Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso11g3182 | ATGGATTTTGACCTTGAAAACCCTCTTGGAAACTTCCACGACCTTCCCTGCGACGCTGTCCCTTCCCTCTTCCTCATCGAATCCGACCACATCCCTCCTCCGAACTACTGTCAGAGTCTCAAAGCCAGCGACTTCGACATCTCTGTTAGAAGAGATGTTGTCTCTTTGATCTCGCAGTTGTCCTGCACCTTCGATCCGGTTCTCCCTTACTTAGCTATCAACTACTTGGATCGCTTCCTCGCTAACCAAGGAATATTGCAACCAAAGCCATGGGCAAACAAGCTTCTTGCAGTCTCTTGCTTTTCTCTAGCTGCCAAGATGTTGAAAACAGAGTACTCTGCCACTGATGTCCAGGTTCTTATGAATCATGGCGATGGAGGTGCCATTTTTGAGACACAAACAATTCAAAGAATGGAGGGCATTGTCTTGGGAGCTCTACAATGGCGAATGCGTTCGATCACCCCCTTCTCTTTCATTCCCTTCTTCGTGAATTTGTTCAGGCTGAAAGACCCAGCATTGAGGCAGGTTCTGAAGGATCGAGCATCAGAAATAATACTCAAGTCACAAAGAGAGATAAAGGTCTTGGAATTCAAGCCATCTACAGTTGCTGCGTCAGCCCTTCTGTATGCTTCACATGAGTTGTTTCCCTTTCAATATCCGTGCTTCTTAAGAGCAATATCCGATTGTTCATATATTAATAAGGAAACTGTAGTGCAATGTTATAATGTGATACAAGATATAGCCAGGGAGGAGTACGAATCGGTGTTGAATATAAACTCAACTTCAGACACACCGGTTAATGTGTTAGACGAACATTTTCTGAGCTTGGAAAGTGAAAAAACCAACGGAACCAACGTTGTTGTGACACAAGAGCAGGACTTCAAAAGAAGGAAAACCACCGATTATGGCAACAATCGCAGGGTCCCGTTTTCACATTTTCATCAATGCTGA | 951 | 0.4437 | MDFDLENPLGNFHDLPCDAVPSLFLIESDHIPPPNYCQSLKASDFDISVRRDVVSLISQLSCTFDPVLPYLAINYLDRFLANQGILQPKPWANKLLAVSCFSLAAKMLKTEYSATDVQVLMNHGDGGAIFETQTIQRMEGIVLGALQWRMRSITPFSFIPFFVNLFRLKDPALRQVLKDRASEIILKSQREIKVLEFKPSTVAASALLYASHELFPFQYPCFLRAISDCSYINKETVVQCYNVIQDIAREEYESVLNINSTSDTPVNVLDEHFLSLESEKTNGTNVVVTQEQDFKRRKTTDYGNNRRVPFSHFHQC* | 317 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso11g3182 | 316 | Gene3D | - | 33 | 151 | - | - | |
Gso11g3182 | 316 | SMART | cyclin_7 | 157 | 246 | IPR013763 | - | |
Gso11g3182 | 316 | SMART | cyclin_7 | 51 | 144 | IPR013763 | - | |
Gso11g3182 | 316 | SMART | Cyclin_C_2 | 153 | 268 | IPR004367 | - | |
Gso11g3182 | 316 | SUPERFAMILY | Cyclin-like | 135 | 249 | IPR036915 | - | |
Gso11g3182 | 316 | CDD | CYCLIN | 50 | 143 | IPR013763 | - | |
Gso11g3182 | 316 | PANTHER | CARBOXY-TERMINAL DOMAIN CYCLIN | 5 | 303 | - | - | |
Gso11g3182 | 316 | SUPERFAMILY | Cyclin-like | 13 | 150 | IPR036915 | - | |
Gso11g3182 | 316 | PANTHER | CYCLINS | 5 | 303 | IPR039361 | - | |
Gso11g3182 | 316 | CDD | CYCLIN | 153 | 244 | IPR013763 | - | |
Gso11g3182 | 316 | Pfam | Cyclin, C-terminal domain | 153 | 251 | IPR004367 | - | |
Gso11g3182 | 316 | Pfam | Cyclin, N-terminal domain | 28 | 150 | IPR006671 | - | |
Gso11g3182 | 316 | Gene3D | - | 23 | 242 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso11g3182 | Gso-Chr11 | 47598616 | 47601247 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso11g3182 | 1 | 300 | Core Cell Cycle Gene Families | AT4G03270 | 45.541 | 2.63e-81 | 247 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso11g3182 | K18812 | - | gmx:100799951 | 639.032 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso12g1686 | 12 | 40490228 | 40492842 | Gso11g3182 | 11 | 47598616 | 47601247 | GST | |
Gso11g3182 | 11 | 47598616 | 47601247 | Gso12g0868 | 12 | 9663463 | 9666207 | PCT | |
Gso11g3182 | 11 | 47598616 | 47601247 | Gso6g2463 | 6 | 46300764 | 46303297 | PCT | |
Gso12g0868 | 12 | 9663463 | 9666207 | Gso11g3182 | 11 | 47598616 | 47601247 | PCT | |
Gso6g2463 | 6 | 46300764 | 46303297 | Gso11g3182 | 11 | 47598616 | 47601247 | PCT |