Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3106 ATGCTTCAGCAGCTATTGCTGTTTCTGCTTCTCTCTCTACCCCCCACTCTCTCTCTAAACCAAGACGGCCTCTTCCTCCTCCAAGCCAAACTCCAACTCTCCGACCCCCAAAACGCCCTCTCCGACTGGAACCACCGCGACGCCACCCCATGCAACTGGACCGCCGTCACGTGCGACGCCGCAACCGGAGGCGTCGCCACTCTCGACTTCTCCAACCTCCAACTCTCCGGCCCCGTCCCCGCCACCACCCTCTGCCGCCTCCCCTCGCTCGCCTCCCTCAACTTTTCCTACAACAACCTCAACGCCACCCTCCCCGCCGCCGCGTTCTCCGCCTGCGCCGCCCTCCTCCACCTCGACCTTTCCCAGAACCTCCTCTCCGGCGCCATCCCCGCCACCCTCCCCGACTCCCTCGTCACCCTTGACCTCTCCTGCAACAACTTCTCCGGCGATATTCCGGCGAGCTTCGGCCAGCTCCGGCAACTCCAATCTCTCTCCCTTGTCAGTAACCTCCTCGCCGGAACCCTCCCCTCTTCCCTCGGCAATATTTCAACCCTCAAAATACTTCGCCTCGCTTACAACACCTTCGACGCCGGTCCCATTCCGAAAGAGTTCGGAAACCTCAAAAATCTCGAGGAGCTCTGGCTCGCAGGTTGCAGCCTTGTGGGCCCCATTCCACCCTCTTTAGGAAGGTTAAGTAATCTTTTGAACCTCGACCTGTCGCAGAACAACCTCGTCGGAGACATACCCGAACAACTCGTATCGGGTTTGCGCAACATTGTACAAATCGAACTCTACGAAAACTCTCTCTCCGGCGCGTTGCCACGCGCCGCGTTTACAAACCTCGCCAACTTAGAAAGATTCGATGCCTCCACGAACGAGTTGACTGGGACGATTCCAGAAGAGTTGTGTGGGTTGAAGAAACTCGGGTCGTTGAATTTGTACGAAAATAAGCTCGAGGGTTCTTTGCCGGAGACTATAGTGAAATCGTTGAACTTGTACGAGTTGAAACTGTTCAACAACTCGCTCACTGGGTCGTTGCCGAGTGGGTTGGGTAAAAACTCGAAGTTGCAGTCTCTCGACGTTTCTTATAACCGATTCTCCGGCGAGATTCCGGCGAGATTGTGCGACGGGGGAGCGTTGGAGGAGCTGATTCTGATATACAATTCGTTTTCCGGGAGGATCCCGGAGAGTCTCGAGGAATGCAAGAGTTTGAGGAGGGTTCGGCTTGGGAACAATAACTTTTCTGGCGTTGTGCCTGAAGGGTTATGGGGTTTGCCCCATTTGTATTTGTTGGAGCTTGTTTATAATTCTCTTTCTGGGTCGATTTCCAATTCGATTTCCGGGGCTTGGAACTTGTCAATGTTGTTAATTTCCGGGAATAAGTTTTCTGGGTCGATTCCTGAGGGGGTTGGGGAATTGGGTAATCTTGAAAAGTTTGTAGCTAATAATAATAGTCTTACTGGTCGGATTCCGAAAAGTGTGTTTAGGTTGAGTCAGTTGGATAGGCTTGTTCTCGGAGACAATCAGCTTTTCGGAGAAATTCCTGTTGGAGTTGGTGGTTGTAAGAAGCTCAATGAGCTTGATTTGGCGAATAATAGGTTAGGTGGGAGTATTCCTAAGGAGTTAGGGGACCTGCCTGTGCTTAATTATCTTGATCTTTCAGGGAATCAGTTCTCTGGTGAGATTCCAATTGAGCTGCAGAAGTTGAAGCCTGATTTGTTGAATTTGTCGAACAATCAGCTTTCTGGGGTGATTCCTCCTCTTTATGCTAATGAGAATTATAGAAAGAGTTTTCTTGGGAATCCTGGTTTATGCAAGGCTCTCTCTGGATTGTGTCCAAGCTTGGGTGGTGAGAGTGAGGGTAAGAGCAGAAAGTATGCGTGGATTTTCCGGTTCATATTTGTGCTTGCTGGGATTGTGTTAATTGTTGGGGTGGCTTGGTTTTACTTCAAATTCCGGGACTTCAAGAAGATGAAAAAGGGGTTTCACTTTTCAAAGTGGAGGTCGTTTCATAAGCTGGGTTTTAGTGAGTTTGAGATTATTAAATTGCTGAGTGAGGATAATGTAATAGGGAGTGGAGCATCTGGGAAGGTTTACAAAGTTGCGCTGAGTAATGGCGAGTTGGTGGCGGTTAAGAAATTGTGGAGAGCAACTAAGATGGGAAATGAATCTGTTGATTCTGAGAAGGACGGTTTTGAAGTTGAGGTTGAAACATTGGGAAAGATTCGGCACAAGAATATTGTGAGATTATGGTGTTGCTGCAACAGTAAAGACAGCAAGCTCTTGGTTTATGAGTACATGCCGAATGGAAGTCTTGCTGATTTGTTGCACAATAGCAAGAAAAGCTTGTTGGATTGGCCCACCAGATACAAAATTGCTATTGATGCTGCCGAGGGGCTCTCATATTTGCATCATGATTGTGTTCCCTCTATTGTTCATAGGGATGTCAAATCTAGCAATATCTTGCTAGATGATGAATTTGGAGCAAAAGTTGCCGATTTTGGAGTTGCCAAAATTTTTAAGGGAGCCAACCAAGGGGCGGAGTCCATGTCTGTGATTGCCGGATCTTATGGTTATATCGCACCAGAATATGCTTATACACTTCGGGTGAATGAAAAGAGTGACATTTATAGCTTTGGTGTGGTCATTTTGGAGTTGGTAACTGGGAAGCTCCCTCTTGACCCAGAGTATGGAGAAAATGATCTAGTAAAATGGGTTCAGTCCACATTAGATCAGAAAGGACTGGATGAGGTGATTGATCCCACTTTGGATATTCAATTTAGGGAAGAAATCAGTAAGGTACTCAGCGTGGGGCTTCATTGCACTAACTCTCTTCCTATAACCCGCCCTTCAATGCGTGGTGTGGTTAAAAAGCTGAAGGAAGTAACTGAACTTCCAAAATCCTTAAGTGGAAAACTCTCTTCTCCTTATTTTCAGGAAGAGGCTTCGGATATTGATCATGAGGGAAGCTTAGTTTGA 2979 0.48 MLQQLLLFLLLSLPPTLSLNQDGLFLLQAKLQLSDPQNALSDWNHRDATPCNWTAVTCDAATGGVATLDFSNLQLSGPVPATTLCRLPSLASLNFSYNNLNATLPAAAFSACAALLHLDLSQNLLSGAIPATLPDSLVTLDLSCNNFSGDIPASFGQLRQLQSLSLVSNLLAGTLPSSLGNISTLKILRLAYNTFDAGPIPKEFGNLKNLEELWLAGCSLVGPIPPSLGRLSNLLNLDLSQNNLVGDIPEQLVSGLRNIVQIELYENSLSGALPRAAFTNLANLERFDASTNELTGTIPEELCGLKKLGSLNLYENKLEGSLPETIVKSLNLYELKLFNNSLTGSLPSGLGKNSKLQSLDVSYNRFSGEIPARLCDGGALEELILIYNSFSGRIPESLEECKSLRRVRLGNNNFSGVVPEGLWGLPHLYLLELVYNSLSGSISNSISGAWNLSMLLISGNKFSGSIPEGVGELGNLEKFVANNNSLTGRIPKSVFRLSQLDRLVLGDNQLFGEIPVGVGGCKKLNELDLANNRLGGSIPKELGDLPVLNYLDLSGNQFSGEIPIELQKLKPDLLNLSNNQLSGVIPPLYANENYRKSFLGNPGLCKALSGLCPSLGGESEGKSRKYAWIFRFIFVLAGIVLIVGVAWFYFKFRDFKKMKKGFHFSKWRSFHKLGFSEFEIIKLLSEDNVIGSGASGKVYKVALSNGELVAVKKLWRATKMGNESVDSEKDGFEVEVETLGKIRHKNIVRLWCCCNSKDSKLLVYEYMPNGSLADLLHNSKKSLLDWPTRYKIAIDAAEGLSYLHHDCVPSIVHRDVKSSNILLDDEFGAKVADFGVAKIFKGANQGAESMSVIAGSYGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGKLPLDPEYGENDLVKWVQSTLDQKGLDEVIDPTLDIQFREEISKVLSVGLHCTNSLPITRPSMRGVVKKLKEVTELPKSLSGKLSSPYFQEEASDIDHEGSLV* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3106 992 Gene3D Phosphorylase Kinase; domain 1 666 766 - -
Gso11g3106 992 SMART LRR_typ_2 87 111 IPR003591 -
Gso11g3106 992 SMART LRR_typ_2 256 280 IPR003591 -
Gso11g3106 992 SMART LRR_typ_2 305 329 IPR003591 -
Gso11g3106 992 SMART LRR_typ_2 231 255 IPR003591 -
Gso11g3106 992 SMART LRR_typ_2 158 182 IPR003591 -
Gso11g3106 992 SMART LRR_typ_2 497 521 IPR003591 -
Gso11g3106 992 SMART LRR_typ_2 354 377 IPR003591 -
Gso11g3106 992 SMART LRR_typ_2 545 576 IPR003591 -
Gso11g3106 992 Pfam Protein kinase domain 686 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3106 992 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 965 - -
Gso11g3106 992 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 5 965 - -
Gso11g3106 992 Pfam Leucine Rich repeat 352 369 IPR001611 GO:0005515
Gso11g3106 992 SUPERFAMILY Protein kinase-like (PK-like) 682 959 IPR011009 -
Gso11g3106 992 SUPERFAMILY RNI-like 322 615 - -
Gso11g3106 992 SMART serkin_6 684 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3106 992 SUPERFAMILY L domain-like 35 371 - -
Gso11g3106 992 ProSitePatterns Protein kinases ATP-binding region signature. 690 713 IPR017441 GO:0005524
Gso11g3106 992 Gene3D Transferase(Phosphotransferase) domain 1 767 972 - -
Gso11g3106 992 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Gso11g3106 992 Gene3D Ribonuclease Inhibitor 135 199 IPR032675 -
Gso11g3106 992 Gene3D Ribonuclease Inhibitor 24 134 IPR032675 -
Gso11g3106 992 Gene3D Ribonuclease Inhibitor 200 254 IPR032675 -
Gso11g3106 992 Gene3D Ribonuclease Inhibitor 255 614 IPR032675 -
Gso11g3106 992 Pfam Leucine rich repeat N-terminal domain 20 59 IPR013210 -
Gso11g3106 992 ProSiteProfiles Protein kinase domain profile. 684 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3106 Gso-Chr11 46974571 46978239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3106 14 984 Receptor kinase-like Gene Family AT1G28440 59.536 0.0 1119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso11g3106 Pkinase 3.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3106 - - gmx:100778128 1686.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1753 12 41140403 41144095 Gso11g3106 11 46974571 46978239 GST