Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3045 ATGGTGGGAACTCCAATTAACGGAAGAACAAGGCTATCTTTTGGTGTTGTGAATGGTGGCCATGATCTTGGCCCCAGTAGTGCTCCACCAAGCAATGCTGGCTCAGATTATGGCATTATAGAGTTCACAAGAGAGGATGTGGAGGCCTTACTGAATGAAAAGGCCAAAAGAAAAGACAGATTTAATTATAAGGAAAGATGTGAAAACATGATGGATTATATAAAAAGGCTGAAGGTTTGCATCAGGTGGTTCCAAGACCTTGAGATTAGCTACTCACTAGAGCAAGAAAAATTGAAGAGTTCATTGGAATTGGCCCAGCAAAAATGCACGGAAATAGAGTTGCTGCTCAAAATCAAGGAAGAAGAGTTAAACTCAATTATTGTGGAAATGAGAAGGAATTGCACTTCTTTACAAGAGAAATTAGTGAAGGAAGAAACAGAAAAAACAGCGGCTGCGGAATCTCTTGTTAAGGAGAGAGAGGCTAGGCTTAACTTTGAGAGGTCACAGAGTACACTACAGGAGGATCTTGGACGAGCACAACGAGAGCTCCAAAGTGCAAATCAGAAGATATTGTCACTCAATGACATGTATAAGCGGTTACAGGATTACATAACAAGCTTGCAGCAGTACAATGGGAAACTCCATTCAGAGCTTTCTACAGTTGAAAATGAACTTAAGAGTGTAGAGAAAGAGAAAGCTACTGTAGTGGAGACCCTTACCATGTTAAAGGGTCAGCTTACTTTGTCTATGGCTTCTCAAGAAGAGGCCACAAAACAGAAGGATGCATTGGCTAGTGAAGTTACATCTCTCCGAGTAGAGTTGCAACAAGTGAGGGATGATCGAGACCGCCAATTATCTCAAGCGCAAACTTTAACATCTGAATTAGAGAAGTCTAAAGATTTTACAGAAAAGTCCTGCTCTGAACTGAACAAATTGACTTTAAGAACAAATGAACTGGAGACAAAATGTGCTTTGCAAGATGAACGGATAAAGGTACTACAAGAGAAGCTAACTACTGCTGAGGAGAAACTTCAGGTTTGTGACATATCTGCAAGTGAGACAAGAATAGAATTTGAAGGGCAACAAAAACTTGTACATGAGATGCAAAGACGTTTGGCAGATGCGGAATATAAAGTTATAGAAGGGGAGAAGCTGAGGAAAGAATTACACAATACCATTTTGGAACTGAAAGGGAACATCCGCGTGTTCTGTAGAGTGCGGCCTTTGTTACCTGATGAAGGTTCTAGCACGGAAGGAAATATTATATCTTATCCCACATCGATGGAAGCTTCTGGACGGGGCATTGAATTGACACAAAATGGCCAAAAACATTCTTTCACATATGATAAAGTTTTTGCACCTGATACATCACAAGAAGAAGTTTTTATTGAAATTTCACAGCTTGTGCAAAGTGCTCTTGATGGTTATAAGGTTTGCATTTTTGCCTATGGTCAGACAGGGTCAGGGAAAACTTACACGATGATGGGCAGGCCTGGACATCCAGGAGAAAAGGGCTTGATCCCTCGTTCACTAGAACAAATATTTCAAACAAAACAGTCTCAGCAACCCCAAGGCTGGAAATATGAAATGCAGGTGTCTATGTTGGAAATATACAATGAAACCATTCGTGATCTGTTAGCTACAAATAAGTCATCAGCAGATGGAACACCAACACGTGTGGAAAATGGTACTCCTGGGAAGCAATACACGATCAAACATGATGCCAATGGAAATACACACGTTTCTGATCTCACAGTAGTGGATGTTCAGAGTGTAAAAGAGGTTGCATTTCTTTTAAATCAAGCTGCAAGTAGCAGATCTGTGGGAAAAACTCAGATGAATGAACAATCTTCTAGAAGTCATTTTGTATTCACTCTTCGAATATATGGTGTAAATGAGAGCACTGACCAACAAGTACAAGGTATTCTAAATCTCATTGATCTTGCTGGGAGTGAACGTCTTTCAAGGAGTGGATCAACCGGGGACCGATTGAAAGAGACTCAAGCAATAAATAAAAGTCTGTCATCATTAAGTGATGTAATATTTGCCTTGGCCAAGAAGGAGGATCATATCCCATTCAGGAACTCAAAGCTCACATACCTACTTCAGCCTTGTCTAGGTGGGGACTCAAAGACATTAATGTTTGTGAACATCTCTCCCGACCAAGCTTCATCTGGAGAGTCATTATGCTCACTCCGGTTTGCATCAAGAGTCAATGCTTGTGAAATTGGGACACCTCGCCGTCACACAAATGGACGCCCTATAGAATCTCGCTTGACCTATTTCTAA 2289 0.4085 MVGTPINGRTRLSFGVVNGGHDLGPSSAPPSNAGSDYGIIEFTREDVEALLNEKAKRKDRFNYKERCENMMDYIKRLKVCIRWFQDLEISYSLEQEKLKSSLELAQQKCTEIELLLKIKEEELNSIIVEMRRNCTSLQEKLVKEETEKTAAAESLVKEREARLNFERSQSTLQEDLGRAQRELQSANQKILSLNDMYKRLQDYITSLQQYNGKLHSELSTVENELKSVEKEKATVVETLTMLKGQLTLSMASQEEATKQKDALASEVTSLRVELQQVRDDRDRQLSQAQTLTSELEKSKDFTEKSCSELNKLTLRTNELETKCALQDERIKVLQEKLTTAEEKLQVCDISASETRIEFEGQQKLVHEMQRRLADAEYKVIEGEKLRKELHNTILELKGNIRVFCRVRPLLPDEGSSTEGNIISYPTSMEASGRGIELTQNGQKHSFTYDKVFAPDTSQEEVFIEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPGEKGLIPRSLEQIFQTKQSQQPQGWKYEMQVSMLEIYNETIRDLLATNKSSADGTPTRVENGTPGKQYTIKHDANGNTHVSDLTVVDVQSVKEVAFLLNQAASSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGILNLIDLAGSERLSRSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHIPFRNSKLTYLLQPCLGGDSKTLMFVNISPDQASSGESLCSLRFASRVNACEIGTPRRHTNGRPIESRLTYF* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3045 762 Coils Coil 169 196 - -
Gso11g3045 762 Coils Coil 102 147 - -
Gso11g3045 762 Gene3D - 156 307 - -
Gso11g3045 762 PRINTS Kinesin heavy chain signature 475 496 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g3045 762 PRINTS Kinesin heavy chain signature 611 628 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g3045 762 PRINTS Kinesin heavy chain signature 642 660 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g3045 762 PRINTS Kinesin heavy chain signature 691 712 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g3045 762 SMART kinesin_4 397 749 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g3045 762 Gene3D Kinesin motor domain 345 743 IPR036961 -
Gso11g3045 762 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 359 739 IPR027417 -
Gso11g3045 762 Coils Coil 40 60 - -
Gso11g3045 762 Coils Coil 253 294 - -
Gso11g3045 762 SUPERFAMILY Tropomyosin 248 401 - -
Gso11g3045 762 ProSiteProfiles Kinesin motor domain profile. 399 741 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g3045 762 Pfam Kinesin motor domain 405 739 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g3045 762 Coils Coil 316 343 - -
Gso11g3045 762 Coils Coil 211 238 - -
Gso11g3045 762 CDD KISc_C_terminal 397 743 - -
Gso11g3045 762 PANTHER KINESIN-LIKE PROTEIN 7 761 - -
Gso11g3045 762 PANTHER KINESIN-LIKE PROTEIN KLP-3 7 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3045 Gso-Chr11 46313685 46320007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3045 312 753 Calmodulin-binding Proteins AT5G65930 35.730 1.82e-78 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3045 K10405 - gmx:100801196 1437.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1818 12 41876678 41883166 Gso11g3045 11 46313685 46320007 GST
Gso15g0542 15 4831917 4838477 Gso11g3045 11 46313685 46320007 GST
Gso7g1585 7 37625946 37642631 Gso11g3045 11 46313685 46320007 PCT
Gso8g0524 8 4844952 4852545 Gso11g3045 11 46313685 46320007 PCT
Gso11g3045 11 46313685 46320007 Gso12g1132 12 16059679 16065934 PCT
Gso11g3045 11 46313685 46320007 Gso6g2212 6 42769113 42775251 PCT
Gso11g3045 11 46313685 46320007 Gso7g1585 7 37625946 37642631 PCT
Gso11g3045 11 46313685 46320007 Gso8g0524 8 4844952 4852545 PCT
Gso12g1132 12 16059679 16065934 Gso11g3045 11 46313685 46320007 PCT
Gso6g2212 6 42769113 42775251 Gso11g3045 11 46313685 46320007 PCT