Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3382 ATGTTTACAATGCGATTGCTATGGGGGCTAAGGCTGCCCCTACTCATACTGATTCAACTTCTATACTCCAACAAATCAACCTACAAATTATACGCTGAGGCTTTGTTCACTTTCAAGGGTTCTCTTGGAGGTCCACAGCAATTAGGATGCAGCATTGTGAAATATCCATGTCAAATGCAATGGCCTTGTCTTGACTGCTATAAACTAAAAGATCCAGGTGGAATAACAGCAAAGATAGATGGGAATAACGACGTTCCAACACTTACACCTCTTCAAGAAACTCAAGTTAGAAAACCAGGAGGAACAAGGGCTGCTGCCATAGTCGGTATTGTTGTTGCTGCCTTAGTCGTCATTGTCATTTTGGTGACTGTCTATATCTGCTTGATGCGTGTTAAAAGATTTATGAGGCAAACATCTGAGGTTGCTTCTTCTATGCCATCTCCCACTGTTGAGATAGGAAGAGTCAACAACGCACATGTTAATGCTTTCTCTCCACATTATACGCATAACACAAGACAGTTAACAATTCTGGAACTAGAACAAGCAACACGAAATTTCAGTCATAGTAATATTATTGGTGAAGGTGGATTTGGTTTTGTATACAAGGGCTTACTTCAAGATGGATCCATAGTGGCTATAAAAAGGCGTCTATTTGTTCTGACACAGGATTTTGTCCTTAAGGTGAAACAGATAGCTCATATTCACCACAATCATCTTGTGAAGCTCATAGGCTATTACGAAGATAGCTATCAACAATTACTTGTATATGAATATCTCCCTAACGGCAATGTAGGGAGTCACCTATATGACAGTGAAGGTTTACCTATTGGAAGGTTGGATTTGTGGCGAAGGATATCTATTGCTTCAGGCGCGTCCAAAGGTGTGGAACATCTTCATAGTTTGGTCCCTCCTTTGATTCACACAAATTTTAGAACTAGCAATGTTCTGTTAGATGAAAATTACACGGCCAAGGTTTCTGATTATGGATTCTGCAATTCGAAAACACAAGTTGATAATGTTGGCTCATCTTCAAATGTAGACTGTTTTCTAGACCCAGAGCTGAGCTTTCCACAAAACTATACGGAGAAGAGTGATGTATACAGTTTCGGGGTCTTCTTACTAGAGTTGATTTGTGGTTGTGAAGCACAAAACAAAAGCATGTCAAACCCAGATGAAAATATAGTGTTTCAGGCAAAAAATAGCGTTGACTTGGACAAGTTTGTTGACATAACGCTGGGGGAGCAAGAAAAGCATGGTGCTAGAAGAGTGATGAAATTGGCATTGCTCTGTGTGGATGTGACTAGTAGAAGGCCATCAATGGCTCAAATTGTGCATGAGCTGGAGCAGATTCAAAGAGAAATTGCTCCAATGTATTCTCAATTCAACGAGGAGATTGGTGCCGTGACTCTAGGGAGTGAGCTCTTTCAGTAA 1431 0.4053 MFTMRLLWGLRLPLLILIQLLYSNKSTYKLYAEALFTFKGSLGGPQQLGCSIVKYPCQMQWPCLDCYKLKDPGGITAKIDGNNDVPTLTPLQETQVRKPGGTRAAAIVGIVVAALVVIVILVTVYICLMRVKRFMRQTSEVASSMPSPTVEIGRVNNAHVNAFSPHYTHNTRQLTILELEQATRNFSHSNIIGEGGFGFVYKGLLQDGSIVAIKRRLFVLTQDFVLKVKQIAHIHHNHLVKLIGYYEDSYQQLLVYEYLPNGNVGSHLYDSEGLPIGRLDLWRRISIASGASKGVEHLHSLVPPLIHTNFRTSNVLLDENYTAKVSDYGFCNSKTQVDNVGSSSNVDCFLDPELSFPQNYTEKSDVYSFGVFLLELICGCEAQNKSMSNPDENIVFQAKNSVDLDKFVDITLGEQEKHGARRVMKLALLCVDVTSRRPSMAQIVHELEQIQREIAPMYSQFNEEIGAVTLGSELFQ* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3382 476 Gene3D Phosphorylase Kinase; domain 1 150 258 - -
Gso11g3382 476 PANTHER PROTEIN KINASE APK1A, CHLOROPLASTIC-LIKE 75 474 - -
Gso11g3382 476 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 75 474 - -
Gso11g3382 476 ProSiteProfiles Protein kinase domain profile. 186 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3382 476 Gene3D Transferase(Phosphotransferase) domain 1 259 468 - -
Gso11g3382 476 SUPERFAMILY Protein kinase-like (PK-like) 166 456 IPR011009 -
Gso11g3382 476 ProSitePatterns Protein kinases ATP-binding region signature. 192 214 IPR017441 GO:0005524
Gso11g3382 476 Pfam Protein tyrosine and serine/threonine kinase 189 447 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3382 Gso-Chr11 49708995 49714142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3382 94 452 Receptor kinase-like Gene Family AT4G02010 35.544 3.15e-55 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Gso11g3382 PK_Tyr_Ser-Thr 5.7e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3382 - - gmx:100815066 905.975