Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso11g3469 | ATGGGAAAGGACTTGGTTTCTTCTGACCAGACCACTGTTCAAATTCAGGACAATAATCCAGGATGCATGTGGGGCATGCTTCAAATTCTTGATTACCATCGTTGGCGCGTAAAAAAGGTGTTTCCTCACAAAAGGAGAAAACATGCCACATATAAGAGAAAACCCATTTTGTATGACCAACATGAAGACCAACAACATGGAGTTACAGAAGCAGAATCCCTCCTTGTCGGGCAACATAGCGAAAAATTGCATGCTGCAGGCAGAAGTTCTCCCAAGAATCGCAAAAAGGAACCATGCACTGAGAAAAAGGTTAACAACGAAAACTCCAAAGGCGGTAGAACCATGGACTACTCAAGGAAAAACCAAGTCAGTAATGAGTATGCACTTCATCTGGAGAAAGATGGCAAGACGACAGAAGATGACCTTAACCATAAGCCTATGGAAACAAACAAGCATAACAGAAACATTTCCAATAAATTTGAGAAACATACTGATGTTTTCGAGTTACTTAGAGTGGAGAAGGATTTATTACTCAAATTTCTTCGAGACACAGACTTTGGTGGGAAAAAAGTCCAACAAGCATCCCACATCAATGCAAGATTGACAAAATCTGGGTCATTTCCTTTAGCCTCAACTTCACAGATGAGAAACATAAGCTCTAGGTCCTTAAAACACAAGCAAAACGAAATTTGGGCCCTTCCAAAGGGAGAAAAGTTGCATGCTGGTACTCAAGAATCAAACATGTCAGTGTCCAGTTCTGTGAAAGATAATTCTTATGAGAATCCAATGCCTTTAGCGAGTGATCTTGGTGTGGATAGTACCATGAAACAAAAAGCATTATTTTCTTTAAGGCCTTCTCAGGGATCAAATCACAAAGGTTGGAATCAAGCGGTTCTTCATCATTTCAAAGTTATAAAACAGAAGATAAAACATGCTCTTGCGGAATTCAGAAAAAGCGGTTGCCAAGCTACTTCTGCTGAAGCAATTCACCATAGGGATTCACCTGAATATAGCATGAACAAAAATGAGGAAGAGATCTCACAAAGCTTAGAAGATGGTGTGGTTCAACAATTCAAAAGGAGTAAAAGCTCAAATGAAACTAGAGCTTCTGATTATGATTCCAACAAGCATGATGCTCGCCTCATGCGAAGAACATCCTCTCTGAATGAATCGTTGGATAGATATACTCAGTTGTTTGAGAAAAGCTTCAGCGAAGACACTAAGTGGCAAAGCTCAAAGTCTAAAAGCTTAAAATTGACAAACGAGGATAAGATCCACAAGAATGGGCACACTCCTAGGTTTTCAAGAAGCAATTTGTCTATGCCTAATCTCGAGACTTTAGGCTTCATTCTACAAGATGCACTTTTTGATACAAATGATATAGGGAATAAAGTGGAAGCTTATAATCGTGTTCATAGAAAATCAGTGAGTCTTCCTTTGAAGATAGACAGGTCACTTGATCATTTTAAAGAGGCTGAAATTGTGGAAACAGTAGAAGGGAGTGAGAGAGATGTAAATCCCAGTCTTTTATCAGATAAGATTATGGAGAAAATTGATGAAGAAGTTACCTGTGACCAGAAGGAGGACATGAATGAGCCAGCGGTGGGAGATGGAAGTTTTCCCGAAGAAAAAGAGGAAATGAGTAATATGACTACCTATCTTCGCAAGGAGGTGATGGCAACTCTTGAAACTAGCTTTGAGGACACTAAAACCAGTCATGAAGGTACAAAATTGAATTCACTAAGATCTACATTGGACGAATTGGAGACTGATCTATCATATTCATCTGACAGAAATGCTAGTGTGACAGCTGAAGACACAGACAACACTTCCGATTTCAAATATGTGAAAAATATTCTTGAATTTTCGGGCTACTTGAGAAATGAGCACACTCAGATGCCATACACAGTAGACCAGCCGCTAAAGCCCTCCATATTCAAAGATTTGGATGCAACTTTGCGCCATGAAATTGAACCCTCTGAAGAAGAGACAATCAACCACCAGCTTCTTTTTAACTTAGTTAACGAGGTGCTGCTTGAAATATATGGAAGGTCTCCAACTTACTTCCCAAGACCATTCTCATTCAACCCCCGCCTCCATTCAATGCCTAAAGGGAACTATCTTCTGAATGAAGTATGGAATAGTGTTAATTCATACCTGAACTTGAAACCTGAGCTAGATCAGACACTAGACGATGTTGTCGGTCGGGATTTGGCAAAAGGAAAAGGCTGGATGATCCTTCAAGAGGAAGAGGAGTATGTAGCACTTGAATTAGAGGAAATGATCATGGATGAGTTGTTAGATGAATTTATCTTCTCATGA | 2322 | 0.3971 | MGKDLVSSDQTTVQIQDNNPGCMWGMLQILDYHRWRVKKVFPHKRRKHATYKRKPILYDQHEDQQHGVTEAESLLVGQHSEKLHAAGRSSPKNRKKEPCTEKKVNNENSKGGRTMDYSRKNQVSNEYALHLEKDGKTTEDDLNHKPMETNKHNRNISNKFEKHTDVFELLRVEKDLLLKFLRDTDFGGKKVQQASHINARLTKSGSFPLASTSQMRNISSRSLKHKQNEIWALPKGEKLHAGTQESNMSVSSSVKDNSYENPMPLASDLGVDSTMKQKALFSLRPSQGSNHKGWNQAVLHHFKVIKQKIKHALAEFRKSGCQATSAEAIHHRDSPEYSMNKNEEEISQSLEDGVVQQFKRSKSSNETRASDYDSNKHDARLMRRTSSLNESLDRYTQLFEKSFSEDTKWQSSKSKSLKLTNEDKIHKNGHTPRFSRSNLSMPNLETLGFILQDALFDTNDIGNKVEAYNRVHRKSVSLPLKIDRSLDHFKEAEIVETVEGSERDVNPSLLSDKIMEKIDEEVTCDQKEDMNEPAVGDGSFPEEKEEMSNMTTYLRKEVMATLETSFEDTKTSHEGTKLNSLRSTLDELETDLSYSSDRNASVTAEDTDNTSDFKYVKNILEFSGYLRNEHTQMPYTVDQPLKPSIFKDLDATLRHEIEPSEEETINHQLLFNLVNEVLLEIYGRSPTYFPRPFSFNPRLHSMPKGNYLLNEVWNSVNSYLNLKPELDQTLDDVVGRDLAKGKGWMILQEEEEYVALELEEMIMDELLDEFIFS* | 774 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso11g3469 | 773 | MobiDBLite | consensus disorder prediction | 85 | 109 | - | - | |
Gso11g3469 | 773 | MobiDBLite | consensus disorder prediction | 237 | 258 | - | - | |
Gso11g3469 | 773 | Pfam | Domain of unknown function (DUF4378) | 612 | 769 | IPR025486 | - | |
Gso11g3469 | 773 | MobiDBLite | consensus disorder prediction | 83 | 117 | - | - | |
Gso11g3469 | 773 | MobiDBLite | consensus disorder prediction | 364 | 378 | - | - | |
Gso11g3469 | 773 | PANTHER | PROTEIN TRM32 | 1 | 773 | - | - | |
Gso11g3469 | 773 | MobiDBLite | consensus disorder prediction | 328 | 378 | - | - | |
Gso11g3469 | 773 | PANTHER | PROTEIN TRM32 | 1 | 773 | IPR044257 | - | |
Gso11g3469 | 773 | MobiDBLite | consensus disorder prediction | 242 | 258 | - | - | |
Gso11g3469 | 773 | MobiDBLite | consensus disorder prediction | 349 | 363 | - | - | |
Gso11g3469 | 773 | MobiDBLite | consensus disorder prediction | 329 | 348 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso11g3469 | Gso-Chr11 | 50603231 | 50608381 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso11g3469 | 165 | 763 | TRM (TON1 Recruiting Motif) Superfamily | AT5G02390 | 27.653 | 2.35e-38 | 151 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso11g3469 | - | - | gmx:100788333 | 1471.83 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso15g0340 | 15 | 3046466 | 3051544 | Gso11g3469 | 11 | 50603231 | 50608381 | GST |