Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3469 ATGGGAAAGGACTTGGTTTCTTCTGACCAGACCACTGTTCAAATTCAGGACAATAATCCAGGATGCATGTGGGGCATGCTTCAAATTCTTGATTACCATCGTTGGCGCGTAAAAAAGGTGTTTCCTCACAAAAGGAGAAAACATGCCACATATAAGAGAAAACCCATTTTGTATGACCAACATGAAGACCAACAACATGGAGTTACAGAAGCAGAATCCCTCCTTGTCGGGCAACATAGCGAAAAATTGCATGCTGCAGGCAGAAGTTCTCCCAAGAATCGCAAAAAGGAACCATGCACTGAGAAAAAGGTTAACAACGAAAACTCCAAAGGCGGTAGAACCATGGACTACTCAAGGAAAAACCAAGTCAGTAATGAGTATGCACTTCATCTGGAGAAAGATGGCAAGACGACAGAAGATGACCTTAACCATAAGCCTATGGAAACAAACAAGCATAACAGAAACATTTCCAATAAATTTGAGAAACATACTGATGTTTTCGAGTTACTTAGAGTGGAGAAGGATTTATTACTCAAATTTCTTCGAGACACAGACTTTGGTGGGAAAAAAGTCCAACAAGCATCCCACATCAATGCAAGATTGACAAAATCTGGGTCATTTCCTTTAGCCTCAACTTCACAGATGAGAAACATAAGCTCTAGGTCCTTAAAACACAAGCAAAACGAAATTTGGGCCCTTCCAAAGGGAGAAAAGTTGCATGCTGGTACTCAAGAATCAAACATGTCAGTGTCCAGTTCTGTGAAAGATAATTCTTATGAGAATCCAATGCCTTTAGCGAGTGATCTTGGTGTGGATAGTACCATGAAACAAAAAGCATTATTTTCTTTAAGGCCTTCTCAGGGATCAAATCACAAAGGTTGGAATCAAGCGGTTCTTCATCATTTCAAAGTTATAAAACAGAAGATAAAACATGCTCTTGCGGAATTCAGAAAAAGCGGTTGCCAAGCTACTTCTGCTGAAGCAATTCACCATAGGGATTCACCTGAATATAGCATGAACAAAAATGAGGAAGAGATCTCACAAAGCTTAGAAGATGGTGTGGTTCAACAATTCAAAAGGAGTAAAAGCTCAAATGAAACTAGAGCTTCTGATTATGATTCCAACAAGCATGATGCTCGCCTCATGCGAAGAACATCCTCTCTGAATGAATCGTTGGATAGATATACTCAGTTGTTTGAGAAAAGCTTCAGCGAAGACACTAAGTGGCAAAGCTCAAAGTCTAAAAGCTTAAAATTGACAAACGAGGATAAGATCCACAAGAATGGGCACACTCCTAGGTTTTCAAGAAGCAATTTGTCTATGCCTAATCTCGAGACTTTAGGCTTCATTCTACAAGATGCACTTTTTGATACAAATGATATAGGGAATAAAGTGGAAGCTTATAATCGTGTTCATAGAAAATCAGTGAGTCTTCCTTTGAAGATAGACAGGTCACTTGATCATTTTAAAGAGGCTGAAATTGTGGAAACAGTAGAAGGGAGTGAGAGAGATGTAAATCCCAGTCTTTTATCAGATAAGATTATGGAGAAAATTGATGAAGAAGTTACCTGTGACCAGAAGGAGGACATGAATGAGCCAGCGGTGGGAGATGGAAGTTTTCCCGAAGAAAAAGAGGAAATGAGTAATATGACTACCTATCTTCGCAAGGAGGTGATGGCAACTCTTGAAACTAGCTTTGAGGACACTAAAACCAGTCATGAAGGTACAAAATTGAATTCACTAAGATCTACATTGGACGAATTGGAGACTGATCTATCATATTCATCTGACAGAAATGCTAGTGTGACAGCTGAAGACACAGACAACACTTCCGATTTCAAATATGTGAAAAATATTCTTGAATTTTCGGGCTACTTGAGAAATGAGCACACTCAGATGCCATACACAGTAGACCAGCCGCTAAAGCCCTCCATATTCAAAGATTTGGATGCAACTTTGCGCCATGAAATTGAACCCTCTGAAGAAGAGACAATCAACCACCAGCTTCTTTTTAACTTAGTTAACGAGGTGCTGCTTGAAATATATGGAAGGTCTCCAACTTACTTCCCAAGACCATTCTCATTCAACCCCCGCCTCCATTCAATGCCTAAAGGGAACTATCTTCTGAATGAAGTATGGAATAGTGTTAATTCATACCTGAACTTGAAACCTGAGCTAGATCAGACACTAGACGATGTTGTCGGTCGGGATTTGGCAAAAGGAAAAGGCTGGATGATCCTTCAAGAGGAAGAGGAGTATGTAGCACTTGAATTAGAGGAAATGATCATGGATGAGTTGTTAGATGAATTTATCTTCTCATGA 2322 0.3971 MGKDLVSSDQTTVQIQDNNPGCMWGMLQILDYHRWRVKKVFPHKRRKHATYKRKPILYDQHEDQQHGVTEAESLLVGQHSEKLHAAGRSSPKNRKKEPCTEKKVNNENSKGGRTMDYSRKNQVSNEYALHLEKDGKTTEDDLNHKPMETNKHNRNISNKFEKHTDVFELLRVEKDLLLKFLRDTDFGGKKVQQASHINARLTKSGSFPLASTSQMRNISSRSLKHKQNEIWALPKGEKLHAGTQESNMSVSSSVKDNSYENPMPLASDLGVDSTMKQKALFSLRPSQGSNHKGWNQAVLHHFKVIKQKIKHALAEFRKSGCQATSAEAIHHRDSPEYSMNKNEEEISQSLEDGVVQQFKRSKSSNETRASDYDSNKHDARLMRRTSSLNESLDRYTQLFEKSFSEDTKWQSSKSKSLKLTNEDKIHKNGHTPRFSRSNLSMPNLETLGFILQDALFDTNDIGNKVEAYNRVHRKSVSLPLKIDRSLDHFKEAEIVETVEGSERDVNPSLLSDKIMEKIDEEVTCDQKEDMNEPAVGDGSFPEEKEEMSNMTTYLRKEVMATLETSFEDTKTSHEGTKLNSLRSTLDELETDLSYSSDRNASVTAEDTDNTSDFKYVKNILEFSGYLRNEHTQMPYTVDQPLKPSIFKDLDATLRHEIEPSEEETINHQLLFNLVNEVLLEIYGRSPTYFPRPFSFNPRLHSMPKGNYLLNEVWNSVNSYLNLKPELDQTLDDVVGRDLAKGKGWMILQEEEEYVALELEEMIMDELLDEFIFS* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3469 773 MobiDBLite consensus disorder prediction 85 109 - -
Gso11g3469 773 MobiDBLite consensus disorder prediction 237 258 - -
Gso11g3469 773 Pfam Domain of unknown function (DUF4378) 612 769 IPR025486 -
Gso11g3469 773 MobiDBLite consensus disorder prediction 83 117 - -
Gso11g3469 773 MobiDBLite consensus disorder prediction 364 378 - -
Gso11g3469 773 PANTHER PROTEIN TRM32 1 773 - -
Gso11g3469 773 MobiDBLite consensus disorder prediction 328 378 - -
Gso11g3469 773 PANTHER PROTEIN TRM32 1 773 IPR044257 -
Gso11g3469 773 MobiDBLite consensus disorder prediction 242 258 - -
Gso11g3469 773 MobiDBLite consensus disorder prediction 349 363 - -
Gso11g3469 773 MobiDBLite consensus disorder prediction 329 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3469 Gso-Chr11 50603231 50608381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3469 165 763 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 27.653 2.35e-38 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3469 - - gmx:100788333 1471.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0340 15 3046466 3051544 Gso11g3469 11 50603231 50608381 GST