Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3126 ATGCAGCAACCAATTTCAATTTGGCAAAGTTTTTCTTCCATTTTCAGTCCCTTGCCAATGTCTCCACTAAAGCTCCTCATTTTTCTTCACACTGTAACCATTTTCAGTTCAGCTTCCACTACCGAATTTGTCTATAACACAAACTTCAACTCCACAAATATCATCCTATATGGAAATGCCTCTGTTCAGACCTCCATTCTTACTCTCACAAATCAAAGTTTCTTCTCCATAGGCCGTGCTTTTTACCCTCACAAAATACCTACCAAACTAGCCAACTCTTCCACTTTTCTCCCCTTTGCGACCTCCTTCATTTTCTCAATTGTCCCCATTAAAAACTTTATCACTGGTCATGGCTTTGTCTTCCTATTCACGCCATCAAGAGGTGTAAATGGCACGACCTCAGCGGAATATATCGGTCTTTTCAATCGCAGCAATGAAGGCAATCCTCAGAACCACGTTCTTGGAGTCGAGTTTGATCCGGTTAAAAATGAAGAAGAGTTCAACGATATAAGTGACAATCATGTTGGTATTGACATAAACTCGCTTTGTTCCTCAACTTCGCATGAGGCTGGTTATTGGGGTGGAAAAGGTGACAAAGAATTTAAGGTGTTGGATATAAAAAATGGAGAAAACTATCAGGTATGGATTGAATTTATGCACTCCCAGCTTAACATCACTATGGCTCGGGCAGGACAAAAGAAGCCTAGAGTGCCTCTTATCAGCAGTAGTGTTAACCTTTCAGGGGTTCTTATGGATGAAATATACGTTGGATTCACCGCAGCAACAGGTAGGATAATAGACAGTGCTAAGATTCTTGCTTGGAGTTTTAGTAATTCAAATTTTTCAATTGGTGATGCATTAGTGACAAAAAATTTGCCTTCATTTGTTCATCATAAAAGGTGGTTTTCTGGAGCACGAGCTTTAGCTGTAGGTGTCACCAGTATTGTGTGTGTGTTAATAATTGGTTGGGGTTATGTAGCGTTTTTCATTCTCCGCAGAAGAAAGTCACAAGAAGAAGTCGAAGATTGGGAATTGGAGTATTGGCCTCACAGGATTGGTTTCCATGAAATTGATGCAGCAACAAGGCGGTTTTCTGAAGAGAATGTGATTGCTGTCGGAGGGAACGGGAAGGTATATAAAGGGGTTTTGCATGGAGTAGAAGTTGCAGTCAAGAGAATCCCTCAAGAAAGGGAAGAAGGGATGAGAGAGTTTTTGGCAGAGGTTTCAAGCCTTGGCAGAATGACTCACAGAAATTTAGTAGGATTGAGAGGCTGGTGCAAAAAAGAAAGGGGAAACTTGATTCTAGTTTATGACTTCATGACCAATGGAAGTTTAGACAAAAGGATATTTGAGTGTGAAGAGAGATTGATGCTGACATGGGAAGAGAGGATTCAAGTTTTGAAAAATGTAGCCGCAGGGATTCTATACCTGCATGAGGGTTGGGAAGTTAAGGTCTTGCATAGGGACATTAAAGCAAACAATGTTCTACTTGATAAGGACATGAATGCAAGGCTGGGAGATTTCGGATTGGCTCGTATGCATGATCATCAGGGACAAGTGGTCAGCACAACAAGAGTAATAGGGACAGTAGGATACATTGCTCCTGAAGTGATTCGATCAGGAACGGCGTCAACTATGTCTGATGTGTTTGGTTTTGGAATATTGGTGTTGGAAGTAGTTTGTGGGAGAAGACCTATTGAAGAACATAAACCGGGGCTAATCGAATGGTTGATGTCCCTAATGATGCAAGGCCAATTGCACAGTGCTGTTGATGAAAGGTTGAAGGCTAAAGGCGGATACACCATAGAGGAAGCTGAGAGATTGCTTTATTTGGGTCTGTTATGTTCAAATTCAGACCCTGGTATCAGACCAACTATGAGGCAGGCTGTGAAAATTTTGGAGGTGGAAATTGACAGCACTGAGTCTGATGAAGAAAACATAGAGATGAGTTTTCTTGGAAAAATAAAATCAGCTGCTATGTGGTCTAGAGCTGAATGTGCTTTACCATACAGGGGTTACCCTTCTTTTGATGAAGTTAAGATGTTCAGTTTTAATTCTAGGACATCTGGAAGTGGCTCAAGTACCTTTCCAGGATCAGAATCAGAAATCACCAGAGAAAACAGATAG 2127 0.4118 MQQPISIWQSFSSIFSPLPMSPLKLLIFLHTVTIFSSASTTEFVYNTNFNSTNIILYGNASVQTSILTLTNQSFFSIGRAFYPHKIPTKLANSSTFLPFATSFIFSIVPIKNFITGHGFVFLFTPSRGVNGTTSAEYIGLFNRSNEGNPQNHVLGVEFDPVKNEEEFNDISDNHVGIDINSLCSSTSHEAGYWGGKGDKEFKVLDIKNGENYQVWIEFMHSQLNITMARAGQKKPRVPLISSSVNLSGVLMDEIYVGFTAATGRIIDSAKILAWSFSNSNFSIGDALVTKNLPSFVHHKRWFSGARALAVGVTSIVCVLIIGWGYVAFFILRRRKSQEEVEDWELEYWPHRIGFHEIDAATRRFSEENVIAVGGNGKVYKGVLHGVEVAVKRIPQEREEGMREFLAEVSSLGRMTHRNLVGLRGWCKKERGNLILVYDFMTNGSLDKRIFECEERLMLTWEERIQVLKNVAAGILYLHEGWEVKVLHRDIKANNVLLDKDMNARLGDFGLARMHDHQGQVVSTTRVIGTVGYIAPEVIRSGTASTMSDVFGFGILVLEVVCGRRPIEEHKPGLIEWLMSLMMQGQLHSAVDERLKAKGGYTIEEAERLLYLGLLCSNSDPGIRPTMRQAVKILEVEIDSTESDEENIEMSFLGKIKSAAMWSRAECALPYRGYPSFDEVKMFSFNSRTSGSGSSTFPGSESEITRENR* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3126 708 Gene3D Phosphorylase Kinase; domain 1 326 439 - -
Gso11g3126 708 SMART serkin_6 364 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3126 708 Gene3D - 39 284 - -
Gso11g3126 708 SUPERFAMILY Protein kinase-like (PK-like) 339 634 IPR011009 -
Gso11g3126 708 MobiDBLite consensus disorder prediction 687 702 - -
Gso11g3126 708 ProSiteProfiles Protein kinase domain profile. 364 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3126 708 Pfam Protein kinase domain 366 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3126 708 Pfam Legume lectin domain 41 280 IPR001220 GO:0030246
Gso11g3126 708 MobiDBLite consensus disorder prediction 687 708 - -
Gso11g3126 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672|GO:0006468
Gso11g3126 708 CDD STKc_IRAK 370 634 - -
Gso11g3126 708 SUPERFAMILY Concanavalin A-like lectins/glucanases 41 279 IPR013320 -
Gso11g3126 708 PANTHER - 20 695 - -
Gso11g3126 708 PANTHER LECTIN RECEPTOR KINASE 20 695 - -
Gso11g3126 708 Gene3D Transferase(Phosphotransferase) domain 1 440 656 - -
Gso11g3126 708 CDD lectin_legume_LecRK_Arcelin_ConA 41 279 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3126 Gso-Chr11 47152689 47155021 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3126 39 581 Receptor kinase-like Gene Family AT4G04960 57.169 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso11g3126 Pkinase 4.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3126 - - gmx:100804553 1391.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0942 12 11219509 11221898 Gso11g3126 11 47152689 47155021 PCT
Gso6g2397 6 45586674 45589110 Gso11g3126 11 47152689 47155021 PCT