Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3361 ATGTGCAAGACAAAGATGGCAACCAACGCGGCCAGTCCCACTCGCACTCCACGCTCCCAACAACGCCCCACCCAAAGCCCAAGGACACCCTCGTCAAGGCCCACGCTCAGGCCCACCTCTTTCTCCGACAATCCCTCCACCTCCTACAGCGGCTCCACCGGTTACCGCCTCTCCTCTGACACCTCCATCTCAAGCTTCTCCTCCATCACCTCCCTCCGCGACACGCTCCCCGAAAACCCCCACATCTACGACTTCTCCGAAATCTGTGCCGCCACCAACAACTTCCTCTCCAAACGCCACTCCTCCTCCACCCCTTGCTGGCGCTGCACCCTCCGTGGCGCCGACGTCATTGTCTTCCAGCGCAAGTTTCGCGGCAAACTCCAAACCAACCAGCTCCAGCAACTCCTCTCCGTCGTCTGCCGCAGCCACCACGTCAGCATCATCAAACTCCTTGGTGCCTCCGTCTCCGGTGACCACATCTACCTTGTCTACGACTTCGTCAGCAACGGCGCCACCCTCTCCGACTGCCTCCGCAACAAAAACAACGCGCACTTCACCGTTCTCTCCACGTGGATGTCGCGAATACAGGTCGCCACGGATCTCGCTCACGGCCTCGATTACATTCACAACAAAACCGGTTTGAACATCAATTTCGTCCATAACCATATCAAGAGCAGCGGAATCATCGTCACCGAGCCTTCCTTCAATGCTAGGGTTTGCCACTTCGGCGCCGCGCAGCTCTGCGGCGAAGTCGAACTCCAGAACCAGAAATTAGGCGAAATTAGTGAAATCGAGGAAAAAATAACATCATCGCCGGCGAGATCCAAGAAGTTCGAGGGCGTGCGGGGGTACATTGCGCCAGAATTTCCAGCCTCCGGCGTTGCGACTCAGAAGTCTGATATATACGCTTTCGGAGTGGTGATGTTGGAGCTTTTGTCCGGGGAAGAGCCGTTGAAGTTCAAGTGTGACGAGAAAACGCGCGAATTTGTGAGGATGTCGGTGATTGATGCGGCGAGGGCCGCCGTGGACGGCGACGAGGGTAGCGTGGAGGGGAAGCTGAGGAGGTGGGTGGATCGGAGACTGAAAGATTCTTTTCCAGTCGACGTTGCTGAGAAGTTGACACGTGTCGCGCTGGAGTGCGTACACGTGGATCCAGATAAGAGACCGAACATGGGACGCGTGGCTGGAAAGATCTCAAAGTTTTATTTGACGTCGAGGATCTGGTCAGATAGTATTAAGATGCCTGATATTACTGTTACGTTGGGACCTCGATGA 1275 0.5584 MCKTKMATNAASPTRTPRSQQRPTQSPRTPSSRPTLRPTSFSDNPSTSYSGSTGYRLSSDTSISSFSSITSLRDTLPENPHIYDFSEICAATNNFLSKRHSSSTPCWRCTLRGADVIVFQRKFRGKLQTNQLQQLLSVVCRSHHVSIIKLLGASVSGDHIYLVYDFVSNGATLSDCLRNKNNAHFTVLSTWMSRIQVATDLAHGLDYIHNKTGLNINFVHNHIKSSGIIVTEPSFNARVCHFGAAQLCGEVELQNQKLGEISEIEEKITSSPARSKKFEGVRGYIAPEFPASGVATQKSDIYAFGVVMLELLSGEEPLKFKCDEKTREFVRMSVIDAARAAVDGDEGSVEGKLRRWVDRRLKDSFPVDVAEKLTRVALECVHVDPDKRPNMGRVAGKISKFYLTSRIWSDSIKMPDITVTLGPR* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3361 424 ProSiteProfiles Protein kinase domain profile. 55 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3361 424 SUPERFAMILY Protein kinase-like (PK-like) 78 394 IPR011009 -
Gso11g3361 424 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 424 - -
Gso11g3361 424 Pfam Protein kinase domain 127 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3361 424 PANTHER OS09G0572100 PROTEIN 1 424 - -
Gso11g3361 424 MobiDBLite consensus disorder prediction 1 55 - -
Gso11g3361 424 Gene3D Phosphorylase Kinase; domain 1 59 166 - -
Gso11g3361 424 Gene3D Transferase(Phosphotransferase) domain 1 169 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3361 Gso-Chr11 49466871 49468467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3361 78 412 Receptor kinase-like Gene Family AT1G51940 32.153 1.18e-42 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gso11g3361 Pkinase 3.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3361 - - gmx:100809183 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0431 15 3952397 3955293 Gso11g3361 11 49466871 49468467 GST