Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3175 ATGGCTCAAGTGAAGATCTTAGAGCAAAGTGAAGTTGGTCCACCACCATGCTCACTTCCCTCAACCACCCTTCCCCTCACTTTCTTCGATATTCCATGGTTCTACTGCCACCCCATCCAACGCATCTTCTTCTATGACTTTCCCCACCCCACACACCACTTTCTCCAAACAGCACTTCCCATTCTCAAACACTCTCTTTCCCTAACCCTCCAACACTTCTTCCCCTTCTCCTCCAATCTCATCGTTCCTCCACAGCAACCCCATCTCTCTCACATACGCTACCTTGATGGAGACTCTCTCTCCTTCACCGTTGCAGAGTCCACCGCAGACTTCACCCTCCTCACATCAGATTCACCACAAGACGTTCAAAATTGGCACCCTCTTGTTCCCGCGTTTCCTACCCCACGTGTTGACCAAGATGGCGCACGTGTGTTCCCTCTTATGGCCATTCAGGTTACAATTTTCCCAAAGTCTGGCTTCACCATATGTCTCACCTTCAACCACCTTGCCAGCGACGGCAAGTCACTTCACCATTTCATCAAGTTCTGGGCCTCTCTTTGCAAAGCAAAAGGAAACACGGCTTCCCTTCAAACCTCTTTGTCTCTTCCTTCTCATGAGAGGGACAAAGTTAAAGATCCAAAGGGGCTTAAGCTCATTTACTTTCAAGAACTTGAACATCCTGAGTCCAGAAACATGGAGTTTGCGGGGCTCGTGAGAGAAGTCTCCTCTAACAAGGTTCGCTTCACAGTTGCATTGAGTCGTGAACAAGTTGAGAAATTTAAGAAATGGGTCTCTCTTAAATGCGCCAGCTACACTTCTGATGAGACATTGCACATATCAACCTTTGTGGTGACATGCTCCTTAATTTGGGTTTGCATGATTAGGTTAGAGGAGAGCAAAGGCAATTATGTTGCACAAGATTATGCTGAATTCTGCCACTTGGTGTTTCTTGCAGATTGTCGTGGTCGTCCTGAGTTTTCATTACCTTCAACGTACTTTGGGAATTGTCTAACCACTTGTTTTGTGGCTATGAAGAGGAGTGAGATAGTGGGAGAAAATGGGATCATTGGGGTGGCAAAGGCTATTGAAAGGCAAATTAGAGATTTGAAGAGTGATGCTTTGAGAAATGCTGAAAGGTTGATGTCATATTATAGAGAGTTAGGGAAACCAGGAAAATCTGTGTTGGTAGTTGCGGGGTCACCAAAATTGGGTGTGTATCATACTGATTTTGGATGGGGTAAGCCTAAGAAATCTGAAGCAGCGCATATTGAATCGTCAGGATCAATTTCTCTTTCTGATTGTAGAGATGAAAACGGAGGAATTGAGGTTGGATTGGCACTTGAAAGGATTCAGACGAATAATTTTTTCAACATCTTAGAAGAGCAACTCAATAATATTAATAAATTCTAA 1410 0.4447 MAQVKILEQSEVGPPPCSLPSTTLPLTFFDIPWFYCHPIQRIFFYDFPHPTHHFLQTALPILKHSLSLTLQHFFPFSSNLIVPPQQPHLSHIRYLDGDSLSFTVAESTADFTLLTSDSPQDVQNWHPLVPAFPTPRVDQDGARVFPLMAIQVTIFPKSGFTICLTFNHLASDGKSLHHFIKFWASLCKAKGNTASLQTSLSLPSHERDKVKDPKGLKLIYFQELEHPESRNMEFAGLVREVSSNKVRFTVALSREQVEKFKKWVSLKCASYTSDETLHISTFVVTCSLIWVCMIRLEESKGNYVAQDYAEFCHLVFLADCRGRPEFSLPSTYFGNCLTTCFVAMKRSEIVGENGIIGVAKAIERQIRDLKSDALRNAERLMSYYRELGKPGKSVLVVAGSPKLGVYHTDFGWGKPKKSEAAHIESSGSISLSDCRDENGGIEVGLALERIQTNNFFNILEEQLNNINKF* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3175 469 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 4 467 - -
Gso11g3175 469 PANTHER - 4 467 - -
Gso11g3175 469 Gene3D - 1 234 IPR023213 -
Gso11g3175 469 Gene3D - 242 466 IPR023213 -
Gso11g3175 469 Pfam Transferase family 15 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3175 Gso-Chr11 47541366 47543146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3175 61 461 Monolignol Biosynthesis Gene Families AT5G48930 22.196 6.22e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3175 - - gmx:100797294 946.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1694 12 40571240 40573234 Gso11g3175 11 47541366 47543146 GST