Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3500 ATGAAGTACACTGGGGAAGCTTTGGGAAGAGATCTTGAGAACGTGAGGAAGTACTACGGGAGTGGAAAAACAAAGGAAGCATCATGGAGAGAATCACAGCTTAAAGGGTTGCACAATTTTCTCGTTGAAAAAGAGGAAGAAATTTTGAGGGCCCTCAAGCATGATTTGGGGAAGCATTACGTGGAGGCTTTTAGAGACGAGGTTGGAACATTAATGAAGACCTTAAACTTGGCAAGCAAGTCTTTGAAAAATTGGATGGCAGGCAAAGAGGCAAAGCTGCCACGAATAGCACTGCTTTCAAGTGCAGAGATAGTTCCTGAGCCACTTGGTCTTGTTCTCATAATCTCATCATGGAACTTTCCCTTTGGACTTTCCTTGGAGCCACTGATAGGAGCAATAGCTGCTGGAAACAGTGTGGTTCTAAAGCCTTCAGAGTTGTCCCCTACTTGCTCTTCTCTTTTAGCCACTTTCCTCCCAACTTACTTGGACAATAATGCCATTAAGGTCATCCAAGGTGGACCAGAAGTGGGGGAGCTACTCTTGCAGCAAAGATGGGACAAGATTTTCTTCACAGGAAGTGCAAGGGTAGGGCGGATTGTTATGTCTGCAGCAGCTGTGCATCTGACGCCTGTGACTTTGGAGTTAGGTGGAAAATGCCCAGCCATAATTGATTCTCTTTCTTCTTCTTGGGACAAAGAGGTGGCTGTGAAGCGAATTTTGGTGGCAAAATTTGGGGCTTGTGGGGGACAGGCATGCATAGCAATCGATTATGTCCTTGTGGAGAAGAGCTTCAGTTCTACATTGGTGACATTAATGAAGGAATGGATTAAGAAACTGTTTGGAGAAAACCCCAAGGTGTCCAACACTATTGCAAGGATAGTTAATAAAAATCATTTCATGAGACTCAAGAATCTTCTCACTGAGCCAAGGGTCAAAGAATCGGTGGTTTATGGTGGTTCAATGGATGAAAATGACTTATTTATTGAACCGACAATATTGCTGGATCCGCCACTTGATTCAGCAATCATGGCTGAAGAAATCTTTGGCCCTGTACTTCCAATTATCACCGTGGAGAAGATTGAAGAGAGTGTTGAGTTCATAAGCTCAAGGCCTAAAGCTTTAGCTATTTATGCCTTCACGAAAAACCAGACTCTGCAGAGAAGATTGGTATCTGAAACATCATCCGGAAGTCTTGTATTCAACGATGCAATTCTACAATACGTAGCGGATACCCTACCATTTGGAGGAGTTGGTGAATGTGGGTTTGGCAAGTACCATGGAAAGTTCTCCTTTGATGCGTTCAGTCACCATAAGGCTGTGGCTAGAAGAAGTTACTTGACTGATTTTTGGTTCAGGTTCCCTCCATGGACTCTTAATAAGCTCCAACTACTTGAGGTGTCTTACAATTTAGACTACCTTGGAATACTTCTAGTTCTGCTCGGCTTAAAGAAATCAAAACGGCCACTATTTCAGGCTTGTAATTGA 1485 0.4337 MKYTGEALGRDLENVRKYYGSGKTKEASWRESQLKGLHNFLVEKEEEILRALKHDLGKHYVEAFRDEVGTLMKTLNLASKSLKNWMAGKEAKLPRIALLSSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAIAAGNSVVLKPSELSPTCSSLLATFLPTYLDNNAIKVIQGGPEVGELLLQQRWDKIFFTGSARVGRIVMSAAAVHLTPVTLELGGKCPAIIDSLSSSWDKEVAVKRILVAKFGACGGQACIAIDYVLVEKSFSSTLVTLMKEWIKKLFGENPKVSNTIARIVNKNHFMRLKNLLTEPRVKESVVYGGSMDENDLFIEPTILLDPPLDSAIMAEEIFGPVLPIITVEKIEESVEFISSRPKALAIYAFTKNQTLQRRLVSETSSGSLVFNDAILQYVADTLPFGGVGECGFGKYHGKFSFDAFSHHKAVARRSYLTDFWFRFPPWTLNKLQLLEVSYNLDYLGILLVLLGLKKSKRPLFQACN* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3500 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 438 IPR016162 GO:0016491
Gso11g3500 494 PANTHER ALDEHYDE DEHYDROGENASE 6 492 - -
Gso11g3500 494 SUPERFAMILY ALDH-like 12 457 IPR016161 GO:0016491
Gso11g3500 494 PANTHER ALDEHYDE DEHYDROGENASE 6 492 IPR012394 GO:0006081
Gso11g3500 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 420 IPR016163 GO:0016620
Gso11g3500 494 PIRSF ALDH 4 476 IPR012394 GO:0006081
Gso11g3500 494 Pfam Aldehyde dehydrogenase family 25 440 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3500 Gso-Chr11 50865925 50869562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3500 1 484 Aldehyde Dehydrogenase Gene Family AT4G36250 53.926 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3500 K00128 - gmx:100798020 958.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0305 15 2765996 2770366 Gso11g3500 11 50865925 50869562 GST
Gso11g3500 11 50865925 50869562 Gso12g0475 12 4233951 4237116 PCT
Gso11g3500 11 50865925 50869562 Gso11g1132 11 10203251 10206984 PCT
Gso12g0475 12 4233951 4237116 Gso11g3500 11 50865925 50869562 PCT
Gso11g1132 11 10203251 10206984 Gso11g3500 11 50865925 50869562 PCT