Home
Resource
Genome
JBrowse
Transcriptome
Metabolomics
Pan-genome
External database links
Search
Annotation
Pathway
Duplication type
Transposable elements
Regulatory proteins (RPs)
N6-methyladenosine (m6A)
Browse
Syn-based OGs
Gene-families
Synteny
Syn-Blocks
Syn-Dotplots
Deco-Alignments
Pvu_syntenic
Vvi_syntenic
WGDs- Genes
Anc-Genome
Anc-Reference
Tools
All tools
Genome browsing and annotation
Jbrowse
ShinyCircos
Interproscan
iTAK
Dupgen finder
Homology search and alignment
Bl-match
Seq-fatch
Blast
Diamond
Bi-visualazition
Synteny inference
MCScanX
ColinearScan
Synviso
Syn-blocks-stat
B-Dotter
BB-Dotter
BK-Dotter
Evaluation of nucleotide mutation
ParaAT
KaKs calculator
NG-KaKs-Cal
Paleogenome fractionation
Paleo-gene identifier
Syn-deco generator
Paleo-gene_RI
Paleo-gene_RII
P-index-calculator
Multi-syn-phytre
Gene structure and evolution
Codonw
Cpgfinder
MEME
GSDS
Hmmer
Pfam
FastTree
IQ-Tree2
Multigene-align
Heatmap
Lollipop
Gmapping
GF-Circos
Other auxiliary tools
GC-calculator
Seqlenth-calculator
Genstr-counter
Gam-Calculator
SAF-converter
BDI-finder
BDI-deduplicator
BDI-extractor
BDI-combiner
Seq-corrector
Subtree-splitter
Sptaxon-accessor
SS-extractor
WinO-WGDI
Block_run
KaKs calculate
Blast dotplot
Ks dotplot
Block_info
Correspondence
Statistics
Overview
Phylogenetic tree
Identification of polyploidy
Bar chart
Heatmap
Gene function annotation
Functional genes
Transcription factor
N6-methyladenosine(m6A)
Bar chart
Heatmap
Transposable elements
Documentation
Platform Manual
Pipeline flow examples
L-Wikipedia
Species introduce
Literatures
Common pests
Diseases
Economic value
Planting methods
About
Submission
Community
Contact
Gene search
Sequence information
Show
10
25
50
100
entries
Search:
Select
Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Gso11g3500
ATGAAGTACACTGGGGAAGCTTTGGGAAGAGATCTTGAGAACGTGAGGAAGTACTACGGGAGTGGAAAAACAAAGGAAGCATCATGGAGAGAATCACAGCTTAAAGGGTTGCACAATTTTCTCGTTGAAAAAGAGGAAGAAATTTTGAGGGCCCTCAAGCATGATTTGGGGAAGCATTACGTGGAGGCTTTTAGAGACGAGGTTGGAACATTAATGAAGACCTTAAACTTGGCAAGCAAGTCTTTGAAAAATTGGATGGCAGGCAAAGAGGCAAAGCTGCCACGAATAGCACTGCTTTCAAGTGCAGAGATAGTTCCTGAGCCACTTGGTCTTGTTCTCATAATCTCATCATGGAACTTTCCCTTTGGACTTTCCTTGGAGCCACTGATAGGAGCAATAGCTGCTGGAAACAGTGTGGTTCTAAAGCCTTCAGAGTTGTCCCCTACTTGCTCTTCTCTTTTAGCCACTTTCCTCCCAACTTACTTGGACAATAATGCCATTAAGGTCATCCAAGGTGGACCAGAAGTGGGGGAGCTACTCTTGCAGCAAAGATGGGACAAGATTTTCTTCACAGGAAGTGCAAGGGTAGGGCGGATTGTTATGTCTGCAGCAGCTGTGCATCTGACGCCTGTGACTTTGGAGTTAGGTGGAAAATGCCCAGCCATAATTGATTCTCTTTCTTCTTCTTGGGACAAAGAGGTGGCTGTGAAGCGAATTTTGGTGGCAAAATTTGGGGCTTGTGGGGGACAGGCATGCATAGCAATCGATTATGTCCTTGTGGAGAAGAGCTTCAGTTCTACATTGGTGACATTAATGAAGGAATGGATTAAGAAACTGTTTGGAGAAAACCCCAAGGTGTCCAACACTATTGCAAGGATAGTTAATAAAAATCATTTCATGAGACTCAAGAATCTTCTCACTGAGCCAAGGGTCAAAGAATCGGTGGTTTATGGTGGTTCAATGGATGAAAATGACTTATTTATTGAACCGACAATATTGCTGGATCCGCCACTTGATTCAGCAATCATGGCTGAAGAAATCTTTGGCCCTGTACTTCCAATTATCACCGTGGAGAAGATTGAAGAGAGTGTTGAGTTCATAAGCTCAAGGCCTAAAGCTTTAGCTATTTATGCCTTCACGAAAAACCAGACTCTGCAGAGAAGATTGGTATCTGAAACATCATCCGGAAGTCTTGTATTCAACGATGCAATTCTACAATACGTAGCGGATACCCTACCATTTGGAGGAGTTGGTGAATGTGGGTTTGGCAAGTACCATGGAAAGTTCTCCTTTGATGCGTTCAGTCACCATAAGGCTGTGGCTAGAAGAAGTTACTTGACTGATTTTTGGTTCAGGTTCCCTCCATGGACTCTTAATAAGCTCCAACTACTTGAGGTGTCTTACAATTTAGACTACCTTGGAATACTTCTAGTTCTGCTCGGCTTAAAGAAATCAAAACGGCCACTATTTCAGGCTTGTAATTGA
1485
0.4337
MKYTGEALGRDLENVRKYYGSGKTKEASWRESQLKGLHNFLVEKEEEILRALKHDLGKHYVEAFRDEVGTLMKTLNLASKSLKNWMAGKEAKLPRIALLSSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAIAAGNSVVLKPSELSPTCSSLLATFLPTYLDNNAIKVIQGGPEVGELLLQQRWDKIFFTGSARVGRIVMSAAAVHLTPVTLELGGKCPAIIDSLSSSWDKEVAVKRILVAKFGACGGQACIAIDYVLVEKSFSSTLVTLMKEWIKKLFGENPKVSNTIARIVNKNHFMRLKNLLTEPRVKESVVYGGSMDENDLFIEPTILLDPPLDSAIMAEEIFGPVLPIITVEKIEESVEFISSRPKALAIYAFTKNQTLQRRLVSETSSGSLVFNDAILQYVADTLPFGGVGECGFGKYHGKFSFDAFSHHKAVARRSYLTDFWFRFPPWTLNKLQLLEVSYNLDYLGILLVLLGLKKSKRPLFQACN*
495
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Annotation information
Show
10
25
50
100
entries
Search:
Select
Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Gso11g3500
494
Gene3D
Aldehyde Dehydrogenase; Chain A, domain 1
16
438
IPR016162
GO:0016491
Gso11g3500
494
PANTHER
ALDEHYDE DEHYDROGENASE
6
492
-
-
Gso11g3500
494
SUPERFAMILY
ALDH-like
12
457
IPR016161
GO:0016491
Gso11g3500
494
PANTHER
ALDEHYDE DEHYDROGENASE
6
492
IPR012394
GO:0006081
Gso11g3500
494
Gene3D
Aldehyde Dehydrogenase; Chain A, domain 2
217
420
IPR016163
GO:0016620
Gso11g3500
494
PIRSF
ALDH
4
476
IPR012394
GO:0006081
Gso11g3500
494
Pfam
Aldehyde dehydrogenase family
25
440
IPR015590
GO:0016491
Showing 1 to 7 of 7 entries
Previous
1
Next
Select All
Download Selected Rows
Duplication type information
Show
10
25
50
100
entries
Search:
Select
Gene
Chromosome
Start
End
Duplicated_type
Gso11g3500
Gso-Chr11
50865925
50869562
Dispersed/Wgd
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Functional genes information
Show
10
25
50
100
entries
Search:
Select
Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Gso11g3500
1
484
Aldehyde Dehydrogenase Gene Family
AT4G36250
53.926
0.0
566
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Pathway information
Show
10
25
50
100
entries
Search:
Select
Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Gso11g3500
K00128
-
gmx:100798020
958.747
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Event-related genes
Show
10
25
50
100
entries
Search:
Select
Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Gso15g0305
15
2765996
2770366
Gso11g3500
11
50865925
50869562
GST
Gso11g3500
11
50865925
50869562
Gso12g0475
12
4233951
4237116
PCT
Gso11g3500
11
50865925
50869562
Gso11g1132
11
10203251
10206984
PCT
Gso12g0475
12
4233951
4237116
Gso11g3500
11
50865925
50869562
PCT
Gso11g1132
11
10203251
10206984
Gso11g3500
11
50865925
50869562
PCT
Showing 1 to 5 of 5 entries
Previous
1
Next
Select All
Download Selected Rows