Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3332 ATGGCGTTATTTTGGCCGCACGTGCTGCAGTTCCGTTCTCAACCTTCGCTCGGACATGCTAACTGCGTGTTCTTCTCCGATCTCACTGAATCCCGCTCTGTAGAACTTTCATGCACTGATTCCTTCACTCTGGTTCGCCGGTGCAAGATCTCCGGTCCGGCTCCGGCGGCGCTGAAACCGGTGAAATGCCTCGGCAGATCTACGGGGGAGAAGCAATGGAGTGACGCCGAAACCGCCGTATCCGACACCGACGAAGTTGCTGATGAACCGAATGACCGGAACCAAACTTCTGTTCCGACAAATGGTCGCGTTGAGTCGCAGAGGATTGCCACCACGTCTTCCGGCGACTCTCTCTCTCTCGGAATTCGAGAACCGGTTTATGAAGTTGTTGAAGTGAGGTCCAATGGGAAAGTATCAACTAGAAAAATCAACAGGAGACAATTGTTGAAGTCAAGTGGTCTTCGTCCACGGGACATTCGAAGTGTGGATCCTTCATTGTTTATGACAAATTCAATGCCTGCTTTGCTGGTCCGGGAGTATGCTATACTTCTAAATCTGGGTTCACTACGAGCAATAGCAATGCAAGATTGTGTACTTATATTTGACAATAATCGTATAGGAGGGAAAGCTTTTCTGGAGACATTGCTACCTCGATTGAACCCCAAGAACAACAATGGAGGGCCATCAATGCCATTTGAACTTGAGGTTGTTGAAGCAGCATTGCTTTCAAGAATACAGCGATTGGAGCAGAGATTGATGGACTTAGAACCTCGTGTACAAGCTCTTCTTGAGGCATTGCCAAATCGGTTAACTGGTGACATATTGGAGCAGCTTCGTATTAGCAAACAAACTTTGGTTGAGTTAGGTTCTAAGGCAGGAGCTCTCAGACAGATGCTGCTTGACCTTCTGGAGGATCCCCATGAAATACGCCGTATATGTATCATGGGAAGAAACTGCACACTTAGTAAAGGAAACAATGATATGGAATGTTCAGTGCCTTTTGAAAAGCAGAATGCTGAGGAGGAGGAGGAGGAAATCGAAATGCTTCTGGAAAATTATCTTCAAAGATGTGAATCTTGTCATGGTCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATAGCTGTCAGTTTGAGTTCACGTAGGCTTGAGGTTAGCAGAGTAGAACTGCTTTTGCAGGTTGGAACATTCTGTGTGGCAATAGGCGCCCTTGTAGCAGGTATATTTGGCATGAACCTGAAGTCCTATCTTGAGGAACATGTGTTGGCATTTTGGCTGACAACAGCAGGGATAATTATTGGTGGCATTATTGCTTTCTTTCTAATGTATTCCTACCTCAGGGCTAGGAAAATATTTTAA 1371 0.4581 MALFWPHVLQFRSQPSLGHANCVFFSDLTESRSVELSCTDSFTLVRRCKISGPAPAALKPVKCLGRSTGEKQWSDAETAVSDTDEVADEPNDRNQTSVPTNGRVESQRIATTSSGDSLSLGIREPVYEVVEVRSNGKVSTRKINRRQLLKSSGLRPRDIRSVDPSLFMTNSMPALLVREYAILLNLGSLRAIAMQDCVLIFDNNRIGGKAFLETLLPRLNPKNNNGGPSMPFELEVVEAALLSRIQRLEQRLMDLEPRVQALLEALPNRLTGDILEQLRISKQTLVELGSKAGALRQMLLDLLEDPHEIRRICIMGRNCTLSKGNNDMECSVPFEKQNAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVSLSSRRLEVSRVELLLQVGTFCVAIGALVAGIFGMNLKSYLEEHVLAFWLTTAGIIIGGIIAFFLMYSYLRARKIF* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3332 456 CDD Mrs2_Mfm1p-like 129 455 IPR039204 -
Gso11g3332 456 Gene3D - 122 203 - -
Gso11g3332 456 Coils Coil 245 265 - -
Gso11g3332 456 Coils Coil 332 356 - -
Gso11g3332 456 MobiDBLite consensus disorder prediction 69 101 - -
Gso11g3332 456 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 70 455 - -
Gso11g3332 456 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 70 455 IPR039204 -
Gso11g3332 456 Gene3D Magnesium transport protein CorA, transmembrane region 205 387 - -
Gso11g3332 456 Pfam CorA-like Mg2+ transporter protein 336 445 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3332 Gso-Chr11 49104309 49110154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3332 120 456 MRS2 Gene Family AT5G22830 83.976 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3332 K16075 - gmx:100808371 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1511 12 38494307 38500786 Gso11g3332 11 49104309 49110154 GST