Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3271 ATGTCTTCCAACAAGAGGAGGTTCATGAGAGCCCTATTCAAAGCAAATGGAGGCTGTGGGTGTAGCAAACCGAAATCCTCTGACGTACACGAACCCACCCCAAAACCCAAAATCTCCATTTACCAAAACACAAAACCTAGCAGCCTCAATTCATCCACCACTTCCGGTGACCGCAACGAGGACGACGAAGTCTTCACTTCCACCACCATCTCCGAATCCGACACAAATCATCAAAACCCCAACAACAACAACATGCCAAAACCTAGCCCAAAACTCGTTGACAGCATCGCCGTCGAGAAGGACTCAAACGACCCACATAAGGATTTTCGAGCCTCCATACTCCAAATGATCCTGGAGAGAGAGATCTACACAGAAACCGAACTCCAAGAGCTTCTCGAGTGCTTCCTCCAGTTGAACGCCACGTGTCACCACCAAGTCATCGTTCAAGCCTTCATGGAGATCTGCGAAGAAGTGTTCCCGAAGAAGAACATCGTCAGTGGTGGTGGCGCTCCTGAACAACGTCGCAGGAACCAGATCACGCGAAAGAGTCGGTGA 555 0.4991 MSSNKRRFMRALFKANGGCGCSKPKSSDVHEPTPKPKISIYQNTKPSSLNSSTTSGDRNEDDEVFTSTTISESDTNHQNPNNNNMPKPSPKLVDSIAVEKDSNDPHKDFRASILQMILEREIYTETELQELLECFLQLNATCHHQVIVQAFMEICEEVFPKKNIVSGGGAPEQRRRNQITRKSR* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3271 184 MobiDBLite consensus disorder prediction 37 55 - -
Gso11g3271 184 ProSiteProfiles OVATE domain profile. 98 157 IPR006458 -
Gso11g3271 184 MobiDBLite consensus disorder prediction 165 184 - -
Gso11g3271 184 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 96 156 IPR006458 -
Gso11g3271 184 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 176 - -
Gso11g3271 184 MobiDBLite consensus disorder prediction 13 91 - -
Gso11g3271 184 MobiDBLite consensus disorder prediction 66 89 - -
Gso11g3271 184 Pfam Transcriptional repressor, ovate 102 159 IPR006458 -
Gso11g3271 184 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 176 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3271 Gso-Chr11 48545676 48547039 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso11g3271 Ovate 6.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3271 - - gmx:102670259 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g3271 11 48545676 48547039 Gso12g0760 12 7658594 7659601 PCT
Gso11g3271 11 48545676 48547039 Gso11g1352 11 15239775 15241093 PCT
Gso12g0760 12 7658594 7659601 Gso11g3271 11 48545676 48547039 PCT
Gso11g1352 11 15239775 15241093 Gso11g3271 11 48545676 48547039 PCT