Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3177 ATGGTAGTTCTTAGAGAACACAAACTTGTAGAAAAATTTCAGGTTGGTCCAGCAGTGAGAACAATCACCACTCTTCCCCTCACATTCCTTGATTTGCCTTTAGCAGGTCCTATTTATGTGAGACGCCAATTCTTCTATCACTTCCCCCACTCCACACTCCATTTCTGTGAAACCATACTTCCTTGTCTCAAAACCTCTCTCTCTCAAACCCTTCAACACTTCTTCCCTCTCGCTGGAAACCTCCTCTGTCCACCACCACCCCACAAACCCTTCATTCGCTGCACCGGTGATGACTTTGTCACCTTAACCATCATTGAGTCCGAAGCAGATTTCAAAAATCTCTCATCCAACCGCCCCAAAAGCCTCAAAGATTTGGATCACTTGGTTCCCAAGTTAACATGCTCAAACACACACCATGACACGTTCATTTTCCCATTGGTAGCATTGCAAGCCACGGTTTTCCCCAACCATGGCCTTTGCATCGCGATCACGTATTGCCACGTGATGGATGATAGTTGTTGCAGCCATTTCATGAAATCTTGGTCCTCCATTTGTCGAAGTGGTGGAGTTGACTTTACTCTTGTGGAGAAGTCAACACCTTGCTTCGATAGGGAAGTGTTGAAGGACCCCAAAGGACTCGAAGCTATCTTCTTAAGAGATTACTTTGAAGAGAGGTCAACTTGGAAGGTTGGTAAAACTTCTGAGGTTTCCAATGGAAATAGTGAAGATTATGTCAAAGCAACGATTGTTTTTGGAAGAGAAGATGTCGAGGGGCTGAGAAGATGGGTGCTAAATCAGTGGAAGAGAAGTAAGGAATTCAACACACCACAATATATATCAAAATTTGTGGTGACGTGTGCTTTTGTGTGGGCTAGTTTGGTTAAAACAAGATGCAGAAATGATGAAGAAGAAGATGTCAAAGAGGAGTTCTTTCGTTTCGCTGCAGATTGCAGAGATCGCCTTGAGCATCCTGTGCCAAAAACTTACTTTGGAAACTGCTTAACTCTCTGTTATGCAATGCTTAAGAGAGAAGACCTCAAGGGAGAGAGTGGTTTTGTGAATGCGGTCAAGGTCATTGAAAGGGCAGTGGCTGATATGAAAAGTGAACTCTTCAAAGATGCAGAAAATTGGAGGGAATCTTTTACGAAGATGTTTGTGTTGGGAAGCACTTTGATAGTTACAGGGTCACCAAAATTCACTGTTTATGAGACTGATTTTGGATTTGGAAGGCCTACCAAAGTGGAAATGGCACATTCCTTTAAGGGTATGTCTCTGGCCGAAACTGGGGATAATGAAGGAGGACTTGAGATTGGCTTGGTGTGCACAAGTACAGAATATGAATATTTAATTTCCCTCATTGAACAAGGACTTCAAATTTCAAAGTCTTAA 1389 0.4284 MVVLREHKLVEKFQVGPAVRTITTLPLTFLDLPLAGPIYVRRQFFYHFPHSTLHFCETILPCLKTSLSQTLQHFFPLAGNLLCPPPPHKPFIRCTGDDFVTLTIIESEADFKNLSSNRPKSLKDLDHLVPKLTCSNTHHDTFIFPLVALQATVFPNHGLCIAITYCHVMDDSCCSHFMKSWSSICRSGGVDFTLVEKSTPCFDREVLKDPKGLEAIFLRDYFEERSTWKVGKTSEVSNGNSEDYVKATIVFGREDVEGLRRWVLNQWKRSKEFNTPQYISKFVVTCAFVWASLVKTRCRNDEEEDVKEEFFRFAADCRDRLEHPVPKTYFGNCLTLCYAMLKREDLKGESGFVNAVKVIERAVADMKSELFKDAENWRESFTKMFVLGSTLIVTGSPKFTVYETDFGFGRPTKVEMAHSFKGMSLAETGDNEGGLEIGLVCTSTEYEYLISLIEQGLQISKS* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3177 462 Gene3D - 7 234 IPR023213 -
Gso11g3177 462 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 462 - -
Gso11g3177 462 Gene3D - 241 460 IPR023213 -
Gso11g3177 462 PANTHER - 1 462 - -
Gso11g3177 462 Pfam Transferase family 23 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3177 Gso-Chr11 47559646 47561284 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3177 19 443 Monolignol Biosynthesis Gene Families AT5G48930 23.820 2.10e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3177 - - gmx:100813644 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1693 12 40563456 40565210 Gso11g3177 11 47559646 47561284 GST