Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3023 ATGAAAAAGTGCAGAGCATGTGAAACAGGTAACAACTTGATGGTAGAGAACAATGAAGAAAACGTGAAAGAAGACCTTGAACTTCCTTTAGTTGACCTTGCTGCAATTGTCAAAGCTACTGATGGCTTCTCAATTAACAATAAGCTGGGAGAAGGTGGATTTGGGGCTGTATACATGGGTACCCTAGACGATGGACATGAAATTGCTGTGAAGAGGCTCTCACAAAGTTCTGGACAAGGCTTTAATGAATTTAAGAATGAAGTCATATTGATTGCCAAACTTCAGAATCGGAACCTAGTCAAGTTTCTTGGTCGTTGCATTGAAGGAGAGGAGAAGATGGTTATATATGAATACATGCCTAACAAAAGCCTAGAATTCTTTATCTTTGATCATGCAAAAGGGAACGTTTTAGATTGGCCTAAGCGCTTCAACATTATTTGTGGAATTGCACGAGGACTTCTGTATCTTCATCAAGATTCTAGGTTGAGGATAATACAGAGACCTTAA 507 0.3905 MKKCRACETGNNLMVENNEENVKEDLELPLVDLAAIVKATDGFSINNKLGEGGFGAVYMGTLDDGHEIAVKRLSQSSGQGFNEFKNEVILIAKLQNRNLVKFLGRCIEGEEKMVIYEYMPNKSLEFFIFDHAKGNVLDWPKRFNIICGIARGLLYLHQDSRLRIIQRP* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3023 168 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 167 - -
Gso11g3023 168 ProSiteProfiles Protein kinase domain profile. 43 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3023 168 Gene3D Phosphorylase Kinase; domain 1 5 118 - -
Gso11g3023 168 SMART tyrkin_6 43 167 IPR020635 GO:0004713|GO:0006468
Gso11g3023 168 ProSitePatterns Protein kinases ATP-binding region signature. 49 71 IPR017441 GO:0005524
Gso11g3023 168 Pfam Protein tyrosine and serine/threonine kinase 44 159 IPR001245 GO:0004672|GO:0006468
Gso11g3023 168 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 22 167 - -
Gso11g3023 168 Gene3D Transferase(Phosphotransferase) domain 1 119 167 - -
Gso11g3023 168 SUPERFAMILY Protein kinase-like (PK-like) 28 164 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3023 Gso-Chr11 46100374 46105527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3023 5 167 Receptor kinase-like Gene Family AT4G23230 56.442 1.09e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso11g3023 PK_Tyr_Ser-Thr 1.5e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3023 - - mnt:21395541 236.884