Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3098 ATGACGCAATTACCTCCAAAGATCCCAAACATGTCACCAAGTTGGCCAGATTTCTCTTCAGACCACCAGAAGATGCAATTGCCACCTCTTAAATCCGGTAGCAACAACAATTATCAGCACAACCAGAACCCTTCTTGGGTGGATGAGTTTCTTGACTTCTCCTCGGCCCGGCGGGGCGCTCACCGGAGGTCGGTGAGCGATTCCATCACCTACTTGGATTCACCAATGAAGTGTGGAGAGAATAACAACAACAATGAGAACGAGTTTGACAAGTTTGATGATGAACAATTCATGTCCATGTTCACGGATGAAGTAGTGCTCTCTGGGGTCCCCTTGCTTCCACCAACCATCTTGTCCTCCTCTAACCCTTCAAGCCCTTCTGATCAGAACTTCTTCAATGATGAGAAGGAGAAGAAGGAGGAGCACCACCACCACCAATTGAAAAATGAAGCAGATGAGGTTGAAAGCCAATGCAAACAGGAAATTATGCAGCTTCCAAATGACACCAATACTTGTTCTTCCAACGAGAGAATTACTGACCCCAAGAGAGTCAAAAGAATCTTGGCTAATAGACAATCTGCACAAAGATCGCGAGTGAGGAAGCTGCAATACATATCAGAGCTTGAGAGAAGTGTAACTTCATTACAGGCCGAAGTTTCAGTGCTGTCTCCAAGGGTTGCATTTTTAGATCATCAACGATTGCTTCTAAATGTCGACAACAGTGCTCTCAAGCAACGAATCGCTGCCCTTGCTCAAGACAAGATCTTTAAAGATGCTCATCAAGAGGCACTGAAGAGGGAGATAGAGAGACTAAGGCAAGTTTATCACCAACAAAGCCTCAAGAAGATGGAAAATGCTGCAGGATCACCATTACCATCACCAAAGCCTATATGTGATGCTCAAACAGAAAAGGAAGCAACACTTCTCAACGCTTGA 936 0.4498 MTQLPPKIPNMSPSWPDFSSDHQKMQLPPLKSGSNNNYQHNQNPSWVDEFLDFSSARRGAHRRSVSDSITYLDSPMKCGENNNNNENEFDKFDDEQFMSMFTDEVVLSGVPLLPPTILSSSNPSSPSDQNFFNDEKEKKEEHHHHQLKNEADEVESQCKQEIMQLPNDTNTCSSNERITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQSLKKMENAAGSPLPSPKPICDAQTEKEATLLNA* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3098 311 SUPERFAMILY Leucine zipper domain 182 236 IPR046347 GO:0003700|GO:0006355
Gso11g3098 311 Coils Coil 137 164 - -
Gso11g3098 311 MobiDBLite consensus disorder prediction 282 311 - -
Gso11g3098 311 CDD bZIP_plant_RF2 183 233 IPR044759 GO:0003700|GO:0006355
Gso11g3098 311 PANTHER BASIC LEUCINE ZIPPER 34 1 311 - -
Gso11g3098 311 MobiDBLite consensus disorder prediction 1 43 - -
Gso11g3098 311 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 180 232 IPR004827 GO:0003700|GO:0006355
Gso11g3098 311 Pfam bZIP transcription factor 182 226 IPR004827 GO:0003700|GO:0006355
Gso11g3098 311 Gene3D - 181 253 - -
Gso11g3098 311 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 185 200 IPR004827 GO:0003700|GO:0006355
Gso11g3098 311 MobiDBLite consensus disorder prediction 131 155 - -
Gso11g3098 311 MobiDBLite consensus disorder prediction 117 155 - -
Gso11g3098 311 Coils Coil 261 281 - -
Gso11g3098 311 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 311 - -
Gso11g3098 311 SMART brlzneu 178 242 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3098 Gso-Chr11 46890660 46894729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3098 1 259 bZIP Transcription Factor Family AT3G58120 58.076 1.62e-95 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso11g3098 bZIP_2 3.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3098 - - gmx:100815433 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1763 12 41229490 41233816 Gso11g3098 11 46890660 46894729 GST