Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso11g3097 | ATGGGTTACTTGGACGATGATCATGATCATGACACATTCCACGACCACAACGACTTCAACAGAAGGATACTCATCATGGCTATAGTTTCCTTATCAGTGGTATTGGTTCTTGTCTTTACACTTCACCTCTACGCAAGGTTTTTCCTCCGCCGCAGAGCCGCCATATACCAACTCAGCCTCAACGTGGCACACGCACACGCCGAGCCAGACAACAACACAGGGCTCGACCCTGTCCTCATCACCACCCTCCCCACCTTCCCCTTCAAACAACCAAACAACGATTCTGTGGAGTGTGCCGTGTGCTTGAGCGTTCTAGAAGATGGAGAACAAGTGAGGCTTCTTCCCAATTGCAAACACAGCTTCCACGTCGGTTGCATCGACACGTGGCTTGCTTCGCACTCCACGTGTCCCATTTGCCGGACCAAGGCCGAACCGGTCCGGCTCGAACCGCAGCCGCGTGAGGGCCCCACCGGCTCGGTTCTTCTCGATGTTGTTGCACCCACGGCTCCGCTATTGTTTGAAAACGTGGAAGGAACCTTGGATGGTGCTAATAATAATGGGTCACCTAAGGTTAGTGGTTCGAATTCGAGGTTGAGTTCGTTCAGAAGGATTCTTAGTAGGGACAGATCGATGAGGAGGATTCAACCTTCTAGCCATGATGATGTTGAACATGATTTAGAGAGCCAGTGA | 690 | 0.5145 | MGYLDDDHDHDTFHDHNDFNRRILIMAIVSLSVVLVLVFTLHLYARFFLRRRAAIYQLSLNVAHAHAEPDNNTGLDPVLITTLPTFPFKQPNNDSVECAVCLSVLEDGEQVRLLPNCKHSFHVGCIDTWLASHSTCPICRTKAEPVRLEPQPREGPTGSVLLDVVAPTAPLLFENVEGTLDGANNNGSPKVSGSNSRLSSFRRILSRDRSMRRIQPSSHDDVEHDLESQ* | 230 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso11g3097 | 229 | Pfam | Ring finger domain | 97 | 140 | IPR001841 | - | |
Gso11g3097 | 229 | PANTHER | RING FINGER DOMAIN-CONTAINING | 1 | 229 | - | - | |
Gso11g3097 | 229 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 61 | 146 | IPR013083 | - | |
Gso11g3097 | 229 | SMART | ring_2 | 98 | 139 | IPR001841 | - | |
Gso11g3097 | 229 | ProSiteProfiles | Zinc finger RING-type profile. | 98 | 140 | IPR001841 | - | |
Gso11g3097 | 229 | PANTHER | RING-H2 FINGER PROTEIN ATL40-LIKE | 1 | 229 | - | - | |
Gso11g3097 | 229 | MobiDBLite | consensus disorder prediction | 209 | 229 | - | - | |
Gso11g3097 | 229 | CDD | RING-H2_PA-TM-RING | 97 | 140 | - | - | |
Gso11g3097 | 229 | SUPERFAMILY | RING/U-box | 92 | 146 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso11g3097 | Gso-Chr11 | 46876682 | 46877893 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso11g3097 | 6 | 227 | C3H Transcription Factor Family | AT2G42360 | 45.643 | 1.83e-54 | 172 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso11g3097 | K19038 | - | gmx:100796057 | 405.601 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso12g1765 | 12 | 41248996 | 41250138 | Gso11g3097 | 11 | 46876682 | 46877893 | GST |