Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3121 ATGGCAATGAGGTACTCCAATGACGGGTTTCTTGGCCTTTTTGCTTTGACCATCATATCCATCTTCATTCTCGGCTCTTCAACATCATCCTACACATTTCGCGTTGGTGGCAAAGACGGTTGGGTCATCAACCCTTCAGAAGACTACATTCACTGGCCACAGAGGAACAGGTTTCACGTCAACGACTCTCTCTATTTCAAGTACAAGAAAGGGTCTGATTCGGTTTTGGTGGTAAACAAGGATGATTACGATTCATGCAACTCCAACAACCCCATACAAAAGATGGACGAGGGTGATTCATTATTCACTTTAGACAAACCAGGACCTTTTTTCTTCATCAGTGGCAACCTTGAAAACTGCCAAAGTGGTCAAAAGCTAATCGTTGTCGTTTTGGCCAATACACACGAACATAGTCAGCCCCCTTCTCAGCCGGAAGCTGAGGCACCTATAGCAAATAGGCCGTCAGGCCCAAATTCTCCGGTGGCATCTCCGCCCAAACATTCGGGTTCTACGAGCGTACGAGGTTTAAGGGTTGCATTGGTGTCGCTTTCGGTGTTAGTGTTGAGGACTTGGGGTGGGTTTGCTCTTCAGCAAGTTGGCCTAGTTTGA 609 0.4696 MAMRYSNDGFLGLFALTIISIFILGSSTSSYTFRVGGKDGWVINPSEDYIHWPQRNRFHVNDSLYFKYKKGSDSVLVVNKDDYDSCNSNNPIQKMDEGDSLFTLDKPGPFFFISGNLENCQSGQKLIVVVLANTHEHSQPPSQPEAEAPIANRPSGPNSPVASPPKHSGSTSVRGLRVALVSLSVLVLRTWGGFALQQVGLV* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3121 202 Gene3D - 30 135 IPR008972 -
Gso11g3121 202 CDD OsENODL1_like 31 131 IPR041846 -
Gso11g3121 202 ProSiteProfiles Phytocyanin domain profile. 31 132 IPR003245 GO:0009055
Gso11g3121 202 SUPERFAMILY Cupredoxins 30 131 IPR008972 -
Gso11g3121 202 MobiDBLite consensus disorder prediction 137 171 - -
Gso11g3121 202 PANTHER BLUE COPPER PROTEIN 10 148 IPR039391 GO:0009055
Gso11g3121 202 PANTHER EARLY NODULIN-LIKE PROTEIN 2 10 148 - -
Gso11g3121 202 Pfam Plastocyanin-like domain 41 124 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3121 Gso-Chr11 47113375 47114784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3121 9 170 Phytocyanin Superfamily AT4G28365 45.181 1.70e-46 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3121 - - gmx:100802438 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g3121 11 47113375 47114784 Gso12g0951 12 11471155 11473020 PCT
Gso11g3121 11 47113375 47114784 Gso6g2389 6 45478383 45479821 PCT
Gso12g0951 12 11471155 11473020 Gso11g3121 11 47113375 47114784 PCT
Gso6g2389 6 45478383 45479821 Gso11g3121 11 47113375 47114784 PCT