Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3356 ATGGCCAACTTCAGTGTCAGAAACAGCAGCAGCAGCAGCAGCAAAAAGAAGAGCGTAGTAGGAGGCATTGTGAAGTTCAAATTCGTCGTTGAGAAGCTCCAAAAGAGACTCCTAATGGGGAGAAACAAAGAAGGGTGTGATTCTTCTTTAAACTCAAGCTATGTGCCAGAGGACGTGAAGGAAGGACACTTCGCAGTGATTGCGGAGGGTGGAGAGGAACAAAAGAGGTTCGTGCTGCCACTAAGCTGTTTAACCAACCCAACGTTTTTGAAGCTATTGGAGCAAGCTGAAGAAGAGTATGGCTTTGATCATGGAGGTGCAGTAACCATTCCTTGCAGGCCTTGTGAACTTGAGAGTATACTTGCTCACCAATGGCATACCCAAACTACTACTACTGGACCAAGGTGGACTTGTAGAAAATCCATGGTATTTTGA 435 0.4575 MANFSVRNSSSSSSKKKSVVGGIVKFKFVVEKLQKRLLMGRNKEGCDSSLNSSYVPEDVKEGHFAVIAEGGEEQKRFVLPLSCLTNPTFLKLLEQAEEEYGFDHGGAVTIPCRPCELESILAHQWHTQTTTTGPRWTCRKSMVF* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3356 144 Pfam Auxin responsive protein 42 122 IPR003676 GO:0009733
Gso11g3356 144 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 29 130 - -
Gso11g3356 144 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 130 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3356 Gso-Chr11 49383650 49384315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3356 14 112 Calmodulin-binding Proteins AT5G20810 38.384 1.68e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3356 - K14488 gmx:102668167 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1487 12 38051960 38052771 Gso11g3356 11 49383650 49384315 GST
Gso11g3356 11 49383650 49384315 Gso12g0646 12 6205576 6206360 PCT
Gso11g3356 11 49383650 49384315 Gso11g1474 11 17112517 17113364 PCT
Gso12g0646 12 6205576 6206360 Gso11g3356 11 49383650 49384315 PCT
Gso11g1474 11 17112517 17113364 Gso11g3356 11 49383650 49384315 PCT