Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3149 ATGGGCTGTTGTGTTTCAACAAGCAGTCAGAGTACTTGTAGCAGCGGGAGCAATGGAGACACGATCGCTCCAACGTGTCTAGAGATCGGATTCTGTGGTCAAAAGAGTGCAAGGAGAACATTCTCTGATCATGTTGTCTCTCTGCACCAATTACCATCCTTACCAAACAGAATTTTCACCAATGGAAAGAGCAGGTCTTCTTGCATATTTACACAGCAGGGTCGGAAGGGTATTAATCAGGACGCCATGATTGTGTGGGAAGATTTCATGTCTGAAGATGTGACCTTTTGTGGTGTCTTTGATGGCCATGGTCCGCACGGTCACCTTGTTGCACGCAAAGTCAGGGAAGCCTTGCCGCTAAAACTGCTTTCATTTTTGCATTCTTCTGAATCAGGGCGAAATGGTTCAGGTAAAGCTTGTTTTAGGAGCAACATAAAGCCTGAAAGTGGAGAATCTGAGAAAGGTTTGTCTGCTGAAGATGAAGAAAATTCTATGTGGAGAGAAGCTTTCATGAAGGCATACAAGGCTATGGATAAAGTGTTGAGGTCTCATCCAAATTTGGACTGCTTCTGTAGTGGAAGCACAGCTGTCACTATAGTGAAGCAGGGTTCAAATTTGTTCATGGGAAATATTGGGGATTCCCGAGCAATCATGGGATCCAAGGACGGCAATGACTCCATGGTGGCAATTCAGTTGACCATTGATTTGAAGCCTGATTTGCCAAGGGAAGCAGAACGAATCAAACAGTGCAAGGGTAGGGTATTTGCATTACAAGATGAGCCAGAAGTTCATAGGGTATGGTTGCCTTTTGATGATGCACCAGGATTAGCAATGGCTAGAGCATTTGGAGATTTTTGCTTGAAGGAATATGGTGTGATTTCTATACCAGAATTTTCTCATCGGCTGCTAACAGACAAAGATCAGTTCATTGTTCTTGCCTCAGATGGGGTCTGGGATGTTTTGAGCAATGAAGAGGTGGTTAGGATAGTATCTTCAGCGCCAACTCGATCATCAGCAGCGAGGACTCTGGTGGATTCTGCAGCTCGTGAGTGGAAACTTAAATATCCTACTTCAAAAATGGATGACTGTGCAGTTGTGTGCCTATTTTTGGATGGAAAAATGGACTCAGAATCTGATTGTGATGAGCAATGCTCCTCTTCTGCAACCATCCAGAAGAACCATTGGGGTAATCCGGTTGAGTCAGATGACAGTCAAAAGCCTGAGCCATCTTTGCGAAGGAACTTTACTGTGAGATCCTCAGAAGAAAATGAAACCTATGGAGGAGGAGGAGTTGAAGAGGTATCTGTTGGTGTTGAAGATAGAACATCAGCGGCTGAAGATCAACACTGGTCTGGTCTGGAGGGTGTCACGCGAGTAAACTCACTGGTTCAACTTCCCAGATTTTCTGAGGAAAGGCCAAACTCTTGA 1428 0.4468 MGCCVSTSSQSTCSSGSNGDTIAPTCLEIGFCGQKSARRTFSDHVVSLHQLPSLPNRIFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARKVREALPLKLLSFLHSSESGRNGSGKACFRSNIKPESGESEKGLSAEDEENSMWREAFMKAYKAMDKVLRSHPNLDCFCSGSTAVTIVKQGSNLFMGNIGDSRAIMGSKDGNDSMVAIQLTIDLKPDLPREAERIKQCKGRVFALQDEPEVHRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDKDQFIVLASDGVWDVLSNEEVVRIVSSAPTRSSAARTLVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDCDEQCSSSATIQKNHWGNPVESDDSQKPEPSLRRNFTVRSSEENETYGGGGVEEVSVGVEDRTSAAEDQHWSGLEGVTRVNSLVQLPRFSEERPNS* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3149 475 Gene3D - 58 378 IPR036457 -
Gso11g3149 475 MobiDBLite consensus disorder prediction 391 452 - -
Gso11g3149 475 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 463 - -
Gso11g3149 475 SUPERFAMILY PP2C-like 59 372 IPR036457 -
Gso11g3149 475 CDD PP2Cc 65 370 IPR001932 -
Gso11g3149 475 MobiDBLite consensus disorder prediction 137 160 - -
Gso11g3149 475 MobiDBLite consensus disorder prediction 399 419 - -
Gso11g3149 475 PANTHER ALPHABET, ISOFORM E-RELATED 1 463 - -
Gso11g3149 475 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Gso11g3149 475 SMART PP2C_4 55 368 IPR001932 -
Gso11g3149 475 Pfam Protein phosphatase 2C 92 348 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3149 Gso-Chr11 47366227 47368897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3149 1 475 PP2C-type Phosphatase Gene Family AT1G03590 69.311 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3149 - - gmx:100788149 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1716 12 40745890 40751024 Gso11g3149 11 47366227 47368897 GST
Gso11g3149 11 47366227 47368897 Gso12g0899 12 10276400 10280180 PCT
Gso11g3149 11 47366227 47368897 Gso6g2431 6 45980563 45983963 PCT
Gso12g0899 12 10276400 10280180 Gso11g3149 11 47366227 47368897 PCT
Gso6g2431 6 45980563 45983963 Gso11g3149 11 47366227 47368897 PCT