Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3481 ATGATGAATGCTACTAATGATGAAGAGTCTTGCTTGGACAAGAGTGTCCTGAGCTACATAAAGCAAATGCTGATGGAAGACGACACCGAGGAGAGGTACAGTATGTTCCATGATTCCTTAGCCCTCCAACACACTGAGAGATCATTTTTGGAGGCTATCAATCACAACTATCCTTCTCCTTCTTATTCTTCTTCCACACACTATCATCTTGACAACTACCCCAGCGTGGAGAGCCCTGAGCCATGTCTCTCTGCTTGCTCCGCTGATAACATTACTTTTAGCGCTTCCAGTAGTTGCGCTAGTAACAATACTACCAGCTCCTCTGAGTTTCCCTTGAGAAGCCTTTACCCTCTACTTCCTGACACTACTGATGAATTTGTTTTCCACTCAAATTCCACCCAATCTACCATCAATACTCCCTTTGGATTCTTCGACAATCCCCTCGCTGAAATTTTTGAGAGACGTGTAGACCTAGGTACTCTGTTCCTTCCTGCCAACACACCTTTTTCCTCTTCTTTCACAAAGGTTCCTCATGTTGTAATTAAGACAGAAGCAGAAGAAGGAGATCATTTTCTGACAGGAAGGAAACAAAGGGAGCGGGAAGAGTATGAAGCTGCAGATGGGAGAAGCAGGAAGCAATCAGCAGCACATATGGACGAGAGTGAGCTATCCGAATTGTTTGATAAAGTGGTTCTAGGCACTGACTTAAGAAAACGGGTACCTCCTAACACAACCCATAAAACAACAATATTAACAAACATGTTGTATGGTGGAGATGTCTGGGAAAATGATGACCAAGTTGTGGATCTGAGGACACTGTTGATGCTATGTGCACAAGCCATTGCTTCTGATAATCCTTCATCTGCTAAGCAGTTGGTAAAACAGATTATGCAGCATTCTTCTCCAACATGCAATGAGACTCAGAGGCTTGCACATTACTTTGGAAATGCACTTGAAGCACGCTTGGATGGAACAGGCTACAAGGTTTGTAGTGCTCTATCATCCAAAAGAACCTCTGCCAAAGACATGATAAAAGCTTACCATGTATACGCTTCAGTGTGCCCCTTTGAAAAGCTAGCAATCATTTTTGCCAACAATTCAATTTGGAATCCAAGTGTGGATGCAAAAGCAATTCACATCATAGACTTTGGCATCCGCTATGGCTTCAAATGGCCTGCACTTATCAGCCGTCTATCAAGACGTTCTGGTGGGCCACCCAAGCTACGAATCACGGGGATAGATGTGCCACAACCTGGTTTAAGGCCACAAGAGAGGGTGCTCGAGACAGGGCGTAGACTTGCAAATTTTTGCAAGCGTTTCAATGTTCCATTTGAGTTCAATGCTATTGCACAGAGATGGGACACCATCAGAGTTGAAGACCTCAAGATAGAGCCAAACGAATTTGTAGCTGTGAACTGCTTGTTTCAGTTTGAGCATCTGCTTGACGAGACAGTGGTGTTGAATAATTCCAGGGATGCTGTTCTGAGGTTGATTAAGAATGCAAATCCAGACATATTTGTGCATGGCATTGTCAACGGATCCTATGATGTACCATTCTTTGTGTCACGGTTCCGGGAGGCTCTCTTTCATTACACTGCATTGTTTGACATGCTTGACACCAACGTTGCTCGTCAAGATCCCATGAGGTTGATGTTTGAGAAGGAGTTGTTTGGACGGGAGATAGTGAACATCATAGCTTGCGAAGGTTTTGAGAGGGTTGAGAGACCACAAACATACAAGCAATGGCAGCTTCGGAACATGAGAAATGGGTTTAGGCTGCTTCCTCTGGATCATCGAATCATTGGCAAATTAAAGGATAGGTTGAGAGATGATGCGCACAACAATAATTTCTTGCTTGAGGTTGATGGCGACTGGGTGCTACAAGGTTGGAAGGGTCGAATTCTATATGCCTCCTCTTGTTGGGTACCTGCATAG 1935 0.4419 MMNATNDEESCLDKSVLSYIKQMLMEDDTEERYSMFHDSLALQHTERSFLEAINHNYPSPSYSSSTHYHLDNYPSVESPEPCLSACSADNITFSASSSCASNNTTSSSEFPLRSLYPLLPDTTDEFVFHSNSTQSTINTPFGFFDNPLAEIFERRVDLGTLFLPANTPFSSSFTKVPHVVIKTEAEEGDHFLTGRKQREREEYEAADGRSRKQSAAHMDESELSELFDKVVLGTDLRKRVPPNTTHKTTILTNMLYGGDVWENDDQVVDLRTLLMLCAQAIASDNPSSAKQLVKQIMQHSSPTCNETQRLAHYFGNALEARLDGTGYKVCSALSSKRTSAKDMIKAYHVYASVCPFEKLAIIFANNSIWNPSVDAKAIHIIDFGIRYGFKWPALISRLSRRSGGPPKLRITGIDVPQPGLRPQERVLETGRRLANFCKRFNVPFEFNAIAQRWDTIRVEDLKIEPNEFVAVNCLFQFEHLLDETVVLNNSRDAVLRLIKNANPDIFVHGIVNGSYDVPFFVSRFREALFHYTALFDMLDTNVARQDPMRLMFEKELFGREIVNIIACEGFERVERPQTYKQWQLRNMRNGFRLLPLDHRIIGKLKDRLRDDAHNNNFLLEVDGDWVLQGWKGRILYASSCWVPA* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3481 644 ProSiteProfiles GRAS family profile. 261 642 IPR005202 -
Gso11g3481 644 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 12 643 - -
Gso11g3481 644 Pfam GRAS domain family 270 641 IPR005202 -
Gso11g3481 644 MobiDBLite consensus disorder prediction 193 220 - -
Gso11g3481 644 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 12 643 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3481 Gso-Chr11 50693637 50696229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3481 16 644 GRAS Transcription Factor Family AT1G07530 46.579 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso11g3481 GRAS 4.7e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3481 - - gmx:100793066 1285.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0328 15 2958002 2960413 Gso11g3481 11 50693637 50696229 GST
Gso11g3481 11 50693637 50696229 Gso12g0513 12 4585233 4588478 PCT
Gso11g3481 11 50693637 50696229 Gso11g1175 11 10554484 10557978 PCT
Gso12g0512 12 4576284 4579092 Gso11g3481 11 50693637 50696229 PCT
Gso11g1174 11 10546910 10549651 Gso11g3481 11 50693637 50696229 PCT