Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3179 ATGGCTCAAGAGATGAATGAGCCTGCAATGAACATCATAGAGCAGTCTCAAGTTGCTCCTCCACAGGGCTCCCTTCCTTCAACAATTACCCCCCTCACTTTCCTCGACATTCCATGGCTCCTCAGCCGCCACGCCAGACGCATCTTCTTCTACGACTTTCCCTTTCCTACCACCCACTTCTTGCAAACAGCACTTCCTATTCTGAAACATTCTCTTTCCCACACACTCCAACACTTCTTCCCCTTTGCCTCCAATCTCATCCTCCCTCCACACCCCCACGTCCCTTACATCCGTTACCTTGAGGGTGACTCTCTCTCATTCACTGTCGCAGAGTCCAGTCCTGCAGACTTCACTCTTCTCACATCAGATTCCCCTCGAGACTCCTATGACTGGCAACCCCTTGCTCCGGTGCTACCCTCGCAACGTACTTCTCACGACGGCACGTGCGAGTTCCCCCTCATGGCCATTCAGGTAACGATGATACCAAACTCTGGATTCAGCATCTGTGTTATCTTCGACCACGTTGCAGGAGATGGGAGAACCCTTCATCATTTCATGAAGTTTTGGGCCTCCGTTTGCAAGGCCAAAGGAGATTTGGATTTCCCTTGCTCTATGCCTCTACCCTTATATGATAGGAACATAGTCAAAGACCCCAAAGGGCTCATGCACGTTTACATGCAAGACCTGAGAAATTCAGCGTTGCTAACTAAACAGTTCCGAGGGGTTTTACGTGGTGTTTACACTGACAAGGTACGTGCGACTTTCATATTCAGTAGCGAACAAGCTCAGAAATTAAAAAAATGGGTCTCTCTTAAATGTAACGGTTCGCGGACTTTACATATATCAACCTTTGTGGTGACATGTTCTTTGATATGGGTGTGTATGCTCAGATCAGAACAAAAGGAAAAGGAAGGTAATAATGAGCCAGGCAACATCGGATTTTCCGCAGACTGTCACAACCATCCTCAGTTTTCATTACCTTCAAACTACTTTGGGAATTGTTTGATCCCTCTCATTACAAGGCTAAAGAGGGGTGAGTTGGTGGAACAAAATGGGATTGTTGCAGCTGCAAATGCCATTGAAAAGAAGATTAGAGATTTCAAGAGTGATGCTTTGAGATGGGCCGAAACAACGATGTCAGATATTAGAGGCTTAAGGAAATCTGGTCAATCTCTTGTAGTGATTGTTGGCTCGCCAAAGCTGACCGCGTACAACACTGACTTTGGTTGGGGGAAGCCCGTGAAGTCTGAAGTGGTGAATCTTGATTCTGTGGGAACAGTTTCTCTCTCTGATTGTAGGGACCAAGAAGGTGGAATTCAGGTTGGAATGGTACTCGAGAGGATTCGAATGAACAATTTCACCAGCATCTTGGAAGAACACCTTAGTCATGTTGCCGTTCTTGACTAA 1407 0.4662 MAQEMNEPAMNIIEQSQVAPPQGSLPSTITPLTFLDIPWLLSRHARRIFFYDFPFPTTHFLQTALPILKHSLSHTLQHFFPFASNLILPPHPHVPYIRYLEGDSLSFTVAESSPADFTLLTSDSPRDSYDWQPLAPVLPSQRTSHDGTCEFPLMAIQVTMIPNSGFSICVIFDHVAGDGRTLHHFMKFWASVCKAKGDLDFPCSMPLPLYDRNIVKDPKGLMHVYMQDLRNSALLTKQFRGVLRGVYTDKVRATFIFSSEQAQKLKKWVSLKCNGSRTLHISTFVVTCSLIWVCMLRSEQKEKEGNNEPGNIGFSADCHNHPQFSLPSNYFGNCLIPLITRLKRGELVEQNGIVAAANAIEKKIRDFKSDALRWAETTMSDIRGLRKSGQSLVVIVGSPKLTAYNTDFGWGKPVKSEVVNLDSVGTVSLSDCRDQEGGIQVGMVLERIRMNNFTSILEEHLSHVAVLD* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3179 468 Gene3D - 247 464 IPR023213 -
Gso11g3179 468 Gene3D - 10 239 IPR023213 -
Gso11g3179 468 PANTHER - 10 464 - -
Gso11g3179 468 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 10 464 - -
Gso11g3179 468 Pfam Transferase family 15 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3179 Gso-Chr11 47568929 47570524 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3179 26 459 Monolignol Biosynthesis Gene Families AT5G48930 23.246 7.36e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3179 - - gmx:100814714 952.97