Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3186 ATGCTTATGTTATGTTTGCTGAACACAATGGTCCCCAATAGCGCTTTTACTATTCTTCTTGGTTCGGTTCCGACACGAGTTGGACCTGTTCCATTCATCATTTCTTTGTTATTAATTTGTTTGCTCCACTGCAGTCTGCAGTTGCTCATTGGAGTCAGAGCCACACCGATGTACAGCATGAGAAACCAACGGTTCTGCGTGTATCTTCTCACCCTCTTTTTCAATTTGTTCACCCACAATTTTCTTGCAGCTCTCACAACCATTTCTACAAACCAAACTCTCACTGGAGATCAAACTCTAGTTTCTGAAGCTGGGGTCTTCGAACTGGGTTTCTTCAAGCCAGGTAATTCCTCAAACTACTACATAGGCATATGGTACAAAAGAGTCACCATACAAACAATAGTTTGGGTAGCGAATAGAGACAACCCTGTCTCTGATAAGAGCACTGCCAAGTTAACAATATCTGGTGGTAATTTAGTTCTCTTAGATGCGTCTTCAAATCAAGTTTGGTCAACAAACATAACTTCTCCCATGTCAGATTCTGTCGTAGTTGCTGTTCTTCTAGATTCTGGGAATCTTGTGTTAACAAATAGGCCTAATGGTGCTTCTGCTTCAGATTCTCTGTGGCAGAGTTTTGATCACCTAACTGACACGTTCCTTCCGGGTGGCAAAATCAAACTCGACAATAAAACTAAGAAACCTCAATACCTCACTTCATGGAAGAATAACCAAGATCCTGCAACGGGTCTTTTTTCTCTGGAACTAGACCCCGAAGGATCCAATGCTTATTTGATTAGTTGGAACAAGTCTGAAGAGTATTGGACAAGTGGTGCTTGGAATGGACACATTTTCAGCTTGGTTCCCGAGATGAGGTTGAATTATATCTTCAATTTCTCGTTTGTGTCGAACGAGAACGAGAGCTATTTCACTTATTCCCTGTATAACACTTCCATTATATCTCGGCTTGTGATGGATGTCTCGGGGCAGATCAAGCAACTCTCGTGGTTGGAAAATGCTCAGCAGTGGAACTTGTTTTGGTCACAGCCAAGACAACAGTGTGAGGTATATGCCTTTTGTGGTGCGTTTGGGAGCTGCACCGAAAACGTGATGCCATATTGTAATTGTTTGACAGGTTTTGAGCCAAAGTCACCGTTTGATTGGAATCTGGTTGATTACTCAGGCGGGTGTAAAAGGAAAACCAAGTTGCAATGCGAGAATTCCAATCCCTTTAACGGGGATAAGGACGGGTTCATAGCAATTCCCAACTTGGTATTGCCTAAACAAGAACAATCTGTGGGATCAGGGAATGAGGGGGTATGTGAATCAATTTGCTTGAACAACTGCTCCTGCACAGCTTATGCATTTGACAGTAACGGGTGTTCAATTTGGTTTGACAACCTTCTGAATGTGCAACAGTTATCTCAAGATGATAGTAGCGGACAAACTTTGTATGTCAAACTTGCAGCATCTGAGTTTCATGATGATAATAGCAGAATTGGGATGATTGTTAGTGTGGTTGTGGGCGTGATTGTTGGCATTGGTGTTCTCTTGGCCCTTCTTCTGTATGTCAAGATTAGGAAAAGAAAGAGAATGGTTAGAGCAGTGGAGGGTTCATTGGTGGCATTCAGGTACCGAGATTTGCAAAATGCAACGAAGAATTTCTCTGAGAAATTGGGAGAAGGAGGATTTGGTTCTGTTTTCAAAGGAACATTGGGTGACACCGGTGTGGTAGCAGTGAAGAAGTTGGAAAGTACTAGCCATGTAGAGAAACATTTCCAAACAGAAATTACTACAATAGGGAAAGTACAACATGTTAATCTCGTTAGGCTCCGTGGATTCTGCTCCGAAGGTAGCAAAAAGCTGCTAGTTTATGATTATATGCCAAATGGCTCCTTGGATTTCCATCTGTTCCAGAACAAGAACTCAAAGGTGTTGGACTGGAAAACAAGATACCAAATTGCGTTGGGAACAGCAAGAGGATTAGCTTACCTTCATGAGAAGTGCAGAGAGTGTATTATACACTGTGATGTAAAGCCTGGAAACATTCTCCTAGATGCTGATTTTTGTCCCAAGCTTGCAGACTTTGGCCTAGCTAAGCTGGTTGGAAGGGATTTGAGCAGGGTCGTCACAGCAGCTAGAGGAACAACAAACTATATTGCTCCAGAATGGATTTCTGGGGTGCCTATCACAGCAAAAGTTGATGTGTACAGCTATGGGATGATGCTTTTTGAGTTTGTATCAGGTAGGAGGAACTCTGAGCAGTGTGAAGGAGGCCCATTTGCCTTCTTTCCTACCTGGGCAGCAAACATAGTTGCCCACGGTGACAATGTTCTTAGCCTTTTGGATCCTAATTTGGAGGGAAACGTTGATGCTGAAGAAGTGACCCGAATGGTAACAGTCGCATTGTGGTGTGTCCAAGAAAATGAGACTCAGAGGCCAACCATGGGTCAGGTAATTCATATCCTTGATGGAATCTTGGACGTGAATTTACCTCCCATTCCAAGATCTCTTAAAGTGTTTGTTGATAACTAG 2532 0.4277 MLMLCLLNTMVPNSAFTILLGSVPTRVGPVPFIISLLLICLLHCSLQLLIGVRATPMYSMRNQRFCVYLLTLFFNLFTHNFLAALTTISTNQTLTGDQTLVSEAGVFELGFFKPGNSSNYYIGIWYKRVTIQTIVWVANRDNPVSDKSTAKLTISGGNLVLLDASSNQVWSTNITSPMSDSVVVAVLLDSGNLVLTNRPNGASASDSLWQSFDHLTDTFLPGGKIKLDNKTKKPQYLTSWKNNQDPATGLFSLELDPEGSNAYLISWNKSEEYWTSGAWNGHIFSLVPEMRLNYIFNFSFVSNENESYFTYSLYNTSIISRLVMDVSGQIKQLSWLENAQQWNLFWSQPRQQCEVYAFCGAFGSCTENVMPYCNCLTGFEPKSPFDWNLVDYSGGCKRKTKLQCENSNPFNGDKDGFIAIPNLVLPKQEQSVGSGNEGVCESICLNNCSCTAYAFDSNGCSIWFDNLLNVQQLSQDDSSGQTLYVKLAASEFHDDNSRIGMIVSVVVGVIVGIGVLLALLLYVKIRKRKRMVRAVEGSLVAFRYRDLQNATKNFSEKLGEGGFGSVFKGTLGDTGVVAVKKLESTSHVEKHFQTEITTIGKVQHVNLVRLRGFCSEGSKKLLVYDYMPNGSLDFHLFQNKNSKVLDWKTRYQIALGTARGLAYLHEKCRECIIHCDVKPGNILLDADFCPKLADFGLAKLVGRDLSRVVTAARGTTNYIAPEWISGVPITAKVDVYSYGMMLFEFVSGRRNSEQCEGGPFAFFPTWAANIVAHGDNVLSLLDPNLEGNVDAEEVTRMVTVALWCVQENETQRPTMGQVIHILDGILDVNLPPIPRSLKVFVDN* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3186 843 Pfam Protein kinase domain 555 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3186 843 SMART blect_4 91 215 IPR001480 -
Gso11g3186 843 Gene3D Phosphorylase Kinase; domain 1 520 626 - -
Gso11g3186 843 ProSitePatterns Protein kinases ATP-binding region signature. 558 581 IPR017441 GO:0005524
Gso11g3186 843 ProSiteProfiles PAN/Apple domain profile. 404 488 IPR003609 -
Gso11g3186 843 Gene3D Transferase(Phosphotransferase) domain 1 627 830 - -
Gso11g3186 843 ProSiteProfiles Bulb-type lectin domain profile. 85 208 IPR001480 -
Gso11g3186 843 Pfam D-mannose binding lectin 133 241 IPR001480 -
Gso11g3186 843 SUPERFAMILY Protein kinase-like (PK-like) 539 836 IPR011009 -
Gso11g3186 843 SMART ntp_6 412 487 IPR003609 -
Gso11g3186 843 ProSiteProfiles Protein kinase domain profile. 552 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3186 843 CDD B_lectin 91 214 IPR001480 -
Gso11g3186 843 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 63 843 - -
Gso11g3186 843 Pfam S-locus glycoprotein domain 274 383 IPR000858 GO:0048544
Gso11g3186 843 CDD PAN_AP_plant 400 488 - -
Gso11g3186 843 CDD STKc_IRAK 558 825 - -
Gso11g3186 843 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 63 843 - -
Gso11g3186 843 SMART serkin_6 552 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3186 843 Gene3D - 82 213 IPR036426 -
Gso11g3186 843 PIRSF SRK 58 843 IPR024171 GO:0004674
Gso11g3186 843 Pfam PAN-like domain 412 470 IPR003609 -
Gso11g3186 843 SUPERFAMILY alpha-D-mannose-specific plant lectins 119 280 IPR036426 -
Gso11g3186 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 672 684 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3186 Gso-Chr11 47663717 47666607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3186 497 829 Receptor kinase-like Gene Family AT1G56120 44.737 9.36e-75 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso11g3186 Pkinase 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3186 - - gmx:102667456 1647.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1681 12 40435164 40438196 Gso11g3186 11 47663717 47666607 GST