Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3198 ATGGGCGATGGAGGCGTCGCGTGCATGCCCTTGCAGTATATTATGGAGAGGTTGCCGAGTGCTGAGAAGACTGTTTGCCGAGGCAAGAGTGGGAATGGCTTCAATTCCAAGTTGCTCAAGTTTGCTGGCAAGGAGAGGAGGAAGATGAAGCCGAGGAAGAGCGAATTGGGGTTGGACAGAGTGAGCAAGAGAAACAGCAGCAGCAACGATGTTGAGAATGGTGGCGAAGTGGAGAAGAAGCAGCAGCATGAGAAGGTGCAGAAGGAGGAGGTGGAGGAGGGTGAATTGGGCACTTTGAAGTGGCCAAGAGCTGACCTGGAGAATGGGGAGTTTGTGCCGGAGATGCTGCCACTGCCGCCACCGAGGAGAGGCGAGGTTGAGAACGGGGAGATTGTTAGTGAGAAGTGGAAAGCTAGGGAGCTGGAGAAAGGAGAGATTGGTTTTGGGAAATGGAGGAAAGAGGAGGTGGAAAGAAGGGAGATAGTGAGTGAGAAGGGTGGTAGGAAAGGGGAAGCTGAGAGAGGTGAATATGGGTCGTGGAGAGGAGGAAAAGATGAAATTGAGAAGGGAGAGTTCATTCCAGATAGATGGTATAAGGGAGATTATGATAACAGTAGAAACCGCAGGCACCATTCAGGTAGGGACAAAGGGTGGAAAGCTGAACGTGAACATGAAAGTACACCTTCTTCTGGGAGATATACAGGGGATGACTTTTTTAGAAAGAAGGAGTTGAATAGAAGTGGGAGTCAGCATGTTAAAAGTTCTCCCAGGTGGGAGGGTGGTGGACAACAGCGGAATGTAAGGATCAGTTCAAAGATTGTGCATGACGAGAAGAATGTACACAGCAATGGTAAGGACCATACACGAGATTACTCTTCTGGAAGTCGCTTGAAGAGGCTTGGCAATGATACTGACAGCTATGAGCGGAAGCAATCTGCAGATTATGCCGGATTGAAAAGCAGAAGGCTTTCTGATGATAGCTGTCGCCAAGTTTATTCGGAGAACTATTCTTGTCATTCTCCTCGCTCTGTGGAACGGTCTTACAGGAATAATAATGGTACAAAATTATCAGCAGACAAGTATTCTTGTAGGAATCATGAATCTTCTTTGTCCACCAGACCAGCTTATGACCGGCATGGACGCAGCCCTGGTCATTCTGAGCGGTCCCCACGAGACCGAGGTAGGCATTATGATCATAGGGAGCGCACTCCAGTGCGTCGGTCTCCCTGTGGTCGTGACAGATCTCCATATAACTGGGAGAAATCCCCCTATGGCCGGGAGAAGTCCCCATATATGAGGAACTGGGATAGAAGTCGTCAGCACGATCATAAATTGAGAAGTCCAACGCATGCTGAGCAGTCGCCACCAGATCGAAGTCGGCGTCATGATCGCAGGGATTGTACCCCAAATTTGGCAGAAGCATCTCCCCTTGACCGAGCAAGGAAAAACAGTCGACATGAATCAAGTAGTAAAACCTTATCAAGTGAAAAACATGATTCCCAAAATAGTTGTAAGGATCGTGAAGATAAGCAGATTCAAAGGGAATCAAATTGTTCAAGTACAGAATCTCAAAGTGAAAAAAGTGTGCAAGTTACCATTAAATCTGTTGAGAAAGACATCTGCAGTGAACCTGTAAAGGAACAGCAGAGTTGCAGCCCAACTGTTAGCCACAAAGAATCTCCTCACTCGGAGCCCCCCCCTGAGGAGCTGCCTTCAATGGAGGAAGATATGGACATTTGTGATACCCCGCCACATGTCCCTGTGGTGACAGATTTGTCATCAGGGAAATGGTATTACCTCGACTATGGTGGTGTAGAAAATGGGCCTGCTAAATTGTGTGACATCAAGGTCCTTGTTGACGAAGGTGTACTAATGTCTGATCACTTCATCAAGCACTTAGATAGTGACAGGTGGTTAACAGTTGAAAATGCTGCGTCACCTTTGGTACGTCAGAGCTTTCCATCAATTGCGTCTGATACCATAACTCAACTGGTAAATCCTCCAGAAGCTCCTGGTAATATCTTGTCTGATGCGGCAGATATTCTTCATTCTGCTCCTGATAATCACCAGGAAATGCTAACTCCCTTGCGGCAGCCACGAGTTTGCCCTAATGACAGTGTGTTTACATTTGAACTTTTGGAGGACCTCCACATAGAGGAAAGAGTTAGAAATCTGTTAGAGGGTTATGATGTCACTCCTGGGATGGAACTTGAGGCAATAAAAGAAGCGTTGCAAATGAATTTTGAAAATGCAAAAGGGGAAGGATTGGAAGACTATGAAGGCTTTCTTTGGAGTGTTTCCTGCGATGGGGAAGATTGGGATTCAAGTACTGATTTAGCATCAAGAGATTCTGAATCTCAGTCAAGTATGTCCTGTGATAAGGATAATGGACATGCCTTCGGTATTTCTAGTGACTGGTTTTCCACCCGTTGGTCATGTAAAGGTGGTGACTGGAAGAGGAATGATGATGCCCAAGATAGATATTCAAGAAAGAAACTTGTCCTAAATAATGGTTTTCCTTTATGTCAAATGCCAAAGTCTGGATGTGAAGATCCTCGTTGGCCTCAAAAAGATGACTTGTATTTTCCTTCTCAAAGCAGGAAGCTTGATCTTCCTCTGTGGGCTTTCTGTGCTGATGAGCGGGATGATTGCAGTGTTGCAAGCAAATCAGTTCAAAGTAAGCCTGCTTCTGTGAGAGGAGTGAAAGGCAATGTTCTTTCGGTGGTCAGGATAAATGCATGTGTAGTTAAGGACCAGGGATCATTGGTCTCTGAGTCACGCCACAAGACTAGGGTCAAGGAAAGACATCATTCAAGGCCAGCTCGGCCCTTCTCTTCAATCAGTGATAGCAAGAGATCATCAACTGAACAAGATCAGTCAAAAGCTGTTAGTGATCAAGTTTCTTACCAGATCTTGGAATTCATTAACACCCCTAAAGATCATCGTTGTACTTTCCGGGAGTTGCAATTACATTTGGGTGACTGGTATTATCTTGATGGTTCTGGGCGTGAAAGGGGACCATCATCATTTTCAGAGTTACAGTATTTCGTAGATCAAGGTATCATAAAAAAACATAGTAGTGTGTTCAGGAAAAGTGATAAACTATGGGTTCCTATTACCTCTGCAACAGAAACTTCTGATGGCAGTCTCACGGACCAGCAAGAAAGCAGTTCGATATCTGGTGCGTGCTCTGGTTTTCCATCAAAGCAAACTCAAGTTGTTTCATGTGGCGAACCTTACACAAATTCAAGTTTATTTAACAGCTTACATCCTCAGTTTGTTGGTTATACTCGTGGGAAGCTACATGAACTGGTAATGAAATCATATAAAAGCCGGGAGTTTGCTGCAGCTATAAATGAGGTTTTAGATCCCTGGATCAATGCAAGACAACCAAAGAAGGAAATTGAAAAACAAATATATTGGAAATCAGAAGGCGATGCACATGCTGCCAAAAGAGCCCGGATGCTGGTTGATGATAGTGAAGATGACATTGATTTGGAAGATGGGGATGTTAATATCGAGAAGGATGAATCCACTTTTGAAGATCTATGTGGTGATGCTACTTTCCCTGAAGAAGAAATTGGTATTACTGATACTGATTTGGGAAGCTGGAGCAATTTGGATGGTCATGTGTTAGCACGGGTCTTCCATTTTTTGAAATCTGATTTGAAGTCCCTTGTTTTTGCTTCAATGACTTGCAAGCACTGGAGAGCTGCTGTAAGGTTTTATAAAGAAGTGTCAATACAGGTCAATTTATCATCCTTAGGTCATTCCTGCACCGATACCATGTTGTGGAACATTTTGAATGCTTACGAAAAAGACAAGATCAATTCTGTTATTCTAAGGGGTTGTGTCAATATTACGGCTGACATGCTTGAGAAAATTCTTTTTTCATTTCCTGGTTTATTTACAATAGACATTAGAGGGTGCAACCAGTTTGGAGAGCTGACTCTTAAATTTGCCAATGTGAAATGGATCAAGAGCCGAAGTTCCCACTTGACTAAAATTGCAGAGGAGTCTCATAAAATTAGAAGCCTTAAACATATTACAGAGCTAACCTCATCTGTTTCCAAATCCATTAGTTTAGGTATAGATGATTTTGGTCAATTGAAGGATTACTTTGATAGTGTGGATAAGAGAGATAACAAGCAGTTATTCCGTCAAAACTTGTACAAGCGGTCAAAACTATACGATGCTAGAAAGTCCTCCTCCATTCTATCCAGGGATGCTCGTACAAGACGTTGGGCAATCAAGAAATCTGAAAGTGGTTATAAGAGAATGGAGGAATTCCTTGCTTTAAGACTAAGGGAAATTATGAAGACAAACTCTTGCGACTTTTTTGTGCTGAAGGTTGCAGAAATTGAGGCTAAAATGAAAAGTGGTTATTATAGTAGTCGTGGGTTGAATTCTGTGAAAGAGGACATAAGTAGAATGTGCCGTGATGCAATAAAAGTGAAGAATCGAGGTGATGCTAGTGACATGAATCATATTATCACATTGTTTATTCAGCTTGCAACACGGCTGGAAGAGAGTTCTAAATCTGTGCAGGATAGAAATGCGCTACTGAAATCATGGGACAATGACTTGCCTGCAGGGTCCTGTTCTACTTTCTCAAAGTATAAGAAGAATAGATTGGTGAATGAAAGGAAGTATAGGAGTAATGGAACTCATGGTGGTTTGGATAATGTCGAATATACCTCTGATAGAGAAATTAGGAGGCGCTTATCAAAGTTGAACAAGAAATCTATGGACTCGGAGAGTGAAACATCTGATGATGATCTTGATAAGTCTTATGAAGAAGGGAAGAGTGACACTGATACTACAACATCTGACTCTGAAAGTGACCGAGAAGTACATCCAGAAAGTCTAAGTAGGGAGTCAAGAGGGGATGGATACTTTACGTCTGAGGAAGAGTTGGGTTTTATAACTGATGATCGAGAGTGGGGTGCTCGCATGACAAAAGCAAGTCTAGTTCCTCCAGTTACTAGGAAATATGAAGTCATTGACCAATATTGCATTGTAGCTGATGAGGAGGATGTGCGAAGGAAGATGAGGGTTTCATTACCAGATGACTATGCTGAGAAGCTGAGTGCACAAAAGAATGGCACTGAGGAGTCAGATATGGAACTTCCTGAAGTAAAAGATTACAAACCTAGAAAGCAACTAGGAAATGAGGTTATTGAGCAAGAAGTTTATGGAATTGATCCTTATACACACAATCTTTTGCTTGATTCTATGCCAGAGGAGTTAGATTGGTCTCTGCAGGAGAAGCATTTGTTTATAGAAGATACACTCCTTCGAACATTGAATAAGCAAGTTAGGAATTTTACTGGAAATGGAAGTACTCCGATGAGCTACTCGTTGCGGTCTGTTATTGAAGATATTAAAAAGTTCGCCGAGGAGGATTGTGATGCGAGAATGGTTAAAATGTGCCAAGGTATTCTAAAGGCCATAGACAGTCGTCCAGATGACAAATATGTAGCTTATAGGAAGGGGCTTGGTGTTGTTTGCAACAAGGAAGAAGGCTTTGCTGAAGATGATTTTGTTGTGGAGTTTCTGGGAGAGGTTTATCCTGTGTGGAAGTGGTTTGAGAAACAAGACGGGATTCGATCTCTGCAGAAAGATAGTAAAGATCCAGCACCAGAATTCTATAACATCTACCTTGAGAGGCCAAAGGGTGATGCTGATGGGTATGACCTAGTTGTTGTTGATGCCATGCACATGGCTAATTATGCCAGTCGAATATGTCATTCTTGCCGACCTAATTGTGAAGCCAAGGTTACCGCTGTTGATGGTCAATATCAAATTGGTATTTATAGTCTTCGTGAAATTCAACATGGTGAGGAGATCACTTTCGACTATAATTCTGTAACAGAGAGCAAGGAGGAGTATGAAGCGTCAGTTTGTTTGTGTGGAAGCCAAGTATGCCGAGGGAGCTATCTGAATCTGACTGGTGAAGGAGCTTTCCAAAAGGTTCTGAAGGACTCTCATGGAATTCTCGATCGGCATTGTTTGATGCTAGAAGCTTGTGAATTAAATTCTGTGTCTGAAGAGGACTATAATGACCTGGGAAGAGCTGGTTTAGGCAGTTGTTTGCTCGGAGGCCTGCCAGATTGGCTTGTTGCGTATGCGGCTCGCCTTGTGAGATTCATCAATTTTGAAAGAACAAAACTTCCTGAAGAAATTCTAAAGCATAATCTAGAAGAAAAAAGAAAATATTTTTCAGATATAATTCTTGAAGTTGAAAGGAGTGATGCCGAGGTTCAGGCTGAGGGAGTATACAACCAAAGGCTTCAGAATCTTGCTGTCACTCTTGATAAGGTAAGGTATGTTATGAGATGTATTTTTGGCGATCCACGGAAAGCACCACCTCCTCTTGAGAAGCTCAGTCCTGAAGCAACTGTTTCCTTTCTCTGGAAAGGAGAGGGTTCATTTGTTGAGGAGCTTGTTCAGTGCATAACTCCTCATGTTGAAGAAGGCATCTTGAATGATCTCAAGTTTAAAATTCATGCTCACGATCCTTCAAATTCTGGAGATATTCAAAAAGAGCTTCGTAAATCTCTGTTATGGTTGAGGGATGAGGTCCGAAATCTTCCTTGTACATATAAATGTCGGCATGATGCTGCTGCTGACTTAATCCATATTTACGCTTATACCAAGTACTTCTTTAGAATACGGAATTATCAAACCATTACATCACCACCTGTCTATATTAGTCCACTTGACTTAGGTCCCAAGTACACTAACAAGCTGGGAGCAGAATTTCAGGAGTATCGAAAGATATATGGTGAAAATTATTGTTTAGGACAGCTGATATTTTGGCATAACCAGAGTAATGCAGATCCTGATCGTAGCCTGGCTAGAGCCAGCAGGGGTTGCTTGTCTTTACCAGACACCAATTCCTTTTATGCCAAGGCTCAGAAGCCATCACGACATTGTGTTTATGGTCCAAGGACCGTTAGATCTATGCTGGCTAGAATGGAGAAGCTGCCGCAGAGATCTTGGCCCAAAGACCGGATATGGTCATTCAAAAGTTCTCCGAAATTCTTTGGTAGCCCAATGTTAGATGCTGTAGTTAATAACTCTCCGCTGGACAGGGAGATGGTTCATTGGTTTAAGCACAGACCTGCCATATTCCAAGCCATGTGGGATCGTTAA 7158 0.4282 MGDGGVACMPLQYIMERLPSAEKTVCRGKSGNGFNSKLLKFAGKERRKMKPRKSELGLDRVSKRNSSSNDVENGGEVEKKQQHEKVQKEEVEEGELGTLKWPRADLENGEFVPEMLPLPPPRRGEVENGEIVSEKWKARELEKGEIGFGKWRKEEVERREIVSEKGGRKGEAERGEYGSWRGGKDEIEKGEFIPDRWYKGDYDNSRNRRHHSGRDKGWKAEREHESTPSSGRYTGDDFFRKKELNRSGSQHVKSSPRWEGGGQQRNVRISSKIVHDEKNVHSNGKDHTRDYSSGSRLKRLGNDTDSYERKQSADYAGLKSRRLSDDSCRQVYSENYSCHSPRSVERSYRNNNGTKLSADKYSCRNHESSLSTRPAYDRHGRSPGHSERSPRDRGRHYDHRERTPVRRSPCGRDRSPYNWEKSPYGREKSPYMRNWDRSRQHDHKLRSPTHAEQSPPDRSRRHDRRDCTPNLAEASPLDRARKNSRHESSSKTLSSEKHDSQNSCKDREDKQIQRESNCSSTESQSEKSVQVTIKSVEKDICSEPVKEQQSCSPTVSHKESPHSEPPPEELPSMEEDMDICDTPPHVPVVTDLSSGKWYYLDYGGVENGPAKLCDIKVLVDEGVLMSDHFIKHLDSDRWLTVENAASPLVRQSFPSIASDTITQLVNPPEAPGNILSDAADILHSAPDNHQEMLTPLRQPRVCPNDSVFTFELLEDLHIEERVRNLLEGYDVTPGMELEAIKEALQMNFENAKGEGLEDYEGFLWSVSCDGEDWDSSTDLASRDSESQSSMSCDKDNGHAFGISSDWFSTRWSCKGGDWKRNDDAQDRYSRKKLVLNNGFPLCQMPKSGCEDPRWPQKDDLYFPSQSRKLDLPLWAFCADERDDCSVASKSVQSKPASVRGVKGNVLSVVRINACVVKDQGSLVSESRHKTRVKERHHSRPARPFSSISDSKRSSTEQDQSKAVSDQVSYQILEFINTPKDHRCTFRELQLHLGDWYYLDGSGRERGPSSFSELQYFVDQGIIKKHSSVFRKSDKLWVPITSATETSDGSLTDQQESSSISGACSGFPSKQTQVVSCGEPYTNSSLFNSLHPQFVGYTRGKLHELVMKSYKSREFAAAINEVLDPWINARQPKKEIEKQIYWKSEGDAHAAKRARMLVDDSEDDIDLEDGDVNIEKDESTFEDLCGDATFPEEEIGITDTDLGSWSNLDGHVLARVFHFLKSDLKSLVFASMTCKHWRAAVRFYKEVSIQVNLSSLGHSCTDTMLWNILNAYEKDKINSVILRGCVNITADMLEKILFSFPGLFTIDIRGCNQFGELTLKFANVKWIKSRSSHLTKIAEESHKIRSLKHITELTSSVSKSISLGIDDFGQLKDYFDSVDKRDNKQLFRQNLYKRSKLYDARKSSSILSRDARTRRWAIKKSESGYKRMEEFLALRLREIMKTNSCDFFVLKVAEIEAKMKSGYYSSRGLNSVKEDISRMCRDAIKVKNRGDASDMNHIITLFIQLATRLEESSKSVQDRNALLKSWDNDLPAGSCSTFSKYKKNRLVNERKYRSNGTHGGLDNVEYTSDREIRRRLSKLNKKSMDSESETSDDDLDKSYEEGKSDTDTTTSDSESDREVHPESLSRESRGDGYFTSEEELGFITDDREWGARMTKASLVPPVTRKYEVIDQYCIVADEEDVRRKMRVSLPDDYAEKLSAQKNGTEESDMELPEVKDYKPRKQLGNEVIEQEVYGIDPYTHNLLLDSMPEELDWSLQEKHLFIEDTLLRTLNKQVRNFTGNGSTPMSYSLRSVIEDIKKFAEEDCDARMVKMCQGILKAIDSRPDDKYVAYRKGLGVVCNKEEGFAEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKDSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHMANYASRICHSCRPNCEAKVTAVDGQYQIGIYSLREIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKDSHGILDRHCLMLEACELNSVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFINFERTKLPEEILKHNLEEKRKYFSDIILEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPRKAPPPLEKLSPEATVSFLWKGEGSFVEELVQCITPHVEEGILNDLKFKIHAHDPSNSGDIQKELRKSLLWLRDEVRNLPCTYKCRHDAAADLIHIYAYTKYFFRIRNYQTITSPPVYISPLDLGPKYTNKLGAEFQEYRKIYGENYCLGQLIFWHNQSNADPDRSLARASRGCLSLPDTNSFYAKAQKPSRHCVYGPRTVRSMLARMEKLPQRSWPKDRIWSFKSSPKFFGSPMLDAVVNNSPLDREMVHWFKHRPAIFQAMWDR* 2386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3198 2385 SMART set_7 1821 1961 IPR001214 GO:0005515
Gso11g3198 2385 MobiDBLite consensus disorder prediction 516 531 - -
Gso11g3198 2385 MobiDBLite consensus disorder prediction 426 469 - -
Gso11g3198 2385 MobiDBLite consensus disorder prediction 249 269 - -
Gso11g3198 2385 ProSiteProfiles SET domain profile. 1816 1955 IPR001214 GO:0005515
Gso11g3198 2385 MobiDBLite consensus disorder prediction 73 100 - -
Gso11g3198 2385 MobiDBLite consensus disorder prediction 925 962 - -
Gso11g3198 2385 MobiDBLite consensus disorder prediction 478 515 - -
Gso11g3198 2385 MobiDBLite consensus disorder prediction 329 370 - -
Gso11g3198 2385 MobiDBLite consensus disorder prediction 371 409 - -
Gso11g3198 2385 SUPERFAMILY SET domain 1830 1978 IPR046341 -
Gso11g3198 2385 MobiDBLite consensus disorder prediction 1595 1630 - -
Gso11g3198 2385 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 1 2384 - -
Gso11g3198 2385 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 1 2384 - -
Gso11g3198 2385 SUPERFAMILY F-box domain 1200 1241 IPR036047 GO:0005515
Gso11g3198 2385 MobiDBLite consensus disorder prediction 270 328 - -
Gso11g3198 2385 MobiDBLite consensus disorder prediction 157 248 - -
Gso11g3198 2385 MobiDBLite consensus disorder prediction 943 962 - -
Gso11g3198 2385 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1966 2385 IPR045606 -
Gso11g3198 2385 MobiDBLite consensus disorder prediction 1576 1630 - -
Gso11g3198 2385 MobiDBLite consensus disorder prediction 545 559 - -
Gso11g3198 2385 CDD SET_SETD2-like 1829 1977 - -
Gso11g3198 2385 MobiDBLite consensus disorder prediction 41 104 - -
Gso11g3198 2385 Gene3D SET domain 1801 1986 IPR046341 -
Gso11g3198 2385 Gene3D - 1203 1243 - -
Gso11g3198 2385 Pfam SET domain 1896 1955 IPR001214 GO:0005515
Gso11g3198 2385 MobiDBLite consensus disorder prediction 157 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3198 Gso-Chr11 47792369 47805047 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gso11g3198 SET 8.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3198 K22748 - gmx:100776205 4749.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1663 12 40202990 40217531 Gso11g3198 11 47792369 47805047 GST