Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3434 ATGCCGAAAATGGGACTCAAAAACTTGTTCTTCTTCAAAGCATCACCATCGCCACCTTCCTCTCCTCCCACAAGAACCTTCTCCGATTCACTAATGGACCAAAACATCGAAACCGCTCGCGCCATCATTTCCAAATGGGAACTTATTTCCCCTTCTGACCAAACCGCCCCTCTTTTCAGCAACACTCGCCAAGAAGCCAAACAGTACCTTAACGCTGTCATGAGCCTGCAGTCCACTATGCAGCACCTCGTCGCACTGGATTCCTCCTCCGACACCCTCGTCCAAGCCCACTTCCTTATGCAACTCGCCATGAAGAGACTCCAGGCCGAGTTCTATCGAATATTAGCCCAAAACAGAGACAATCTCCATCCTGAATCCGTCGCCTCCACCGATCACCGGAGCAGCAGCGTCTCCGATGACGGCTCCGATTTCTCCGACGATGAGTTCCGCTTCGCCGGCGACTCTGTCTCCACGGTCGCCATGGCGGACCTGAAAGCCATTGCGGAGTGTATGGTTTCCGCCGGATACAGCGAAGAGTGCGTCAAGATTTACATCTTAATGAGAAAATCAATCGTAGATGAGTCACTGTATCACTTCGGAGTGGAGAGGCTGAGCTCCTCTCAGATTCAGAAGATGGACTGGGAAGCGCTCGAGTCCAAGATTAAGTCCTGGCTCAACGCTGTCAAGATCGCCGTCGGCTCTTTGTTTCACGGTGAGAGAACGCTCTGCGACTACGTCTTCGGTTCACCGGAGAGGAAGACCGCGGAGTCCTGCTTCGCCGCGATTTGCAGCGAAGGGGCTACGTCGTTGTTCGGATTCCCGGAAAAAGTTGCCAAGTGCAGCAAGAAAACGCCGGAGAAAATGTTCAGGACGCTCGACTTGTACGAAGCGATCTCTGATAACCGTCAACAAATTGAATCCATCTTCTCGTCAGAATCAACCTTCTCAATCAGATCGCAGGTACTTGCTTCTCAGGCTAGGCTGGGCGAGGCCGTTGGGACGATGCTAAACAACTTCGAATCCGCGATTCAAAAGGAATCCTCCAAGATTCTCATGCCTGGCGGCGAGATCCACCCGCTCACGCGTTACGTCATGAACTACATCGCGTTCCTGGGCGATTACGGCGACGGGCTCGCGGAGATAGTCGGCGATTGGCGTAAAAATTCGTTGCCGGAGTGTTACTACCGAAGTCCCGATCGCGAGGGAAAGAAAGGGTCATCGGAGATAGCTGAACGGATGGCGTGGCTGATATTAGTGCTCCTCTGTAAGCTGGACAGAAAAGCTGAACTCTACAAAGAGGTTGCACTCTCTTATCTGTTCCTGGCGAATAACGTGCAATACGTCGTCGTAAAGGTCCGCAACACAAACCTAGGGTTGATCCTTGGGGAGGATTGGTTGACGAAGCACGAGTTGAAGGTGAAAGAGTATGTTTCCAAGTACGACCAAGCATCTTGA 1455 0.521 MPKMGLKNLFFFKASPSPPSSPPTRTFSDSLMDQNIETARAIISKWELISPSDQTAPLFSNTRQEAKQYLNAVMSLQSTMQHLVALDSSSDTLVQAHFLMQLAMKRLQAEFYRILAQNRDNLHPESVASTDHRSSSVSDDGSDFSDDEFRFAGDSVSTVAMADLKAIAECMVSAGYSEECVKIYILMRKSIVDESLYHFGVERLSSSQIQKMDWEALESKIKSWLNAVKIAVGSLFHGERTLCDYVFGSPERKTAESCFAAICSEGATSLFGFPEKVAKCSKKTPEKMFRTLDLYEAISDNRQQIESIFSSESTFSIRSQVLASQARLGEAVGTMLNNFESAIQKESSKILMPGGEIHPLTRYVMNYIAFLGDYGDGLAEIVGDWRKNSLPECYYRSPDREGKKGSSEIAERMAWLILVLLCKLDRKAELYKEVALSYLFLANNVQYVVVKVRNTNLGLILGEDWLTKHELKVKEYVSKYDQAS* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3434 484 Gene3D Exocyst complex component Exo70 40 484 - -
Gso11g3434 484 PANTHER EXOCYST COMPLEX PROTEIN EXO70 4 483 IPR004140 GO:0000145|GO:0006887
Gso11g3434 484 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 4 483 - -
Gso11g3434 484 SUPERFAMILY Cullin repeat-like 59 482 IPR016159 -
Gso11g3434 484 Pfam Exo70 exocyst complex subunit 222 483 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3434 Gso-Chr11 50308320 50310073 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3434 11 482 EXO70 exocyst subunit family AT5G59730 48.171 2.01e-149 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3434 K07195 - gmx:100777476 912.524