Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3190 ATGAGAACTGGTGAGCTTCTGTTGTTCTTTTCCTTTCTTGTTTCTTTGGCGCTATGGTTCCAACTCTGTTTCGCTGGAGATACTTTGATCGCTGGCCAGGAGATAACTCAGAACAGGACTGGGAACCTTGTTTCATCTAGCCGCACATTTGAGCTGGGCTTCTTTTCTTTAAGTGGAGAAAAAAAATACTACTTGGGGATATGGTATCGCGAGTTGGAGAAGGAAACACAAAAAGCGGTATGGGTTGCCAATAGAGACAAGCCTGTTGAAGATTCCAGTAGAGTTTTTCGAATTGCAGAGGATGGAAATATGGTGGTAGAAGGTGCTTCATCAAAAAGATATTGGTCCTCTAAACTTGAAGCCTCCTCGTCCAAAAACACAACAGTGAAGCTCCTAGATTCAGGGAACCTAGTACTAATGGACGATAACTTGGGAATTACGAGTTACCTGTGGCAGAGCTTCCAAAACCCAACAGACACGTTTCTACCTGGCATGAAAATGGATGCAAATTTATCGTTGATTTCTTGGAAAGACGCCACTGACCCCTTGCCTGGGAACTTCTCCTTTAAGCTGATTCATGGTCAAAAGTTCGTAGTGGAAAAGCACTTAAAGCGTTACTGGACACTTGATGCAATTGATTATAGAATTGCTAGGTTGTTGGAAAACGCCACTTCGGGTAAAGTACCGTACAAATTATCAGGAATAACTTTATATCCAGAGAGACCTTACAGATACGGGAAATCAATGCTATTAATGAATTATAGCGGGGAGATACAATTTCTCAAGTGGGATGAGGATGACCGGCAATGGGATAAACGCTGGTCAAGGCCTGCTGACAAGTGCGACATATATAACTGTTGCGGGAGCTTCGGCTTCTGTAACAAAAATAATTTGAATCTGAATCTGGAGCCTTGCAGATGTTTACCAGGATTCCGTCGCCGGCCTGCCGGAGAAATCCAAGACAAAGGATGTGTTAGAAAATCAACATCATCGTGTATCGACAAGAAGGACGTGATGTTCCTGAACTTAACCAACATAAAAGTTGGTGATCTCCCAGACCAAGAATCCTTTGACGGAACAGAAGCAGAATGTCAATCATTATGCCTTAACAATAATACCAAGTGTTCTGAGTCTCAGTGCCAGGCATATTCATATAGTAATAGTACGTCATATGATCGAGATCACTCCTCGACATGCAAGATCTGGAGACGAGATTTATCTACTCTTCCAGAGAGGTACAATAGTGATTTTCTAGAGGAGTTCGTTCCTGGTCCTATTCTGTCTATCCTGGTTAAGAGATCAGATATAGTACCTTATGCAAAATCTTGTGAACCATGCGGCATATACGTGATTCCTTATCCGCTAAGCACTGGGCCAAACTGTGGAGACCCCATGTACAACAACTTCAATTGTAATAAATCGACAGGCCAAGTTACCTTCAAGATACTGGGAGGAACATCACACCAAGTTATTTGGATCGATGAAGATACCAGAATGTTTTACATTCAGCCAAATGGTTCATATCCCTGTAATTCCAGCAATCAAAATATCACGCCTAATTTTCCATTTAATGTAACTGATCAGTGTTCTGAAGCTGATGATGATGGAAAGATTAAAATTACTTGGCTACCAGCACCAGAACCGCCCTGTACTGAGCTAATAGATTGCCACAATTGGCCCCATTCGACATGCAGAGAAACAAGGGAAGGAGGAAGCAGGTGCCGTTGTGACTCAAACTATAAGTGGAATAACACAATCATGAGTTGCACCTTAGAGCATTCAACCAACCAGCTGGAATTGATTCTTATAGTAATTCTTAGTGGCATGGCTATTCTGGCATGCACAATAGCATTTGCCATAGTGCGGAGAAAGAAAAAAGCTCATGAGCTTGGTCAGGCAAATGCTCGGATTCAGGAGAGCTTATATGAGAGTGAAAGACATGTGAAAGGTTTGATTGGCTTAGGAAGTTTAGCAGAAAAAGACATTGAAGGCATTGAAGTACCCTGTTATACCTTTGCAAGCATTCTAGCAGCTACAGCTAATTTTTCAGATTCTAACAAACTTGGAAGAGGAGGTTATGGGCCTGTGTATAAGGGAACGTTTCCTGGAGGTCAAGATATAGCAGTAAAAAGGCTTTCAAGTGTTTCCACTCAAGGCTTACAGGAATTCAAGAATGAGGTTATTTTGATAGCAAAACTTCAACATCGGAACCTTGTTAGACTCAGGGGCTATTGCATAAAAGGAGATGAAAAAATCTTACTTTATGAATACATGCCAAACAAGAGCTTGGACTCATTTATATTTGACCGGACACGAACTTTACTCCTGGATTGGCCAATGCGGTTTGAGATAATTCTAGGCATTGCACGTGGCCTTCTCTATCTTCACCAAGACTCGAGATTGAGAGTGATTCATAGAGACCTCAAAACCAGCAACATTCTTCTAGATGAGGATATGAATCCAAAGATATCAGACTTTGGCCTTGCCAAAATATTTGGGGGAAAAGAAACTGAAGCAAGTACAGAGAGAATAGTTGGAACCTATGGATATATGGCTCCAGAGTATGCCTTGGATGGATTTTTTTCAATCAAGTCGGATGTTTTCAGCTTTGGAGTAGTCCTACTAGAGATTCTTAGTGGAAAAAAGAACACCGGGTTCTATCAGTCCAAACAAATTTCTAGCCTTTTGGGTCATGCATGGAAGTTATGGACAGAGAAGAAGCTACTGGATTTAATGGATCAATCCCTTGGTGAAACATGCAACGAAAATCAATTCATTAAATGTGCAGTTATTGGGCTATTATGTATACAAGATGAACCAGGTGATCGACCCACTATGTCAAATGTTTTGTACATGCTTGACATAGAGACAGCAACCATGCCAATTCCCACGCAACCAACCTTTTTTGTGAACAAGCATTTTTCTAGTTCAGCTTCCTCTTCTAGCAAACCAGAAATAAGTCTGCAATTTGAGAGTAGTTATCAAGAAGGTCGATAG 2997 0.4127 MRTGELLLFFSFLVSLALWFQLCFAGDTLIAGQEITQNRTGNLVSSSRTFELGFFSLSGEKKYYLGIWYRELEKETQKAVWVANRDKPVEDSSRVFRIAEDGNMVVEGASSKRYWSSKLEASSSKNTTVKLLDSGNLVLMDDNLGITSYLWQSFQNPTDTFLPGMKMDANLSLISWKDATDPLPGNFSFKLIHGQKFVVEKHLKRYWTLDAIDYRIARLLENATSGKVPYKLSGITLYPERPYRYGKSMLLMNYSGEIQFLKWDEDDRQWDKRWSRPADKCDIYNCCGSFGFCNKNNLNLNLEPCRCLPGFRRRPAGEIQDKGCVRKSTSSCIDKKDVMFLNLTNIKVGDLPDQESFDGTEAECQSLCLNNNTKCSESQCQAYSYSNSTSYDRDHSSTCKIWRRDLSTLPERYNSDFLEEFVPGPILSILVKRSDIVPYAKSCEPCGIYVIPYPLSTGPNCGDPMYNNFNCNKSTGQVTFKILGGTSHQVIWIDEDTRMFYIQPNGSYPCNSSNQNITPNFPFNVTDQCSEADDDGKIKITWLPAPEPPCTELIDCHNWPHSTCRETREGGSRCRCDSNYKWNNTIMSCTLEHSTNQLELILIVILSGMAILACTIAFAIVRRKKKAHELGQANARIQESLYESERHVKGLIGLGSLAEKDIEGIEVPCYTFASILAATANFSDSNKLGRGGYGPVYKGTFPGGQDIAVKRLSSVSTQGLQEFKNEVILIAKLQHRNLVRLRGYCIKGDEKILLYEYMPNKSLDSFIFDRTRTLLLDWPMRFEIILGIARGLLYLHQDSRLRVIHRDLKTSNILLDEDMNPKISDFGLAKIFGGKETEASTERIVGTYGYMAPEYALDGFFSIKSDVFSFGVVLLEILSGKKNTGFYQSKQISSLLGHAWKLWTEKKLLDLMDQSLGETCNENQFIKCAVIGLLCIQDEPGDRPTMSNVLYMLDIETATMPIPTQPTFFVNKHFSSSASSSSKPEISLQFESSYQEGR* 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3190 998 ProSiteProfiles Bulb-type lectin domain profile. 26 152 IPR001480 -
Gso11g3190 998 SUPERFAMILY Protein kinase-like (PK-like) 665 953 IPR011009 -
Gso11g3190 998 SMART serkin_6 682 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3190 998 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 17 996 - -
Gso11g3190 998 CDD PAN_AP_plant 334 407 - -
Gso11g3190 998 Pfam S-locus glycoprotein domain 248 313 IPR000858 GO:0048544
Gso11g3190 998 MobiDBLite consensus disorder prediction 976 998 - -
Gso11g3190 998 Pfam Protein tyrosine and serine/threonine kinase 685 950 IPR001245 GO:0004672|GO:0006468
Gso11g3190 998 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 996 - -
Gso11g3190 998 CDD STKc_IRAK 688 954 - -
Gso11g3190 998 SMART blect_4 32 157 IPR001480 -
Gso11g3190 998 ProSiteProfiles PAN/Apple domain profile. 332 422 IPR003609 -
Gso11g3190 998 SMART ntp_6 335 421 IPR003609 -
Gso11g3190 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Gso11g3190 998 Gene3D Phosphorylase Kinase; domain 1 656 757 - -
Gso11g3190 998 Pfam D-mannose binding lectin 80 171 IPR001480 -
Gso11g3190 998 CDD B_lectin 35 157 IPR001480 -
Gso11g3190 998 Gene3D - 22 155 IPR036426 -
Gso11g3190 998 ProSiteProfiles Protein kinase domain profile. 682 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3190 998 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 182 IPR036426 -
Gso11g3190 998 Gene3D Transferase(Phosphotransferase) domain 1 758 961 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3190 Gso-Chr11 47703412 47708818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3190 672 970 Receptor kinase-like Gene Family AT4G23140 59.016 4.42e-125 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso11g3190 PK_Tyr_Ser-Thr 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3190 - - gmx:100817898 2015.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1674 12 40356729 40361083 Gso11g3190 11 47703412 47708818 GST
Gso11g3190 11 47703412 47708818 Gso12g0850 12 9294865 9300317 PCT