Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso11g3398 | ATGGATTTGGTAGCCAGTTGCAAGGAAAAATTGCAATATTTCCGTATAAAAGAGCTCAAAGATGTGCTCACTCATTTGGGACTCTCAAAACAGGGAAAGAAGCAGGATCTTGTTGATAGAATATTAGCTATCCTCTCAGAGGACCAAGTTTCCAAATTGTGGACCAAGAAGAATGCTGTTGGAAAACAAGAAGTGGCCAAATTAGTGGATGACACGTTTAGAAAGTTGCAGGTATCCGGGGCCATTGATCTTGCATCAAAGGGACAGGGTGCCTCAGATAGCAGTAATGTGAAAATTAAAGGTGAAATTGACGATTCCTATCAATCAGATACAAAGATTCGCTGTCTCTGTGGAAATGTATTGGATACAGAGCCATTGGTCAAGTGTGAAGATACAAGATGCCATGCGTCACAGCACATCAACTGTGTTATTATTCCAGAGAAACCTATGGATGGAATCCCACCCATTCCTGATAAATTCTACTGTGAAATATGTCGACTTGATCGGGCAGACCCGTTTTGTATTTCAGTGACACACCTTTTGTTTCCGGTGAAGTTGACCACAACCAATATTCCCACTGATGGATCAAACCCAGTACAGAGTGTGGAAAGAATGTTTCAACTCTCAAGAGCAAACAAGGAGTTGGTATCAAAATCAGAATATGATGTTCAGGTTTGGTGTATGCTTTTGAATGACAAGGTTTCATTCAGGATGCAATGGCCACAGTTTGCAGATCTAAAGGTCAATGGTCTTCCTGTTCGTGCAATTAACAGACCTGGTTCACAGTTGCTTGGGGCTAATGGTCGTGACACTGGTCCAGTTATCACGCCATATACAAAGGACGGAATTAATAAGATTTCCTTAACAGGGTGTGATGCTCGCATATTCTGTGTAGGGGTCCGTATTGTTAAAAGGCTCAGTATGCCAGAGGTCCTAAGCATGATTCCAGAGGAGTCTGATGGTGAGCATTTTGAAGATGCTCTTGCTCGTGTCTGTTGTTGTGTTGGGGGTGGAAATGCAAATGATAATGCTGATAGTGATAGTGATTTGGAAGTCGTTTCAGACACGTTTAGCATCAATCTCCGTTGCCCAATGAGTGGTTCAAGAATGAAGATTGCAGGAAGATTCAAACCTTGTGTTCACATGGGTTGTTTTGATCTTGAAGTTTTTGTGGAAATGAATGAACGGTCAAGGAAGTGGCAGTGCCCCATATGCCTTAAAAATTATGCTTTGGAGAATATCATTATTGACCCTTACTTCAATCGCATCACCACTCTGATGAAAAATTGTGGAGAAGAGATTGCAGAGGTTGAGGTGAAGCCTGATGGTTGTTGGCGGGTCAAGGCTAAGAATGAAAGTGAACGCCGGGAGTTGGGGACTCTTGCTCAATGGCACCGTCCAGATGGATCCCTCTTTGTTTCTACTGATGAAGTCAAGAGCATGGAAAATATAAAGCTCAAACAGGAAGGTGTTTCAGATAGTCCTATTGGTGTTTTAAAACTTGGCATCAGGAAGAATAGTAATGGTGTTTGGGAAGTCAGCAAACCTGAGAACACAAACACCTCTTCTGGTAATAATAGATTGAATGAGGATTTAGAAAATCATGAACATGTTATTATTCCAATGAGCAGCAGTGATACTGGAAGTGGCCGGGATGAAGATGATCCTAGCGTAAATCAGGGTGGTGGTGAGCATATTGATTATTCTACTACCAATGGGATTGAGATGGATTCTGTGTTTAACAATAATATTGATTCAGCTTATGGATATAATGTTAATAACGCTTCTGCTCTGATGGGTGATGCACAAGTTATTATTCTTAGTGATTCAGAAGAAGACAATGATGTATTGATGTCTCATACTCGTATAACTGGGTACAAAAATAATCAAACTAGTGATGCAGTTGATGCTTACTCAGTGCTACAGCCTGGAATTATTGATCCATATAGGGAAGATCACAATCCTGGAGTTTTTAATAATCCCAGTGAAGATGATTTTGGTATGCCCTCCCTCTGGCCATTGCAATCTGGAACTCCAGCAGTCCCGGGATTCCAATTATTCAGTTCTGAAGTGGAGGATGATGTGTCAGACGCATTGATTGATTTGCATCATGGCAATATTAATTGCTCCTCGTCACTGAATGGTTATACGTTGGCTCCAGATACTTTGGGATCTGGCACTCTCATACCAGATTCCTCAGCAGGTCGACCTGACGATGATTTAAATGGTGGGTTGGTTGACAATCCACTGGCATTTCCCAGAGAAGATCCATCCCTTCAGATTTTTCTCCCTACAAAACCAGCAGAATCATCTATGCAGCATGAACTGAGAGATCATGCAGATGGGTCAAATGGTGTCTTCACTGAGGATTGGATCTCTCTTAGTCTTGGAGGTGGTGCCAGTGGCAGTAATGGTGACACTTCCTCTGCAAATGGATTGAATTTGAGACCACAAATTACACCCAGAGAAGATGCCAGAGATTCTTTGACAGATGCTGCTCCTTTGCTTCTTGGTGTGAATGATGTTAGACCTGACAAGGCAAGTAGGCAAAGATCAGATAGCCCTTTCTCATTTCCCCGCCAAAAGCGTTCAGAAATGGAAGATGATGTGATCTGA | 2616 | 0.4205 | MDLVASCKEKLQYFRIKELKDVLTHLGLSKQGKKQDLVDRILAILSEDQVSKLWTKKNAVGKQEVAKLVDDTFRKLQVSGAIDLASKGQGASDSSNVKIKGEIDDSYQSDTKIRCLCGNVLDTEPLVKCEDTRCHASQHINCVIIPEKPMDGIPPIPDKFYCEICRLDRADPFCISVTHLLFPVKLTTTNIPTDGSNPVQSVERMFQLSRANKELVSKSEYDVQVWCMLLNDKVSFRMQWPQFADLKVNGLPVRAINRPGSQLLGANGRDTGPVITPYTKDGINKISLTGCDARIFCVGVRIVKRLSMPEVLSMIPEESDGEHFEDALARVCCCVGGGNANDNADSDSDLEVVSDTFSINLRCPMSGSRMKIAGRFKPCVHMGCFDLEVFVEMNERSRKWQCPICLKNYALENIIIDPYFNRITTLMKNCGEEIAEVEVKPDGCWRVKAKNESERRELGTLAQWHRPDGSLFVSTDEVKSMENIKLKQEGVSDSPIGVLKLGIRKNSNGVWEVSKPENTNTSSGNNRLNEDLENHEHVIIPMSSSDTGSGRDEDDPSVNQGGGEHIDYSTTNGIEMDSVFNNNIDSAYGYNVNNASALMGDAQVIILSDSEEDNDVLMSHTRITGYKNNQTSDAVDAYSVLQPGIIDPYREDHNPGVFNNPSEDDFGMPSLWPLQSGTPAVPGFQLFSSEVEDDVSDALIDLHHGNINCSSSLNGYTLAPDTLGSGTLIPDSSAGRPDDDLNGGLVDNPLAFPREDPSLQIFLPTKPAESSMQHELRDHADGSNGVFTEDWISLSLGGGASGSNGDTSSANGLNLRPQITPREDARDSLTDAAPLLLGVNDVRPDKASRQRSDSPFSFPRQKRSEMEDDVI* | 872 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso11g3398 | 871 | CDD | PHD_Bye1p_SIZ1_like | 114 | 165 | - | - | |
Gso11g3398 | 871 | MobiDBLite | consensus disorder prediction | 541 | 566 | - | - | |
Gso11g3398 | 871 | SMART | sap_9 | 11 | 45 | IPR003034 | - | |
Gso11g3398 | 871 | SMART | PHD_3 | 114 | 166 | IPR001965 | - | |
Gso11g3398 | 871 | SUPERFAMILY | FYVE/PHD zinc finger | 107 | 169 | IPR011011 | - | |
Gso11g3398 | 871 | SUPERFAMILY | SAP domain | 1 | 64 | IPR036361 | - | |
Gso11g3398 | 871 | Pfam | SAP domain | 13 | 42 | IPR003034 | - | |
Gso11g3398 | 871 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 338 | 447 | IPR013083 | - | |
Gso11g3398 | 871 | MobiDBLite | consensus disorder prediction | 829 | 871 | - | - | |
Gso11g3398 | 871 | MobiDBLite | consensus disorder prediction | 844 | 871 | - | - | |
Gso11g3398 | 871 | ProSiteProfiles | Zinc finger SP-RING-type profile. | 346 | 429 | IPR004181 | GO:0008270 | |
Gso11g3398 | 871 | PANTHER | ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN | 9 | 809 | - | - | |
Gso11g3398 | 871 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 103 | 171 | IPR013083 | - | |
Gso11g3398 | 871 | ProSitePatterns | Zinc finger PHD-type signature. | 115 | 165 | IPR019786 | - | |
Gso11g3398 | 871 | PANTHER | E3 SUMO-PROTEIN LIGASE SIZ1 | 9 | 809 | - | - | |
Gso11g3398 | 871 | Pfam | MIZ/SP-RING zinc finger | 359 | 407 | IPR004181 | GO:0008270 | |
Gso11g3398 | 871 | Gene3D | SAP domain | 1 | 60 | IPR036361 | - | |
Gso11g3398 | 871 | ProSiteProfiles | SAP motif profile. | 11 | 45 | IPR003034 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso11g3398 | Gso-Chr11 | 49871867 | 49881006 | Dispersed/Wgd |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso11g3398 | - | K22403 | gmx:100803144 | 1705.26 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso12g1434 | 12 | 37034462 | 37046866 | Gso11g3398 | 11 | 49871867 | 49881006 | GST | |
Gso11g3398 | 11 | 49871867 | 49881006 | Gso12g0584 | 12 | 5263600 | 5272590 | PCT | |
Gso11g3398 | 11 | 49871867 | 49881006 | Gso11g1259 | 11 | 11622891 | 11633569 | PCT | |
Gso12g0584 | 12 | 5263600 | 5272590 | Gso11g3398 | 11 | 49871867 | 49881006 | PCT | |
Gso11g1259 | 11 | 11622891 | 11633569 | Gso11g3398 | 11 | 49871867 | 49881006 | PCT |