGGCCTCTACCGTGGCTTCAACGTTTCTTGTGTTGGAATCATTGTCTACCGTGGTTTGTACTTTGGAATGTATGATTCTCTGAAACCAGTACTCTTGGTAGGAACTTTGCAGGATAGTTTCTTGGCTAGCTTTGCTCTGGGGTGGATGGTTACTATTGGTGCTAGCATTGCCTCGTACCCCTTAGATACGGTTCGCAGAAGAATGATGATGACATCTGGTGAAGCTGTCAAGTACAAGAGCTCTTTCGATGCATTCTCGCAAATTGTGAAGAATGAAGGTTCAAAATCTTTGTTCAAGGGCGCGGGAGCAAACATCCTTCGTGCAGTTGCTGGTGCTGGTGTGCTTTCTGGTTATGACAAACTTCAGGTACTTGTCCTGGGAAAGAAGTATGGTTCTGGTGGGGCTTAA 1188 0.463 MMVDKQRYPTIEQKLAGQLHLRSNSNLSPHVGTCYERLKRPALFQQRFSLKNHSNAGLLCPLVPAWKATSHLHSVGSAASPVLVPSPSEKNFASFATDFLMGGVSAAVSKTAAAPIERIKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTTKDEGFVSLWRGNTANVIRYFPTQALNFAFKDYFKKLFNFKKDRDGYWKWFAGNMASGAAAGALSSVFVYSLDYARTRLANDAKAGKTGGERQFNGLVDVYRKTLRSDGVAGLYRGFNVSCVGIIVYRGLYFGMYDSLKPVLLVGTLQDSFLASFALGWMVTIGASIASYPLDTVRRRMMMTSGEAVKYKSSFDAFSQIVKNEGSKSLFKGAGANILRAVAGAGVLSGYDKLQVLVLGKKYGSGGA* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3504 395 Gene3D Mitochondrial carrier domain 96 391 IPR023395 -
Gso11g3504 395 ProSiteProfiles Solute carrier (Solcar) repeat profile. 298 384 IPR018108 -
Gso11g3504 395 SUPERFAMILY Mitochondrial carrier 91 380 IPR023395 -
Gso11g3504 395 ProSiteProfiles Solute carrier (Solcar) repeat profile. 198 290 IPR018108 -
Gso11g3504 395 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 395 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso11g3504 395 Pfam Mitochondrial carrier protein 94 190 IPR018108 -
Gso11g3504 395 Pfam Mitochondrial carrier protein 299 385 IPR018108 -
Gso11g3504 395 Pfam Mitochondrial carrier protein 197 291 IPR018108 -
Gso11g3504 395 PANTHER ADP,ATP CARRIER PROTEIN, MITOCHONDRIAL 2 395 - -
Gso11g3504 395 PRINTS Adenine nucleotide translocator signature 95 107 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso11g3504 395 PRINTS Adenine nucleotide translocator signature 139 160 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso11g3504 395 PRINTS Adenine nucleotide translocator signature 172 184 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso11g3504 395 PRINTS Adenine nucleotide translocator signature 198 211 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso11g3504 395 PRINTS Adenine nucleotide translocator signature 303 319 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso11g3504 395 ProSiteProfiles Solute carrier (Solcar) repeat profile. 93 186 IPR018108 -
Gso11g3504 395 PRINTS Mitochondrial carrier protein signature 98 111 IPR002067 GO:0055085
Gso11g3504 395 PRINTS Mitochondrial carrier protein signature 111 125 IPR002067 GO:0055085
Gso11g3504 395 PRINTS Mitochondrial carrier protein signature 161 181 IPR002067 GO:0055085
Gso11g3504 395 PRINTS Mitochondrial carrier protein signature 213 231 IPR002067 GO:0055085
Gso11g3504 395 PRINTS Mitochondrial carrier protein signature 263 281 IPR002067 GO:0055085
Gso11g3504 395 PRINTS Mitochondrial carrier protein signature 307 329 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3504 Gso-Chr11 50914273 50917549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3504 2 395 Antiporters AT5G13490 73.924 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3504 K05863 - gmx:100800843 764.222