Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3133 ATGGCGTCTTTACCTTCGGGTCGCAGCAACGGTGGTTCCAACGGCTTTGATTTGGGTTCCGGTGACATCCTTTATTCGTACGACGAGGAGGACTATACCAACCACGATTCTTCTAACGGCACTCACATCGATCCCACCAAGGATTCTCATGCATCAAGGATGGGAAGAACATCAATAGTTCCTGCTACTGCCTATAGTCCGTCTGAAGATTCTTTGAGCCAGGATGTGATTGCAACTGTCGAGAAGAGTATGAAAACACATGCTGACAACCTTATGCAGTTTCTTGAGGGACTTGGTACTAGGCTGTCACAGTTGGAATTATATTGTTACAATCTGGACAAATCAATTGGGGCAATGCGATCTGATTTAACTTGTGACCACGAGGAAACAGATTCAAAACTGAATTCTCTTGATAAACACCTTCAGGAAGTACACAGGTCTGTGCTAATTTTGAAAGACAGGCAAGAGCTAGCTGAGACTCGGAAAGAATTAGCCATGCTTAAACATGCTCAGAAAGAATCATCTTCCTCAAGCCATTCACAGTCAATTGAGGAGAGATCTTCACCTTCTTCCATGGATCCCAAAAGAATTGATAATGTATCTGACACACAGAACCAAGAGCTAGCTCTTGCCTTGCCTCATCAAGTTACCCCCCGGCAACAGCCTGTGGCATCCTTCTATCAAGTGCCTGCCCCAAATGTGAGACAAGCCACTCAACGACCTCATTATTACTTGATGCCCACCCCTTTGCCCAATCCACAAGCTGTGAACCAGCTTCCTCAGAATCAGTATTGGCCTTCTGATCTACTGTATCGAATTCCACAATCAACATCATCATCTCAGGCAACCCAATCCCCACCCGTGCAACAATTTTTGCAGTATCAGCAGCTACAGCACCAACAACAGCAATGGCTTCCACAGTTACCACCACAGCAGGTGCAAGTGCCACCTCCACAACCACCCTCAGCACAGTCTCAAGTGAGACCCCCCTCGGCAAATGTTTACACTCCATATGCTACCAGCCAAGCTACAAATCCTCTGCCCACAGAAACACTACCAAACAGTGTGCCGATGCAAATGCCTTATTCAGGAATTCCACCCCAAGGATCTAGCCATGGTGGTGGTAGCAGCAGCGGCGATGCCATGCCAAATGGATACAGCGGAGCTGGTAGAACAGTTCCACAGCAACCTCTGCTCCAGCTCATGAGGGGTTCTTTTTCAGCACAGCCAGCTGATGTGTATGGAACTAGTGGGGCCCAGTCCCACACCACGCGTCCTCCGGCTAGTTCCTACGATGTGTATGATGGCGAGAATGCCAGAGCACATTATCCACCCCAGCCTTCTCATTATGCTCAAGCTGGATATCCTCCAACTAGTGCTTCCCATCAGAACCATGCACCACATAATCTTATGGTCGGGAGTACTAGCCAGTCACAATTTATTCGTAGCCATCTCTACAATGATTTGATCGAGAAATTTGTGAGCATGGGATTTAGAGGCGATCATGTAGCAAACATTATCCAGAGGATGGAGGAAACTCAGCTGCCTATAGATTTTAACTCTGTAAATGACCGGTTGGATGTGCATAATCCCCAGAGGGGATGGTCAGGGTAA 1614 0.4746 MASLPSGRSNGGSNGFDLGSGDILYSYDEEDYTNHDSSNGTHIDPTKDSHASRMGRTSIVPATAYSPSEDSLSQDVIATVEKSMKTHADNLMQFLEGLGTRLSQLELYCYNLDKSIGAMRSDLTCDHEETDSKLNSLDKHLQEVHRSVLILKDRQELAETRKELAMLKHAQKESSSSSHSQSIEERSSPSSMDPKRIDNVSDTQNQELALALPHQVTPRQQPVASFYQVPAPNVRQATQRPHYYLMPTPLPNPQAVNQLPQNQYWPSDLLYRIPQSTSSSQATQSPPVQQFLQYQQLQHQQQQWLPQLPPQQVQVPPPQPPSAQSQVRPPSANVYTPYATSQATNPLPTETLPNSVPMQMPYSGIPPQGSSHGGGSSSGDAMPNGYSGAGRTVPQQPLLQLMRGSFSAQPADVYGTSGAQSHTTRPPASSYDVYDGENARAHYPPQPSHYAQAGYPPTSASHQNHAPHNLMVGSTSQSQFIRSHLYNDLIEKFVSMGFRGDHVANIIQRMEETQLPIDFNSVNDRLDVHNPQRGWSG* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3133 537 MobiDBLite consensus disorder prediction 452 467 - -
Gso11g3133 537 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 535 - -
Gso11g3133 537 MobiDBLite consensus disorder prediction 30 53 - -
Gso11g3133 537 Pfam UBA-like domain (DUF1421) 486 530 IPR010820 -
Gso11g3133 537 MobiDBLite consensus disorder prediction 167 198 - -
Gso11g3133 537 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 535 - -
Gso11g3133 537 MobiDBLite consensus disorder prediction 170 198 - -
Gso11g3133 537 MobiDBLite consensus disorder prediction 30 51 - -
Gso11g3133 537 MobiDBLite consensus disorder prediction 310 392 - -
Gso11g3133 537 MobiDBLite consensus disorder prediction 364 392 - -
Gso11g3133 537 MobiDBLite consensus disorder prediction 410 428 - -
Gso11g3133 537 MobiDBLite consensus disorder prediction 410 467 - -
Gso11g3133 537 MobiDBLite consensus disorder prediction 326 358 - -
Gso11g3133 537 MobiDBLite consensus disorder prediction 310 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3133 Gso-Chr11 47216749 47220534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3133 80 184 Trihelix Transcription Factor Family AT3G01560 32.381 1.55e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3133 - - gmx:100782293 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1730 12 40914791 40918726 Gso11g3133 11 47216749 47220534 GST