Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3224 ATGGCGACACTGGATTCCGACGTGACCATGGTTCCGGCCGGCGAACCCTCCACCAGCGCCGGTCCTTCTTCGTCCACCAAGAAGCCGAAGCGATTCGAGATCAAGAAGTGGAATGCCGTTTCTCTCTGGGCTTGGGATATTGTTGTGGATAATTGCGCTATTTGCCGCAACCATATCATGGATCTCTGTATTGAGTGCCAGGCCAACCAGGCTAGCGCCACTAGCGAGGAATGCACTGTAGCTTGGGGAGTTTGTAACCATGCTTTTCACTTCCATTGCATAAGCCGATGGCTCAAGACCCGTCAAGTATGTCCTCTAGATAATAGCGAGTGGGAGTTTCAGAAATACGGTCACTAG 357 0.5182 MATLDSDVTMVPAGEPSTSAGPSSSTKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3224 118 PANTHER RING BOX 1 118 - -
Gso11g3224 118 CDD mRING-H2-C3H2C2D_RBX1 50 111 - -
Gso11g3224 118 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 19 118 IPR013083 -
Gso11g3224 118 SUPERFAMILY RING/U-box 30 115 - -
Gso11g3224 118 Pfam RING-H2 zinc finger domain 50 108 IPR024766 GO:0008270
Gso11g3224 118 ProSiteProfiles Zinc finger RING-type profile. 63 108 IPR001841 -
Gso11g3224 118 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RBX1 1 118 - -
Gso11g3224 118 MobiDBLite consensus disorder prediction 12 26 - -
Gso11g3224 118 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3224 Gso-Chr11 47971845 47974145 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3224 K03868 - gmx:100526919 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1643 12 40035819 40038124 Gso11g3224 11 47971845 47974145 GST
Gso11g3224 11 47971845 47974145 Gso12g0825 12 8785643 8788640 PCT
Gso11g3224 11 47971845 47974145 Gso6g2494 6 46696918 46700035 PCT
Gso12g0825 12 8785643 8788640 Gso11g3224 11 47971845 47974145 PCT
Gso6g2494 6 46696918 46700035 Gso11g3224 11 47971845 47974145 PCT