Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3264 ATGCTCTTGTTCTTCCATTGGGTCGTAGAAAAGGAAAAAAAAGTGAGAAAATTCTCGCGTGGTTTTGAGATGGGGTTTCTGTTGAAAGAAGCTTTGAGGACTCTCTGCGGTCGGAATCAGTGGTCTTATGCTGTGTTCTGGAAGATCGGTTGCCACAATTCCAAGCTATTAATCTGGGAAGAATGCTATTATGAACCTTTGCCGTGGCCTCCACACATGTTTGGGATGCCTGATTTGCCTTACCAGAATGGGGAAGGATGCTGGTTTTCTTCAGAGTCTCTGTCATCTCAGCTTGGGATTCAAGAGGAGGTCCGAGTCTCTTCTTTGATTAAAAAAATGACTGTAAACAATTCAGTTATTATTGCAGGTGAAGGCATAATTGGACGGGCTGCATTTACAGGCAGCCATCAGTGGATTCTTTTGAACAATTTCACTGAAGATGCATATCCTCCACAGGTATATGCTGAAGTGCATCACCAATTTTCAGCTGGAATACAGACAGTAGCTGTTATTCCTGTGCTTCCTCATGGGGTTGTTCAACTTGGTTCTTTCTTGCCTATAATTGAGAATATGGGATTTGTGAATGATGTGAAGAGCTTGATCTTTCAATTGGGATGTGTTCCTGGCGCCCTTCTATCTGAAGACTATTCACCTCCCATTGCTGGTGTGCCTGTGTCTGTTGATCCACCAGTCATTGCCTCAAACTGCCCTCCATCCGTAACTAGTGGCTCCAATCAGCAAAATAATTCATCGCATGCTTCAATGTCCTTTAGTGTTCAAACACCATGTCCTCTAAAGGCAGAGACAAATACTTGCCAGGGTTCTGCATTGACACCCCAAACCCATAAGCTGAACCAGATATCCAATAACCCTTGCCAACCAAAGGTTATTCCAACGAGTAAAACAAACTTTGCTAGCCAACGAGAGAATAGAGCTGTGGAAGCTGAAGTAATACCCTCAGATCTAGATTCATGCCTGCAGCAGCATTCTGTTTCATGCAATGCAAGATCTGCTTTCAATAACTTGATTGGTTCTGGGTCTTTTGGTCAATCTGGTATAAGTGCTGATAATCTTACATTAATGGAGCAGCAAATCATATCAGCCATTGGGAATCGAGATAATGTTAATCCTTGTGTAAATGCCTCGAGTTCGTTGAACAAGTCTCAACTAAGAACAGATGGAGGCCATCTACTTGGCCACAATATGAGTTCTGGCAGTACTTCAATACTAGGAGGAATCCCAATACATGGTGGGATGAGTACTCTTTTGAGGTCAAATCTGATTACCAGTTCTGGTTCAAAATCTTCCCAAGCATCCACAGTTGATTTTTCTGGAGTAGGAGTTGGAATTGGACCTCAAAATTGTGATTCTTCAACTAAAGCTTTGGCAAATTTGACTAGTCAATCAGTAACCTTTCCCATACATGTAGAAGGTTCTAATCAGAAGATTCTTGTTTTAGATTTAAAGTGTGCTTCATCAAATCAAAAGATAGACTATGATTTGCTTCAGGCCCCTAACCCCCCCACTTTTCATGTTGAGGAACAAGTGCCCTTTAGTGGTCAAATCCCTGGTTTTACCCACGATTGCCTTCATAAAGATGGTAGTAGTCAATCTATGATGACAAAGGATCCTAAAGACAAACTAGATTATGCTAAACCTCCATCAGGTGATGACCTGTTTGATGTTTTAGGGGTGGATTTGAAAAACCAATTGCTGAATGGAAACTGGGATAATCTCTTTACTTATGAATCAGATGCTAATGCAGAAAATATGGAAAAAAAGATAGCACCTATGAACAAGGAGGGTGTAACAATAAATCCTGATATTTATTCAGTTAAAGAAACAATATCAGACAGTGACATTTTTTCTGGGATGGGAACAGACAACCTCTTGGATGCCGTGGTCTCAAAAGCCAAATCTATTGTGAAACTGGATTCTGATGACATGTCTTGCAGGACAACATTGACAAGGAATAGTACTGCCTCTGTTCCTTCTCCTGCCTGCAGGCCGGTAATGTCGGGTCATTTCCAGGGGGGATTGTTTGATTTTCCTAAGAATTGGGGTAAAACAGGTGCCATAGAAACTAGTTTGCTTAGGTCCGGATGTAACAAGGATGATGCTGGAAACTGTTCTCAAACTAGTTCTGTTTATGGCTCTCAACTTAGTTCATGGGTTGAGAATAGTGGGAGTGTGAAACATGAGAATATTGTTTCAACTGGATACTCAAAGCAGGCAGATGAGAGTTGCAAACCAAATCGTAAGAGGCTTAAACCAGGAGAGAATCCCCGGCCTCGACCGAAAGATCGTCAAATGATTCAAGATCGAGTGAAAGAGTTACGAGAAATTGTGCCAAACGGAGCAAAATGTAGCATAGATGCACTTTTGGAACGGACCATTAAGCACATGCTTTTCTTACAAAGTGTGACAAAGCATGCTGACAAGCTGAAACAAACAGGGGAGTCTAAGATTATTAATAAGGAAGGTGGGCTGCTTTTGAAAGACAACTTTGAGGGTGGGGCTACGTGGGCATATGAAGTTGGCTCACTATCAATGGTTTGCCCCATTGTAGTCGAGGATCTGATTCCACCTCGTCAGATGCTAGTGGAGATGCTTTGTGAGGAACGAGGTTGCTTTTTGGAAATAGCCGACTTAATCAGAGGATTAGGCTTAACCATCTTAAAGGGGGTAATGGAAGCTCACAATGACAAAATCTGGGCACGCTTTGCTGTTGAGGCAAACAGGGATATAACAAGGATGGAAATATTTATGTCACTTGTTTGTCTTTTGGAGCAAACGGTGAAGGGCAACACATCTTCATCCAATGCAATTGATAACATGGTGTATCACTCTTTCCCACAGGCTACGCAGACAACAGAAAGGTCTAGTAGTTTGCAGTGA 2898 0.4199 MLLFFHWVVEKEKKVRKFSRGFEMGFLLKEALRTLCGRNQWSYAVFWKIGCHNSKLLIWEECYYEPLPWPPHMFGMPDLPYQNGEGCWFSSESLSSQLGIQEEVRVSSLIKKMTVNNSVIIAGEGIIGRAAFTGSHQWILLNNFTEDAYPPQVYAEVHHQFSAGIQTVAVIPVLPHGVVQLGSFLPIIENMGFVNDVKSLIFQLGCVPGALLSEDYSPPIAGVPVSVDPPVIASNCPPSVTSGSNQQNNSSHASMSFSVQTPCPLKAETNTCQGSALTPQTHKLNQISNNPCQPKVIPTSKTNFASQRENRAVEAEVIPSDLDSCLQQHSVSCNARSAFNNLIGSGSFGQSGISADNLTLMEQQIISAIGNRDNVNPCVNASSSLNKSQLRTDGGHLLGHNMSSGSTSILGGIPIHGGMSTLLRSNLITSSGSKSSQASTVDFSGVGVGIGPQNCDSSTKALANLTSQSVTFPIHVEGSNQKILVLDLKCASSNQKIDYDLLQAPNPPTFHVEEQVPFSGQIPGFTHDCLHKDGSSQSMMTKDPKDKLDYAKPPSGDDLFDVLGVDLKNQLLNGNWDNLFTYESDANAENMEKKIAPMNKEGVTINPDIYSVKETISDSDIFSGMGTDNLLDAVVSKAKSIVKLDSDDMSCRTTLTRNSTASVPSPACRPVMSGHFQGGLFDFPKNWGKTGAIETSLLRSGCNKDDAGNCSQTSSVYGSQLSSWVENSGSVKHENIVSTGYSKQADESCKPNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIINKEGGLLLKDNFEGGATWAYEVGSLSMVCPIVVEDLIPPRQMLVEMLCEERGCFLEIADLIRGLGLTILKGVMEAHNDKIWARFAVEANRDITRMEIFMSLVCLLEQTVKGNTSSSNAIDNMVYHSFPQATQTTERSSSLQ* 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3264 965 MobiDBLite consensus disorder prediction 747 770 - -
Gso11g3264 965 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 28 200 IPR025610 -
Gso11g3264 965 CDD bHLH_AtLHW_like 760 829 - -
Gso11g3264 965 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 756 805 IPR011598 GO:0046983
Gso11g3264 965 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 24 965 IPR043561 GO:0003700|GO:0006355
Gso11g3264 965 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 24 965 - -
Gso11g3264 965 MobiDBLite consensus disorder prediction 740 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3264 Gso-Chr11 48459878 48467172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3264 544 946 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 50.976 9.47e-111 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3264 - - gmx:100791138 1912.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1590 12 39393878 39401548 Gso11g3264 11 48459878 48467172 GST
Gso11g3264 11 48459878 48467172 Gso12g0772 12 7841134 7848368 PCT
Gso11g3264 11 48459878 48467172 Gso11g1341 11 15060441 15067672 PCT
Gso12g0772 12 7841134 7848368 Gso11g3264 11 48459878 48467172 PCT
Gso11g1341 11 15060441 15067672 Gso11g3264 11 48459878 48467172 PCT