Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3309 ATGAGTGAGACTGGGAACCCCGTTTTGTTTCACTTTCCTCATCCCCAACCCCAACCCCTTATAACACTCAAAAACACGCACGCAGACTTAGACTCACTCCTTTCCATTTCCAACGCAATGGACCCATGGCTCGACGATCTTACCGACGACCTTCAGAGTCTTAGCTTCGCCTCCACCGCCACCGCGGACATCAAGCGGAGCACCAGCTTCGGCTCCGAAACCACCACCCTAACGGCCTCCTCCTCCGCCCACCTCCCCGCCAACAGCAAGCCCCACGCGCCCTCCTCCGACCCCCGCTGGGCCGCCATCCACCGGATCCGATCGGACTCCCCCAGCCGCCGCATCCTCCCCTCCGACCTCCTCTTCTCCCGCCGCCTTGGCTCCGGCGACATCAGCTCCGTCTACCTCGCCGAACTCAACGACGGCTCCCTCTCCGTCATGTTCGCCGCCAAGGTCATGGACAAGAAGGAGCTCGCCAGCCGCAGCAAGGAGGGAAGAGCCAAGACCGAGCGAGAAATTCTCGAATCGCTCGACCACCCCTTCCTCCCCACCCTCTACGCCACCATCGACGCCGCCAAATGGCTCTGCCTCCTCACCGAGTTCTGCCCCGGCGGCGACCTCCACGTCCTACGCCAACGACAGCCCCACAAACGCTTCCCGGAACCCGCCGTCAGGTTCTACGCGTCAGAGGTGCTAGTGGCACTTGAATACCTTCACATGATGGGGATAGTGTACCGTGATCTGAAGCCGGAGAACGTGTTAGTTCGATCAGACGGGCACATCATGCTCACTGATTTTGACCTCTCGTTAAAATGTGATGATTCCACATCAACGCCACAGATCATCTTGGATCAGAAAAACACCCCTCGCACGGGCCCACGCGTGGAACCCTCTCAGACTCAGTTCAGCTCGTCTTCGTGCATACTACCCAACTGTATAGTCCCCGCAGTGTCGTGTTTCCACCCAAAACGCAAGCGAAAGAAGAAGCAGAGCCAACACAATGGGCCTGAGTTTGTAGCCGAGCCCATTGATGTCCGCTCCATGTCGTTCGTTGGGACCCACGAGTACTTGGCTCCGGAAATCGTGTCTGGGGAGGGTCACGGTAGTGCCGTGGACTGGTGGACTTTGGGCATATTTATATTTGAATTGTTCTATGGTATCACACCCTTTAGGGGAATGGACAATGAGCTAACCCTAGCAAACATTGTGGCTCGAGCCTTGGAGTTCCCCAAGGAACCCACCGTGCCAGCCACGGCAAAGGACCTCATCTCACAGTTATTGGTTAAGGACCCTTCGAGGAGGCTAGGGTCAACCATGGGTGCTTCCGTCATCAAGCACCACCCCTTTTTCCAAGGTGTTAATTGGGCATTGCTAAGGTGTACACCTCCACCCTATGTGCCCCCACCTTATATTAAAGAAGCTGTATCATCTGATCATGAAATTGAAACCTGTCCGCAGACTCCAATTGATTACTATTGA 1479 0.5612 MSETGNPVLFHFPHPQPQPLITLKNTHADLDSLLSISNAMDPWLDDLTDDLQSLSFASTATADIKRSTSFGSETTTLTASSSAHLPANSKPHAPSSDPRWAAIHRIRSDSPSRRILPSDLLFSRRLGSGDISSVYLAELNDGSLSVMFAAKVMDKKELASRSKEGRAKTEREILESLDHPFLPTLYATIDAAKWLCLLTEFCPGGDLHVLRQRQPHKRFPEPAVRFYASEVLVALEYLHMMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSTSTPQIILDQKNTPRTGPRVEPSQTQFSSSSCILPNCIVPAVSCFHPKRKRKKKQSQHNGPEFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELFYGITPFRGMDNELTLANIVARALEFPKEPTVPATAKDLISQLLVKDPSRRLGSTMGASVIKHHPFFQGVNWALLRCTPPPYVPPPYIKEAVSSDHEIETCPQTPIDYY* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3309 492 ProSiteProfiles Protein kinase domain profile. 120 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3309 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Gso11g3309 492 SMART serkin_6 120 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3309 492 Gene3D Transferase(Phosphotransferase) domain 1 346 468 - -
Gso11g3309 492 PANTHER OS11G0150700 PROTEIN 40 492 - -
Gso11g3309 492 PANTHER FLIPPASE KINASE 1-RELATED 40 492 - -
Gso11g3309 492 MobiDBLite consensus disorder prediction 71 98 - -
Gso11g3309 492 Gene3D Phosphorylase Kinase; domain 1 122 205 - -
Gso11g3309 492 SUPERFAMILY Protein kinase-like (PK-like) 94 477 IPR011009 -
Gso11g3309 492 Pfam Protein kinase domain 124 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3309 492 Pfam Protein kinase domain 347 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3309 492 CDD STKc_phototropin_like 124 461 - -
Gso11g3309 492 MobiDBLite consensus disorder prediction 71 89 - -
Gso11g3309 492 Gene3D Transferase(Phosphotransferase) domain 1 206 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3309 Gso-Chr11 48879551 48883796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3309 40 492 AGC Kinase Gene Family AT3G44610 67.653 0.0 594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gso11g3309 Pkinase 2.9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3309 K08286 - gmx:100792738 960.674