Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3394 ATGTCCGTCATCGACATTCTCTTCCGCGTGGACGACATATGCCACAAATATGAGAAATACGACATCGATAAGCAGCGCGAGCTCAATGCCTATGGCGATGATCTCTTCGCTCGCCTCTACGCCGCTGTTGATTCCAGCATTCAATCTGCTCTCAATAAATCGGAGGTTGCCTCCACGGAGAAGAACAGGGCTTCTGCTGCGGCTTTGAATGCAGAGGTTCGTCGAACCAAAGGTAGACTCATGGACGAGCTTCCTAAACTCCGCAAATTGATGCACAAGAAGGTTAAAGGTCTCACAAAAGAGGACATGGCCGTTCGACAGGATCTTGTTCTGGCATTGCCAGAGAGAATCCAAGCAATACCAGATGGTATTTCTGGTGCTGCTGTTCAAACTGCAGGATGGACCGCTACCTCATCTCAGCCGCATATCAAGTTTGATTCATCAGAGGGACATCTTAGCAGTGATTATTTCCAGCAAAGTGAAGAATCCAGTCAGTTTCGACAAGAGTATGAGATGCGCAGGACGAAACAGGATGAAGGACTTGATATCATATCAGAGGGATTGGATACCTTGAAGGATCTGGCACATGAAATGAATGAGGAAATTGATCGGCAAGTTCCCTTAATGGATGAAATTGACACAAAGGTGGATAGAGCAGCAGCTGATGTCAGAAACACAAACGTAAGGCTGAAGAAAACTCTCACCGAGATAAGGTCTAGTCGAAATTTCTGCATCGACATTGTTCTGCTCTGTGTTCTTCTTGGAATCTTTTTGTATTTATACAATGCTATGAGGTGA 798 0.4549 MSVIDILFRVDDICHKYEKYDIDKQRELNAYGDDLFARLYAAVDSSIQSALNKSEVASTEKNRASAAALNAEVRRTKGRLMDELPKLRKLMHKKVKGLTKEDMAVRQDLVLALPERIQAIPDGISGAAVQTAGWTATSSQPHIKFDSSEGHLSSDYFQQSEESSQFRQEYEMRRTKQDEGLDIISEGLDTLKDLAHEMNEEIDRQVPLMDEIDTKVDRAAADVRNTNVRLKKTLTEIRSSRNFCIDIVLLCVLLGIFLYLYNAMR* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3394 265 PANTHER SYNTAXIN-72 1 262 - -
Gso11g3394 265 Gene3D - 171 232 - -
Gso11g3394 265 ProSitePatterns Syntaxin / epimorphin family signature. 177 216 IPR006012 GO:0005484|GO:0006886|GO:0016020
Gso11g3394 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
Gso11g3394 265 SMART tSNARE_6 166 233 IPR000727 -
Gso11g3394 265 CDD SNARE_Qc 176 232 - -
Gso11g3394 265 Pfam SNARE domain 208 258 IPR000727 -
Gso11g3394 265 PANTHER SYNTAXIN 1 262 IPR045242 -
Gso11g3394 265 SUPERFAMILY SNARE fusion complex 164 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3394 Gso-Chr11 49817335 49820445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3394 1 265 SNARE and Associated Proteins AT3G09740 65.543 3.20e-133 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3394 K08506 - gmx:100817729 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1440 12 37145777 37149656 Gso11g3394 11 49817335 49820445 GST