Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3216 ATGGGAAGCAACTTGAGGTTTTTGAGTCTTTGCCTCTTGGCATTGATTGCATCAACTCATGCTCAACTTCAGCTTGGTTTTTATGCTAACAGTTGCCCAAAAGCAGAGCAAATTGTTTTGAAATTTGTTCATGACCATATCCACAATGCTCCATCACTAGCAGCTGCATTAATAAGAATGCACTTTCATGACTGTTTTGTAAGGGGATGTGATGCATCAGTCCTTCTGAACTCAACAACCAATCAGGCTGAGAAGAATGCTCCTCCAAATCTCACAGTAAGAGGCTTTGACTTCATTGACAGAATAAAGAGCCTTGTTGAAGCTGAATGCCCTGGTGTGGTCTCTTGTGCTGATATCCTCACTTTGGCTGCCAGAGACACTATTGTAGCCACAGGTGGACCTTTTTGGAAAGTTCCAACTGGTCGAAGGGATGGGGTCGTCTCTAACTTGACGGAAGCCAGAAATAACATTCCTGCTCCATCTTCCAACTTTACCACCCTACAAACACTCTTTGCTAACCAAGGACTTGATTTAAAGGACTTGGTCCTGCTCTCTGGTGCTCACACAATTGGTATCGCTCATTGCTCATCATTATCAAACCGGTTGTTCAATTTCACTGGCAAGGGTGATCAAGACCCGTCACTAGATAGTGAATATGCTGCAAATTTGAAAGCATTCAAGTGCACAGACCTCAACAAGTTGAACACCACAAAAATTGAGATGGACCCTGGAAGTCGCAAGACATTTGATCTTAGCTACTATAGTCACGTTATTAAGAGAAGGGGTCTATTTGAGTCAGATGCTGCATTATTGACTAACTCAGTTACAAAGGCACAAATCATCCAATTGCTTGAAGGGTCAGTTGAAAATTTCTTTGCTGAGTTTGCAACCTCCATCGAGAAAATGGGAAGAATTAATGTGAAGACAGGGACAGAAGGAGAGATCAGGAAGCATTGTGCATTTATAAATAGCTAA 975 0.4215 MGSNLRFLSLCLLALIASTHAQLQLGFYANSCPKAEQIVLKFVHDHIHNAPSLAAALIRMHFHDCFVRGCDASVLLNSTTNQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADILTLAARDTIVATGGPFWKVPTGRRDGVVSNLTEARNNIPAPSSNFTTLQTLFANQGLDLKDLVLLSGAHTIGIAHCSSLSNRLFNFTGKGDQDPSLDSEYAANLKAFKCTDLNKLNTTKIEMDPGSRKTFDLSYYSHVIKRRGLFESDAALLTNSVTKAQIIQLLEGSVENFFAEFATSIEKMGRINVKTGTEGEIRKHCAFINS* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3216 324 PANTHER PEROXIDASE 25-RELATED 10 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g3216 324 CDD secretory_peroxidase 22 322 IPR033905 GO:0004601|GO:0042744
Gso11g3216 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Gso11g3216 324 ProSiteProfiles Plant heme peroxidase family profile. 22 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g3216 324 Gene3D Peroxidase, domain 2 158 302 - -
Gso11g3216 324 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g3216 324 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g3216 324 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g3216 324 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g3216 324 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g3216 324 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g3216 324 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g3216 324 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g3216 324 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso11g3216 324 SUPERFAMILY Heme-dependent peroxidases 22 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso11g3216 324 Pfam Peroxidase 41 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g3216 324 Gene3D - 27 323 - -
Gso11g3216 324 PANTHER PEROXIDASE 10 323 - -
Gso11g3216 324 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g3216 324 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g3216 324 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g3216 324 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g3216 324 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso11g3216 324 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3216 Gso-Chr11 47917669 47919567 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3216 8 324 Peroxidase AT1G05260 68.770 4.48e-167 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3216 K00430 - gmx:547872 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1650 12 40108890 40111145 Gso11g3216 11 47917669 47919567 GST
Gso11g3216 11 47917669 47919567 Gso12g0831 12 8952776 8955287 PCT
Gso11g3216 11 47917669 47919567 Gso6g2488 6 46641863 46644522 PCT
Gso12g0831 12 8952776 8955287 Gso11g3216 11 47917669 47919567 PCT
Gso6g2488 6 46641863 46644522 Gso11g3216 11 47917669 47919567 PCT