Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3131 ATGGAGCAGTCTCTGCTGAGAGGCGAAAGCAGTGACCAGAGTAACCGGTCGCGGGGAATATTCCGGCGCTCCGATGCTATCACCTACGGCTCCAACTACGAGAAAGCCGCTGCGTTCATCGATCTGGCTGAAGATGGTGTTGGTCTCCCTGAGGAAATTCTCGACTCACCAAACTTCCAAAATTACATAAGATTTTACTTTATATTCAATAAATGCAATCTAATCTGGTCTCTTAGTTATTTTGCTTTGATAGTCCTGAATTTCCTGGAGAAACCTCTATGGTGTAAAAAGCTTACCACAAATTCCTGCAACGATAGAGAGTATTTCTATTTGGGACAATTGCCATATCTAACTGATGCAGAATGTCTTATTTATGAGGGAATAACTCTTGTTTTGCTAATCATACATACATTCTTCCCATTGTTATACGAAGGATCCCACACATATTGGAAAAATACTATTAATCAATTGAAGGTTTTCTCTCTATTAGTGCTTGTTGCTGATGTGCTGCTCTATGCCCTTTTCTTGTCTCCACTGGCTTTTGATTTTCTACCTTTCAGAATTGCACCTTATATCAGAGTTGTTCTTTTTGTTCTGAATATTAGGGAGCTACGAGAAACCATCACTATCTTGGTTGGGATGCTTGACACATACTTAAATGTCTTGGCTTTGTGGCTTCTGTTTCTTCTTTTTGCTAGTTGGGTGGCATATGTGTTTTTTGAGGATACAATACAGGGGAAAACAGTATTCACTTCCTATGGTACTACGTTGTATCAGCTATTTCTTTTATTTACCACATCCAATAATCCAGATGTTTGGGTTCCTGCATACAAGTCGTCACGTTGGTATTGCCTGTTTTTCGTACTCTTTGTGCTGGTGGGAGTTTACTTTGTTACAAACTTGATCCTTGCTGTTGTTTATGACAGTTTCAAGAGTGAGCTTGTAAAACAAGTTTTTGAGAAGGATCGTTTGAGAAGAACTATGTTGGACAAAGCTTTTGATCTCTTGGATACGCATAAAGTTAGTAGTCTCAACAAAAATCAATGCATTAGGCTCTTTGAGGAGCTGAACAAGTACAGGACTTTGCCAAAAATCTCTCGGGAAGACTTTGAATTAATATTTGATGAGCTCGATGATAGTCATGATATAAAGATTAACAAGGATGAATTTGCAGATATTTGCAATGCCATTGCTTTAAAATTTCAGAAGGAAGATGTTATGTCTTACTTTGAGTATTTAGCATTCTACCATTCACCCAGCTCAAAGAGATTAAAAGAATTTGTGAGGAGTCCTATGTTTGGATACCTAGTGTCCTTTGTTCTCGTGATAAATCTGGTTGCTGTTATTATTGAGACAACGCTTGATATAGAAAACAATTCTGCTCAAAAGGCGTGGCAAGTGGTTGAGTTCGTTTTCGGGTGGATATATGTAATAGAAATGGTTTTAAAGATTTATGCATTTGGATTTGAGAACTATTGGCGAGATGGTCAAAATCGCTTTGATTTTATTGTCACAGTGATAATTGCCATTGGAGAAACTGTAACTTTTGCTGTAGCTGATGATGATCTTCCTTTCATCTCAAATGGAGAATGGATTCGTTACCTTCTTCTTGCAAGAATGTTGAGATTAATAAGGATCCTAATGTATGTCAAGCGATACCGAGCCTTTGTGGCAACTTTCTTGACTCTCATACCAAGTTTGATGCCATACCTAGGGATCATATTTTGTACCTTGTGTATTTATTGTTCAATTGGTGTACAGATTTTTGGTGGAATCGTTAATGCTGGAAACCCCGAATTGGAATTAACAGCTCTTGCTGAAAATGACTATTTGGTTTTCAATTTCAATGATTACCCAAATGGAATTGTGACACTTTTCAATTTTCTTGTCACGGCAACCTGGGACGAAGTTATGACGAGCTACAAGGAATTAACTGGGACTTCTTGGACTTATTTGTACTTCATTAGCTTCTACTTAATTACTGTTTTGCTGCTTTTGAACTTGATTATTGCTTTTGTCTTGGAGGCATTCTTTGCCGAAATGGAACTTGAGTCATCAGAAACTTGTGAAGGAAATGGCAAGGAAGTTGAAGGAGATAAATATCGAAAGCGATCTATTGGCACAAAAACACGAAGCCAGAGGGTTGATGCTCTTCTTCATCATATGCTGAGTGCTGAATTGTGTCAAAATGAGCCTTCCAGTACACAAACTTCATAA 2217 0.3802 MEQSLLRGESSDQSNRSRGIFRRSDAITYGSNYEKAAAFIDLAEDGVGLPEEILDSPNFQNYIRFYFIFNKCNLIWSLSYFALIVLNFLEKPLWCKKLTTNSCNDREYFYLGQLPYLTDAECLIYEGITLVLLIIHTFFPLLYEGSHTYWKNTINQLKVFSLLVLVADVLLYALFLSPLAFDFLPFRIAPYIRVVLFVLNIRELRETITILVGMLDTYLNVLALWLLFLLFASWVAYVFFEDTIQGKTVFTSYGTTLYQLFLLFTTSNNPDVWVPAYKSSRWYCLFFVLFVLVGVYFVTNLILAVVYDSFKSELVKQVFEKDRLRRTMLDKAFDLLDTHKVSSLNKNQCIRLFEELNKYRTLPKISREDFELIFDELDDSHDIKINKDEFADICNAIALKFQKEDVMSYFEYLAFYHSPSSKRLKEFVRSPMFGYLVSFVLVINLVAVIIETTLDIENNSAQKAWQVVEFVFGWIYVIEMVLKIYAFGFENYWRDGQNRFDFIVTVIIAIGETVTFAVADDDLPFISNGEWIRYLLLARMLRLIRILMYVKRYRAFVATFLTLIPSLMPYLGIIFCTLCIYCSIGVQIFGGIVNAGNPELELTALAENDYLVFNFNDYPNGIVTLFNFLVTATWDEVMTSYKELTGTSWTYLYFISFYLITVLLLLNLIIAFVLEAFFAEMELESSETCEGNGKEVEGDKYRKRSIGTKTRSQRVDALLHHMLSAELCQNEPSSTQTS* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3131 738 ProSiteProfiles EF-hand calcium-binding domain profile. 365 400 IPR002048 GO:0005509
Gso11g3131 738 Gene3D - 422 556 IPR027359 -
Gso11g3131 738 SUPERFAMILY EF-hand 313 397 IPR011992 -
Gso11g3131 738 Gene3D - 203 310 - -
Gso11g3131 738 Gene3D - 311 395 - -
Gso11g3131 738 Gene3D - 557 716 - -
Gso11g3131 738 SUPERFAMILY Voltage-gated potassium channels 430 677 - -
Gso11g3131 738 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 1 731 IPR044581 GO:0005245
Gso11g3131 738 Pfam Ion transport protein 431 678 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gso11g3131 738 Pfam Ion transport protein 131 312 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3131 Gso-Chr11 47186342 47205104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3131 1 737 Ion Channels AT4G03560 65.583 0.0 1016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3131 K16900 - gmx:100806160 1416.75