Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3257 ATGGATGTCGATTCCTCGATGGTGCCGGAGACCGATCACGATCCGGCCGCGCAGAACCACGCCGCCGCTGCTCCGGCTCCGGACGCGGCGGAGGGAGAGCAGCTAGCGGAGCCGCCGTCGTCCGGAGACGGATCTCCGGAGCAGGCGGCTGCTTCAGCGCCGCAGAGTCCGGTGGTCGGACCGAGGCTGGCGCCAACTTACACAGTGGTGAATGCAATTTTGGAGAAGAAGGAGGACGGACCGGGGCCGAGGTGCGGCCACACGTTGACGGCGGTGGCGGCTGTCGGAGAGGAGGGGACGCCGGGGTACATTGGTCCGAGGCTGATTTTGTTCGGTGGTGCCACTGCTCTTGAAGGCAATTCTGCGGCGTCAGGAACTCCTTCATCTGCTGGAAATGCTGGCATACGTTTAGCTGGTGCCACAGCTGATGTCCACTGTTATGATGTCTTGACTAATAAATGGTCTAGGATAACTCCCTTTGGAGAACCTCCTACTCCAAGGGCTGCACATGTGGCGACTGCTGTAGGAACTATGGTGGTTATTCAGGGTGGCATTGGTCCTGCTGGTTTGTCAGCAGAGGACCTTCATGTTCTTGATCTCACTCAGCAATGGCCACGCTGGCATAGAGTGTCTGTTCAGGGACCTGGACCCGGGCCACGCTATGGACATGTAATGGCTTTGGTGGGGCAGAGGTATCTAATGGCAATTGGAGGCAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCCTTGGACACAGCTGCTAAGCCTTATGAATGGCGCAAGCTAGAGCCAGAAGGAGAGGGCCCGCCTCCTTGCATGTATGCAACTGCAAGTGCACGCTCTGATGGACTTCTTCTGCTTTGTGGAGGCAGGGATGCCAATAGTGTTCCATTGTCAAGTGCATATGGACTTGCTAAACATAGAGATGGTCGTTGGGAATGGGCAATTGCCCCAGGTGTCTCACCATCACCAAGATATCAGCATGCAGCGGTATTTGTTAATGCAAGGCTCCATGTGTCTGGTGGGGCTCTTGGTGGAGGACGGATGGTTGAAGACTCATCAAGTGTTGCAGTATTGGACACTGCTGCTGGTGTTTGGTGTGATACAAAATCTGTTGTTACCAGTCCAAGAACTGGTAGATACAGTGCTGATGCAGCAGGAGGAGATGCTGCAGTTGAGTTGACTCGGCGTTGTAGGCACGCAGCTGCTGCTGTTGGTGACCTAATTTTTATTTATGGTGGTTTACGTGGGGGAGTCTTGCTAGATGACCTACTTGTTGCTGAAGATCTTGCTGCTGCTGAAACAACAGCTGCATCTAATGTACAAGCAGGACGCTTACCTGAACGATATGGATTTGCTGATGATAGAACGAGGGAAACAATGCCTGAGGCGGCTGCTGATGGTTCTGTTGTTTTGGGAAATCCTGTTGCGCCACCAATGAATGGTGACATTTATACTGATATCAGCACTGAAAATGCCATGCTTCAGGGACCTCGGCGAACTGCTAGAGGTGTGGAGTATCTGGTTGAAGCATCAGCTGCAGAAGCTGAAGCTATCAGTGCAGCACTGGCTGCTGCCAAGGCACGGCAGGAGAATGGAGAAGTTGAATTGCCTGACAGAGACCGTGGGGCGGAGGCTACCCCAAGCGGGAAAGAAACATCTTCCTTGATTAAGCCTGATTCTGCAGGTTCAAATAACATTACTCCTGGTGGAGTTCGGCTGCATCACAGAGCTGTGGTTGTTGCTGCAGAGACTGGTGGAGCATTAGGTGGCATGGTTAGACAGCTTTCAATAGATCAATTTGAAAATGAAGGCAGGCGGGTTGGTTACGGGACTCCAGAAAATGCAACTGCTGCCAGGAAATTATTAGATCGACAGATGTCTATCAATAGTGTGCCAAAAAAGGTCATTGCACACCTCTTAAAGCCTCGTGGATGGAAACCACCAGTACGCCGGCAGTTTTTCTTAGATTGTAATGAAATTGCTGATCTTTGTGACAGTGCTGAGCGGATATTTTCAAGTGAACCAAGTGTCTTGCAACTTAGGGCACCAATTAAAATATTTGGTGATCTACATGGACAGTTTGGTGATCTCATGCGCCTTTTTGATGAGTATGGTGCACCATCAACTGCTGGTGACATTGCATATATCGATTATCTATTCCTAGGAGATTATGTTGATCGGGGACAGCACAGCTTGGAAACTATAACCCTTCTTCTTGCTCTGAAGGTTGAGTATCCCAACAATGTACATTTAATACGTGGAAACCACGAAGCTGCAGATATTAATGCACTGTTTGGTTTCCGAATTGAGTGCATAGAGAGGATGGGTGAGAGAGACGGAATTTGGACATGGCATCGGATAAACAAGCTGTTTAATTGGCTTCCTCTGGCAGCTTTAATTGAGAAAAAAATTATTTGCATGCACGGTGGTATTGGTCGTTCAATAAATCATGTAGAACAGATTGAAAACATTCAGCGTCCAATTCCTATGGAAGCTGGATCAATTGTGCTTATGGATCTATTGTGGTCTGATCCTACAGAGAATGACAGTGTGGAAGGATTGCGACCAAATGCTAGAGGTCCTGGATTAGTTACTTTTGGGCCTGATCGGGTCATGGAATTTTGTAACAACAATGATCTTCAGTTGATTGTTCGTGCACATGAATGTGTGATGGATGGGTTTGAGCGTTTTGCTCAGGGACATTTGATCACACTTTTTTCAGCGACTAATTATTGTGGTACCGCAAATAATGCTGGGGCAATATTAGTTTTGGGTAGAGACCTCGTTGTTGTTCCTAAACTTATCCATCCATTACCACCAGCAATTTCTTCACCAGAAACATCACCAGAACGTCATATTGAAGATACATGGATGCAGGAGTTGAATGCTAACAGACCACCAACGCCAACTAGAGGTCGCCCCCCAGTAACAAATGACCGAGGTTCGCTGGCTTGGATATAG 2967 0.4897 MDVDSSMVPETDHDPAAQNHAAAAPAPDAAEGEQLAEPPSSGDGSPEQAAASAPQSPVVGPRLAPTYTVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQWPRWHRVSVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTAASNVQAGRLPERYGFADDRTRETMPEAAADGSVVLGNPVAPPMNGDIYTDISTENAMLQGPRRTARGVEYLVEASAAEAEAISAALAAAKARQENGEVELPDRDRGAEATPSGKETSSLIKPDSAGSNNITPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVGYGTPENATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINKLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPIPMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPPVTNDRGSLAWI* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3257 988 Pfam Galactose oxidase, central domain 219 272 - -
Gso11g3257 988 MobiDBLite consensus disorder prediction 1 62 - -
Gso11g3257 988 Gene3D - 65 190 IPR015915 GO:0005515
Gso11g3257 988 SUPERFAMILY Kelch motif 139 428 IPR015915 GO:0005515
Gso11g3257 988 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 982 - -
Gso11g3257 988 Pfam Calcineurin-like phosphoesterase 685 892 IPR004843 GO:0016787
Gso11g3257 988 MobiDBLite consensus disorder prediction 964 988 - -
Gso11g3257 988 PRINTS Serine/threonine phosphatase family signature 685 712 IPR006186 GO:0016787
Gso11g3257 988 PRINTS Serine/threonine phosphatase family signature 720 747 IPR006186 GO:0016787
Gso11g3257 988 PRINTS Serine/threonine phosphatase family signature 753 777 IPR006186 GO:0016787
Gso11g3257 988 PRINTS Serine/threonine phosphatase family signature 791 817 IPR006186 GO:0016787
Gso11g3257 988 PRINTS Serine/threonine phosphatase family signature 881 901 IPR006186 GO:0016787
Gso11g3257 988 PRINTS Serine/threonine phosphatase family signature 903 919 IPR006186 GO:0016787
Gso11g3257 988 MobiDBLite consensus disorder prediction 531 571 - -
Gso11g3257 988 Pfam Kelch motif 325 371 IPR011498 GO:0005515
Gso11g3257 988 SMART pp2a_7 657 941 IPR006186 GO:0016787
Gso11g3257 988 Gene3D - 622 959 IPR029052 -
Gso11g3257 988 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 982 - -
Gso11g3257 988 SUPERFAMILY Metallo-dependent phosphatases 642 948 IPR029052 -
Gso11g3257 988 PIRSF STPPP_BSU1 32 988 IPR012391 GO:0004721|GO:0009742
Gso11g3257 988 ProSitePatterns Serine/threonine specific protein phosphatases signature. 754 759 IPR006186 GO:0016787
Gso11g3257 988 CDD MPP_Bsu1_C 637 939 IPR041758 -
Gso11g3257 988 Gene3D - 191 444 IPR015915 GO:0005515
Gso11g3257 988 MobiDBLite consensus disorder prediction 549 569 - -
Gso11g3257 988 MobiDBLite consensus disorder prediction 533 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3257 Gso-Chr11 48357809 48368342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3257 649 884 Calmodulin-binding Proteins AT5G63870 29.412 3.38e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3257 - - gmx:100776048 1901.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1597 12 39503663 39515553 Gso11g3257 11 48357809 48368342 GST
Gso11g3257 11 48357809 48368342 Gso12g0777 12 8028120 8042455 PCT
Gso11g3257 11 48357809 48368342 Gso11g1332 11 14729711 14744206 PCT
Gso12g0777 12 8028120 8042455 Gso11g3257 11 48357809 48368342 PCT
Gso11g1332 11 14729711 14744206 Gso11g3257 11 48357809 48368342 PCT