Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3461 ATGGAGAGTCACAGTAGTGATGCTGAGGCGGAGAATGTAAGGACTCATTCATCAGTTTCACGGTGGAGTCCTACAAAGGAGCAAATAGACATGTTAGAGAACCTTTACAAGCAGGGAATAAGGACTCCCAGCACTGAGCAAATACAACAGATTACCTCTAGGCTCAGGGCTTATGGTCACATCGAGGGAAAGAATGTCTTCTACTGGTTTCAAAATCACAAAGCTCGCCAAAGACAGAAGCTGATGAAGCAACAAACCATTGCATATTCCAATCGCTTTCTTCATGCCTCCCACCCCATTTGCCAAAATGTTGCCTGCGCTCCATATTGTTTGCAACGGAGTGGATTCAGCTTTTATCCTCAACAATCGAAGGTGCTTGCAAGTGGAGGTATAAGTTCAACTGGGCCTTTAGGCATGCAAAGAATGTTTGATGGCATGCAGAGTAGTGAACACCCGGATTGTAACCGTGAAGTCTTAACTCTCTTTCCTCTTCATCCAACCGGCATTTTGAAAGAAAAAACAACTCATCAAGTGCCTTCCCTTGCTTCAACTTCTGTTGTTGCTGTTGATGAAGATGGTCATCTTGGAAATCAGCCCTTCTTTAATTTTTTCACTACTGAACCAAGGTCGAGAGAGTGA 639 0.4397 MESHSSDAEAENVRTHSSVSRWSPTKEQIDMLENLYKQGIRTPSTEQIQQITSRLRAYGHIEGKNVFYWFQNHKARQRQKLMKQQTIAYSNRFLHASHPICQNVACAPYCLQRSGFSFYPQQSKVLASGGISSTGPLGMQRMFDGMQSSEHPDCNREVLTLFPLHPTGILKEKTTHQVPSLASTSVVAVDEDGHLGNQPFFNFFTTEPRSRE* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3461 212 MobiDBLite consensus disorder prediction 1 24 - -
Gso11g3461 212 SMART HOX_1 17 84 IPR001356 GO:0003677
Gso11g3461 212 Pfam Homeodomain 20 79 IPR001356 GO:0003677
Gso11g3461 212 Gene3D - 13 79 - -
Gso11g3461 212 ProSiteProfiles 'Homeobox' domain profile. 15 80 IPR001356 GO:0003677
Gso11g3461 212 SUPERFAMILY Homeodomain-like 19 84 IPR009057 -
Gso11g3461 212 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 1 208 - -
Gso11g3461 212 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 208 IPR044555 GO:0003700|GO:0099402
Gso11g3461 212 CDD homeodomain 21 80 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3461 Gso-Chr11 50510885 50511933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3461 17 205 Wox Gene Family AT5G59340 42.194 7.36e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gso11g3461 Homeodomain 1.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3461 - - gmx:100786177 434.876