Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3307 ATGAAGGTCGTCGCTGCATACTTGCTCGCAGTGTTGGGAGGGAATCCATCTCCTTCTGCCGATGATATCAAAAACATCCTCGGCGCAGTTGGAGCTGAGGCTGAGCATGAGTTGATTGAGTTGCTCTTGACCGAAGTCAAGGGCAAAGACTTCAATGAGCTACTTGCTAGTGGAAGTGAAAAGATTTCTGCAGTGGCTGGTGGTGGTGCAGCGGTTGCTGTTGCTGCTGCACCAGCAGGAGGTGCTGGTGGCGGTGCTGCACCTGCTGCCGAAGTAAAGGAAGAAAAGAAAGTAGAAGAGAAGGAGGAATCTGATGATGATATGGGTTTCAGTTTGTTCGACTAA 345 0.5014 MKVVAAYLLAVLGGNPSPSADDIKNILGAVGAEAEHELIELLLTEVKGKDFNELLASGSEKISAVAGGGAAVAVAAAPAGGAGGGAAPAAEVKEEKKVEEKEESDDDMGFSLFD* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3307 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Gso11g3307 114 Gene3D - 1 59 IPR038716 -
Gso11g3307 114 Pfam 60s Acidic ribosomal protein 17 113 - -
Gso11g3307 114 Hamap 50S ribosomal protein L12 [rpl12]. 2 114 IPR027534 GO:0003735|GO:0005840|GO:0006414
Gso11g3307 114 MobiDBLite consensus disorder prediction 79 114 - -
Gso11g3307 114 MobiDBLite consensus disorder prediction 90 104 - -
Gso11g3307 114 CDD Ribosomal_P2 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Gso11g3307 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2-1 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3307 Gso-Chr11 48867927 48869453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3307 1 114 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 63.158 9.90e-28 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3307 K02943 - gmx:100791682 140.198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1538 12 38824177 38825700 Gso11g3307 11 48867927 48869453 GST