Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3043 ATGGCAATTCAACAATATATGGGTATCATTACGGTTATATTTTGCATCATTTTGGCTTTTAATATTATGGCAGTAGTCAGCATTGAAGAGAAGAAAACTCAAGAAGAATTCATTGGCCAACTATTTGATCCAGCATCTGGACTATTGACTGAAGACACGGCAGAGGTACTATGGATCACTTGCAGGGAAGATTTTATTCTTTTAAAGAAAGAAGTTGGAGATCTTGACTTATGCCTCCCAAAGGAATCATACAGAAACACCAATGAAATTAGTTCAGCAATTGGCTCAATAGCTAGAGAAAACATCAAAAAATTGATTAGTACATGTTATCCTCAGTTAAAGGAAAATGTTCTTCACTGTTTGAGAAAAAACAATTTTCCATTCAATGTTCTCCAGCAAGAGGGTGACTCCAAGATTTGGCATGCCACTTACATGGGATCACTTTCTTCTAGAAGATATTTGGGTCGAGTTTTTCCCCAGCACGTATCAGAAATATCAATCAAGGAAGATGAATCACCAAAAAGGAATAAGCCTAAGGATCAAGACTCCGATAAAAAAGACAAAAAAAAGAAGTCCAAGTCTTCTGACTCTAAGGACGAAAACAAAAACACATCTATGGCTATAATTACAATAGTGGCAATTTTAGTTGCTGCATTGTTCTTTTTATGTTGTTGTCGTCGATGTTGTGGGAGTGGTCGAGTTAGCCAAAATGACGAGAGGCCCCTTCTTAGCATGAGCATAAATGACTACTCAGTTGGTTCTTCTTCCAATAACAATCCATATAAAAACTCAATAAAAGAGGAGAAAATTGGGTTTCAATCATCAAGTAATACAATATTGGTTGATGACAAGAATAACTCAATGAAGCAAATTCAATTAGCAGGAGTTGCTGCTAGTGCTGCAACAAGACCACCATTTGAGTTAAATCCTCCTCCGGGGAGAGTAGCAAATAATGGAGTGCTTCCTTTGAAACCTCCTCCTGGAAGGCCTGATCTTCTTCCTCCTGATCCGTGTTCAATTAAGCCTTCTGATAGTTCCATTGTTCCTTCTCCTCCACCTCCCCCACCTCCTCCACCTGGACCTCCTCCACCTCCTCCACCTCCTAGCGGTGGCCCTCGACCACCGCCTCCTCCTAGCAATGGCCCTAGAGCTCCTCCACCACCACCACTTAGAGGCAAGCCTGGTCCTAGACCTCCACCACCTCCTAGAGTTGGTGGAGGTCCTCCAAGAGCACCACCCCCATTTGGTTCAAAGGTTGCTAAGACTCAGGAAGAAGTTGGAGCTAATTCTGAAGGTGATCAAGCTAATGCTACTAATAAAGCTAAGCTAAAGCCTTTTTTCTGGGATAAGGTTCAAGCTAACTCAGATCAAACAATGGTCTGGAATCAACTCAAAGCAGGATCATTCCAGTTTAATGAAGAAATGATGGAGACGCTTTTTTGCTATAATACTACGCCTGTGGACAAAAGCAAAGGGCAACAAAAGAAAGAGACTTCCTCCCCGGCAGCTTCACCTCAATATATACAGATCATTGACTCAAAGAAATCACAAAATTTATCTATTCTATTAAAAGCATTGAATGTGACAATAGAAGAAGTCTGTGATGCACTTCTTGAAGGAAATGAGCTCCCCACAGAATTCCTCCAATCTTTACTGAAGATGGCACCAACATCAGAGGAAGAACTTAAGCTTAGACTTTTCAATGGTAATTTAGCCCAACTTGGTCCTGCGGATAGGTTCCTAAAAGCCCTAGTTGACATTCCATTTGCTTTTAAACGAATGGAAGCACTACTTTACATGGGTACTCTTCAAGAAGAACTCACTAGTACTCGAGAATCTTTTGCAATTTTAGAGGTTGCCTGCAAAACGCTAAGAAGCAGTAGATTGTTCCTCAAGCTTCTTGAAGCCGTTCTCAAAACCGGCAACCGTATGAACGATGGAACGTTCCGTGGTGGCGCACAAGCATTCAAACTCGATACACTTCTGAAACTATCTGATGTAAAAGGAGTAGATGGCAAGACCACTCTCCTACACTTCGTTGTTCTAGAGATAATGCGAACCGAGGGCATAAGAGCTGCACGAATGGCAAAAGAGAGCCATAGTTTCTCTAGCATAAAAACAGATGATCTTCTTGAAGACATTTCTTTTGAATCAGAAGACCAATACCGCGAACTTGGCCTTCAAGTGGTTTCACGTTTGAGCAGTGAACTCGAGAATGTGAAGAAAGCAGCAGCGTTAGATGCTGATGCATTGATAGGAACAACCTCTAGACTAGGCCATGGACTCATAAAAACAAGAGATTTTGTAAACAAAGACCTAAGTGACATAGATGATGACAAAGGCTTTCATGAGACAGTGAAGAGTTTTGTGGAGAAAGCTGAGGTTGATGTCACGAGTTTGCTAGAAGAAGAGAAGCAAATCATGGCCCTAGTGAAGAACACTGGTGATTACTTTCATGGGGACTCAGGGAAGGATGAAGGGTTGAGATTGTTTATGATAGTACGTGATTTCTTGGTAATGTTGGATAAGGAGTGCAAGGAGATTAAGAATGCACCAAAGAAGCCGGTAGTGAAAAATGTGAAGAGAGAAGCTTCTAATCATTCTAGAAAGTCGTCTTCCTCAGAAAATCATCCTCTTCCTTCTGATATCCGTCAGAGAATGTTTACAGCAGTAGTGGCAAATACAAGGATGGATGACTTTAGTTCTGATGATGAGAGTCCTTAA 2724 0.4119 MAIQQYMGIITVIFCIILAFNIMAVVSIEEKKTQEEFIGQLFDPASGLLTEDTAEVLWITCREDFILLKKEVGDLDLCLPKESYRNTNEISSAIGSIARENIKKLISTCYPQLKENVLHCLRKNNFPFNVLQQEGDSKIWHATYMGSLSSRRYLGRVFPQHVSEISIKEDESPKRNKPKDQDSDKKDKKKKSKSSDSKDENKNTSMAIITIVAILVAALFFLCCCRRCCGSGRVSQNDERPLLSMSINDYSVGSSSNNNPYKNSIKEEKIGFQSSSNTILVDDKNNSMKQIQLAGVAASAATRPPFELNPPPGRVANNGVLPLKPPPGRPDLLPPDPCSIKPSDSSIVPSPPPPPPPPPGPPPPPPPPSGGPRPPPPPSNGPRAPPPPPLRGKPGPRPPPPPRVGGGPPRAPPPFGSKVAKTQEEVGANSEGDQANATNKAKLKPFFWDKVQANSDQTMVWNQLKAGSFQFNEEMMETLFCYNTTPVDKSKGQQKKETSSPAASPQYIQIIDSKKSQNLSILLKALNVTIEEVCDALLEGNELPTEFLQSLLKMAPTSEEELKLRLFNGNLAQLGPADRFLKALVDIPFAFKRMEALLYMGTLQEELTSTRESFAILEVACKTLRSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGVDGKTTLLHFVVLEIMRTEGIRAARMAKESHSFSSIKTDDLLEDISFESEDQYRELGLQVVSRLSSELENVKKAAALDADALIGTTSRLGHGLIKTRDFVNKDLSDIDDDKGFHETVKSFVEKAEVDVTSLLEEEKQIMALVKNTGDYFHGDSGKDEGLRLFMIVRDFLVMLDKECKEIKNAPKKPVVKNVKREASNHSRKSSSSENHPLPSDIRQRMFTAVVANTRMDDFSSDDESP* 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3043 907 MobiDBLite consensus disorder prediction 423 437 - -
Gso11g3043 907 MobiDBLite consensus disorder prediction 856 870 - -
Gso11g3043 907 PANTHER FORMIN-RELATED 192 346 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso11g3043 907 PANTHER FORMIN-RELATED 1 160 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso11g3043 907 PANTHER FORMIN-RELATED 349 905 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso11g3043 907 ProSiteProfiles Formin homology-2 (FH2) domain profile. 433 867 IPR015425 -
Gso11g3043 907 MobiDBLite consensus disorder prediction 323 337 - -
Gso11g3043 907 SUPERFAMILY Formin homology 2 domain (FH2 domain) 446 853 - -
Gso11g3043 907 SMART it6_source 433 856 IPR015425 -
Gso11g3043 907 MobiDBLite consensus disorder prediction 165 200 - -
Gso11g3043 907 MobiDBLite consensus disorder prediction 302 438 - -
Gso11g3043 907 PANTHER FORMIN-LIKE PROTEIN 349 905 - -
Gso11g3043 907 PANTHER FORMIN-LIKE PROTEIN 1 160 - -
Gso11g3043 907 PANTHER FORMIN-LIKE PROTEIN 192 346 - -
Gso11g3043 907 MobiDBLite consensus disorder prediction 856 886 - -
Gso11g3043 907 Pfam Formin Homology 2 Domain 437 841 IPR015425 -
Gso11g3043 907 Gene3D Formin, FH2 domain 439 877 IPR042201 -
Gso11g3043 907 MobiDBLite consensus disorder prediction 346 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3043 Gso-Chr11 46297342 46302530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3043 440 892 FH2 protein (formin) Gene Family AT5G54650 65.198 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3043 - - gmx:100782988 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1820 12 41894993 41900156 Gso11g3043 11 46297342 46302530 GST
Gso11g3043 11 46297342 46302530 Gso12g1135 12 16230120 16237706 PCT
Gso11g3043 11 46297342 46302530 Gso6g2211 6 42714229 42721573 PCT
Gso12g1135 12 16230120 16237706 Gso11g3043 11 46297342 46302530 PCT
Gso6g2211 6 42714229 42721573 Gso11g3043 11 46297342 46302530 PCT