Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3018 ATGTTCAAATTGAGTAAAAAAGAAACATTTTCTCAGTTCCAGGCTCTAAAGAAATCTCTTTCCTACAGATTTTGGGTGACCACCAAGAGGAACGCGTTGGTTTCTCTTTGGGAAAGTCAAGTCAGTGACTGGCACACTCTCTATACTCAACCATCATCCCCGTGTGAATATTATGGGAAGTGTGGAGCAAATAGCGTTTGCAATGCGAACAATCCTAGGTGCACATGCTTGGATGGATTTGTTGCACACATCAATCGGTCCATGGGTTGTGTTCGAACCATTCGCTTGACTTGTAACAAAGACGGGTTCAGGAGGTACACAGGCATGGTTCTTCCCGATACATCCTCATCTTGGTATGATAGAAACTTGAATCTACAGCAATGTAAGGATCTGTGTTTGCAAAACTGTTCATGTACGGCATATGCAAATTTGGATATAAGTGGTGGAGGAAGTGGCTGCTTGCTTTGGTATCATGATCTCATTGACTTGAGGCATTACCCACAAGCTCAAGGGGGGCAGGACATTTATATACGATACTCTGATTCAGAGCTAGATCACAGTCACAAAAATGGTTTAAGCAAGAGGAAGATTGAAGCCATCATCAGTTGCTCTACCACATTCGTCATGTGCATGATACTAGGATTGGCCATATGGTTATGGAAAAGGAAGGTCGAAATGGAAGGGATGAAAAAAATATTTCATCAAAGTCGTCACAACTCTAAACTAAGGAAGGAAGAGCCGGACTTACCAGCATTTGACTTGCCTTTCATTGCTAAAGCCACTGATAACTTCTCAGACGCTAACAAACTAGGAGAAGGTGGTTTTGGACCAGTGTACAAGGGTACTCTAATAGATGGACAAGACATAGTTGTGAAACGGCTTTCAAACACCTCCGGTCAGGGTATGGAAGAATTTAAAAATGAAGTTGCACTGATTGCCAGACTTCAACACCGTAATCTTGTGAAGCTTCATGGTTATTGCATTCAAGAGGAAGAAAAAATGTTGATATATGAATACATGCCCAACAAGAGCTTGGACTACTTTATTTTTGATGAAATTAGAAGCAAAATATTGGATTGGAGTAAGCGATTCCATATTATTGGTGGCATTGCTCGAGGGCTAGTGTATCTTCATCGAGACTCTAGATTGAGTATTATTCACCGAGATTTGAAAGCCAGCAATATTCTACTGGATGAAAATATGAATTCTAAAATATCAGACTTTGGCCTTGCTCGCACATTATGGGGAGATCAAGTAGATGCTAACACTAACAAGATTGCCTGGACATATGGATACATGCCTACCGAATATGCTGTACATGGGCATTTCTCAATGAAATCCGATGTGTTTAGTTTTGGTGTCATGGTGTTAGAAATAGTAAGTGGGAAGAAAAACAGAGATTTTTCTGATCCAGAACACTTTCTAAATCTTCTTGGACATGCATGGAGACTCTGGACTGAAGGAAGGCCAACAGACCTGATGGATGCATTTTTATGTGAAAGATGCACTTCTTCTGAAGTTATTCGATGTATACATGTAGGTTTGCTATGTGTGCAACAAAGACCAGAAGATAGGCCTGATATGTCAGCTGTGGTTCTGATGTTGAATGGTGATAAATTGTTGCCACAGCCAAAGGTGCCTGGTTTTTACCACGGAAGTGACAAAGCATATTTGTCTGGAAAGTTCAAATCATTCTCTTACAATGATGTTTCCCTAACAGTTTTAGGGGCAAGAATCCACACATGCACACTGTTTATCTTGGCCCTCAATGCAAATCTGGTGCATCGTTGTGGGTGTTGCTGGTTCGAGATTGTGAATTTCGATGATGACGGAAGGAGCAAGCAATGGAAGGATGTTGTACCTACAAGAGTCGAAACCGTGTGCGGTGTGCATTGGGTGAACAGTGAACACCATGTTGCCGGGTTTGGTGTAATTATCGGAAATAATCCATCCGAAAGAAAAAAAAAAATGCAAAACTTGAGAACACAATGGTTTTGGTTTTTTCTGTTCTGTTGTATATCAAGAACCTCCACTTCACTAGATAGTATAGCTCCAAATCAATCCATCAGTGATGGAGAGACATTAATTTCACATGAAAAAACCTTTGAACTTGGATTCTTCAGCCCTGGAAGCTCAAAGAGCAGATACTTGGGTATTTGGTACTACAACATAAATCCTCGAACAATGGTTTGGGTTGCCAACAGAGAAGCACCACTCAACACTACATCAGGAGTTCTAAAACTCAGTGATCAAGGTCTTGTTCTTGTTAATGGAACAAATAACATTGTGTGGTCTTCCAACATGTCAACCACAGCAGAGACAGAGAACACAATTGCGCAGCTATTAGACTCAGGAAACCTTGTTGTGAAAGATGGGAATAGTGAGCATGAGCACTATCTTTGGCAGAGTTTTGATCATCCATGTGATACATTATTGCCTGGAATGAAGCTTGGTTGGAATCTAGAGAAGGGAGAAGAATTGTTTCTATCATCATGGAAAAGTGCTGATGATCCTAGTCATGGGGAGTACTCTTTCAAAATAGACCCCAGAGGATGTCCACAAGCAGTTCTGTGGAAAGGAACCAATTTAAGCAATAGATTTGGGCCATGGAATGGCCTTTACTTTTCAGGGTCTTTAATTGATTCACAAAGTCCAGGTGTCAAAGTTGATTTCGTTTTGAATAAAAAAGAGATATATTATCAGTTCCAGGTTCTAAATAAATCTCTTTCCTACAGATTTTGGGTGACCCCTAATAGGAATGCCTTGGTTTCCCTTTGGGAAAGTCAAATCAGCGATTGGCTGATTCTCTATTCTCAACCATCATTCCCATGTGAATATTATGGGAGGTGTGGTGCAAATAGCATTTGCAATGCGGGCAATCCTAGATGTACATGCTTGGATGGATTTTTTAGACACATGAATTCGTCCAAGGATTGCGTTCGAACCATTCGTTTGACTTGCAACAAAGACAGGTTTAGGAAGTATACAGGAATGGTTCTTCCTGACACATCTTCATCTTGGTATAATAAAAACATGGTTTTAGAGGAATGTGCGGAAATGTGTCTGCAAAACTGTTCATGTACGGCATATGCAAATTTGGATATAAGTGGTGGAGGAAGTGGCTGCTTGCTTTGGTATCATGATCTCATTGACTTGAGGCATTACCCACAAGCTCAAGGGGGGCAAGACATTTATATACGATACTCTGATTCAGAGCTAGATCACAGTCAGAAAAATGGATTGAGCAAGAGCAAGATTGCATCCATCGTGACTGGCTCAACCATGTTCGTCGTGTCTATGATACTCGGATTGGTCATATGGTTATGGAAAAGGAAAGTCGAAATGGAAGAGATGAAAAAACAACTTTACCAAAGCCATCACAACTATAATCTAAGGAAGGAAGAGCCGGATTTACCAGCATTTGACTTGCCTGTCATTGCTAAAGCCACTGATAACTTCTCAGACACTAACAAACTGGGAGAAGGTGGTTTTGGACCAGTGTACAAGGGTACTCTAATAGGTGGGCAAGACATAGCTGTGAAACGGCTTTCAAACAACTCTGGCCAGGGTTTGAAAGAATTTAAAAATGAAGTTGCATTGATTGCAAAACTTCAACACCGTAATCTTGTGAAGCTTCATGGTTATTGCATTCAAGAGGAAGAGAAAATGTTGATATATGAATACATGCCCAACATGAGCTTGGACTACTTTATTTTTGATGAAATTAGGACCAAATTATTGGATTGGAGTAAGCGTTTCCATATTATTGGTGGCATTGCTCGAGGGCTAGTGTATCTTCATGAAGACTCTAGATTGAGGGTTATTCACCGAGATTTGAAAACCAGCAATATTCTACTAGATGAAAATATGAATCCCAAAATTTCTGACTTTGGCCTTGCTCGCACATTATGGGGAGATCAAGTAGATGCTAACACCAACAAGATTGCTGGGACATATGGATACATGCCTCCTGAATATGCTGTACATGGGCATTTCTCAATGAAATCCGATGTCTTTAGTTTTGGTGTCATGGTGTTAGAAATAGTAAGTGGGAAGAAAAACAGAGATTTTTCTGACCCAAATCACTGTCTGAATCTTCTTGGACATGCATGGAGACTATGGACTGAAGGAAGGCCTACAAACTTGATGGATGCATTTTTAGGTGAAAGATGCACTTCATCTGAAGTTATTCGATGTATACATGTAGGCTTGTTATGTGTGCAACAGAGACCAAATGATAGGCCTGACATGTCAGCTGTGGTTCTAATGCTGAATGGTGAAAAATCGTTGCCACAGCCAAAGGCTCCTGGCTTTTACAATGGAAGGGACAAAGCAGATTTGTTTGGACCATTTTCTAACAATGATGCTTCCCTAACGGTTTTAGAGGCAAGATAA 4395 0.4055 MFKLSKKETFSQFQALKKSLSYRFWVTTKRNALVSLWESQVSDWHTLYTQPSSPCEYYGKCGANSVCNANNPRCTCLDGFVAHINRSMGCVRTIRLTCNKDGFRRYTGMVLPDTSSSWYDRNLNLQQCKDLCLQNCSCTAYANLDISGGGSGCLLWYHDLIDLRHYPQAQGGQDIYIRYSDSELDHSHKNGLSKRKIEAIISCSTTFVMCMILGLAIWLWKRKVEMEGMKKIFHQSRHNSKLRKEEPDLPAFDLPFIAKATDNFSDANKLGEGGFGPVYKGTLIDGQDIVVKRLSNTSGQGMEEFKNEVALIARLQHRNLVKLHGYCIQEEEKMLIYEYMPNKSLDYFIFDEIRSKILDWSKRFHIIGGIARGLVYLHRDSRLSIIHRDLKASNILLDENMNSKISDFGLARTLWGDQVDANTNKIAWTYGYMPTEYAVHGHFSMKSDVFSFGVMVLEIVSGKKNRDFSDPEHFLNLLGHAWRLWTEGRPTDLMDAFLCERCTSSEVIRCIHVGLLCVQQRPEDRPDMSAVVLMLNGDKLLPQPKVPGFYHGSDKAYLSGKFKSFSYNDVSLTVLGARIHTCTLFILALNANLVHRCGCCWFEIVNFDDDGRSKQWKDVVPTRVETVCGVHWVNSEHHVAGFGVIIGNNPSERKKKMQNLRTQWFWFFLFCCISRTSTSLDSIAPNQSISDGETLISHEKTFELGFFSPGSSKSRYLGIWYYNINPRTMVWVANREAPLNTTSGVLKLSDQGLVLVNGTNNIVWSSNMSTTAETENTIAQLLDSGNLVVKDGNSEHEHYLWQSFDHPCDTLLPGMKLGWNLEKGEELFLSSWKSADDPSHGEYSFKIDPRGCPQAVLWKGTNLSNRFGPWNGLYFSGSLIDSQSPGVKVDFVLNKKEIYYQFQVLNKSLSYRFWVTPNRNALVSLWESQISDWLILYSQPSFPCEYYGRCGANSICNAGNPRCTCLDGFFRHMNSSKDCVRTIRLTCNKDRFRKYTGMVLPDTSSSWYNKNMVLEECAEMCLQNCSCTAYANLDISGGGSGCLLWYHDLIDLRHYPQAQGGQDIYIRYSDSELDHSQKNGLSKSKIASIVTGSTMFVVSMILGLVIWLWKRKVEMEEMKKQLYQSHHNYNLRKEEPDLPAFDLPVIAKATDNFSDTNKLGEGGFGPVYKGTLIGGQDIAVKRLSNNSGQGLKEFKNEVALIAKLQHRNLVKLHGYCIQEEEKMLIYEYMPNMSLDYFIFDEIRTKLLDWSKRFHIIGGIARGLVYLHEDSRLRVIHRDLKTSNILLDENMNPKISDFGLARTLWGDQVDANTNKIAGTYGYMPPEYAVHGHFSMKSDVFSFGVMVLEIVSGKKNRDFSDPNHCLNLLGHAWRLWTEGRPTNLMDAFLGERCTSSEVIRCIHVGLLCVQQRPNDRPDMSAVVLMLNGEKSLPQPKAPGFYNGRDKADLFGPFSNNDASLTVLEAR* 1465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3018 1464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 385 397 IPR008271 GO:0004672|GO:0006468
Gso11g3018 1464 ProSiteProfiles Protein kinase domain profile. 264 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3018 1464 CDD PAN_AP_plant 96 178 - -
Gso11g3018 1464 ProSiteProfiles Bulb-type lectin domain profile. 680 802 IPR001480 -
Gso11g3018 1464 Pfam PAN-like domain 987 1052 IPR003609 -
Gso11g3018 1464 Pfam PAN-like domain 98 163 IPR003609 -
Gso11g3018 1464 SMART serkin_6 264 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3018 1464 SMART serkin_6 1153 1422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3018 1464 Pfam Protein tyrosine and serine/threonine kinase 1156 1421 IPR001245 GO:0004672|GO:0006468
Gso11g3018 1464 Pfam Protein tyrosine and serine/threonine kinase 268 532 IPR001245 GO:0004672|GO:0006468
Gso11g3018 1464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1274 1286 IPR008271 GO:0004672|GO:0006468
Gso11g3018 1464 ProSiteProfiles Protein kinase domain profile. 1153 1430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3018 1464 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 576 - -
Gso11g3018 1464 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 675 1461 - -
Gso11g3018 1464 Gene3D Transferase(Phosphotransferase) domain 1 1229 1434 - -
Gso11g3018 1464 Gene3D Transferase(Phosphotransferase) domain 1 340 541 - -
Gso11g3018 1464 SMART blect_4 686 807 IPR001480 -
Gso11g3018 1464 CDD B_lectin 686 807 IPR001480 -
Gso11g3018 1464 ProSiteProfiles PAN/Apple domain profile. 98 180 IPR003609 -
Gso11g3018 1464 Pfam S-locus glycoprotein domain 5 82 IPR000858 GO:0048544
Gso11g3018 1464 Pfam S-locus glycoprotein domain 866 971 IPR000858 GO:0048544
Gso11g3018 1464 SMART ntp_6 987 1068 IPR003609 -
Gso11g3018 1464 SMART ntp_6 98 179 IPR003609 -
Gso11g3018 1464 Gene3D - 675 804 IPR036426 -
Gso11g3018 1464 ProSiteProfiles PAN/Apple domain profile. 987 1069 IPR003609 -
Gso11g3018 1464 Gene3D Hepatocyte Growth Factor 984 1068 - -
Gso11g3018 1464 Gene3D Hepatocyte Growth Factor 95 179 - -
Gso11g3018 1464 SUPERFAMILY Protein kinase-like (PK-like) 1135 1424 IPR011009 -
Gso11g3018 1464 SUPERFAMILY Protein kinase-like (PK-like) 246 535 IPR011009 -
Gso11g3018 1464 CDD STKc_IRAK 1159 1426 - -
Gso11g3018 1464 SUPERFAMILY alpha-D-mannose-specific plant lectins 729 838 IPR036426 -
Gso11g3018 1464 CDD STKc_IRAK 270 537 - -
Gso11g3018 1464 CDD PAN_AP_plant 985 1067 - -
Gso11g3018 1464 Gene3D Phosphorylase Kinase; domain 1 225 339 - -
Gso11g3018 1464 Gene3D Phosphorylase Kinase; domain 1 1113 1228 - -
Gso11g3018 1464 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 675 1461 - -
Gso11g3018 1464 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 2 576 - -
Gso11g3018 1464 Pfam D-mannose binding lectin 728 833 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3018 Gso-Chr11 46058858 46069247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3018 252 549 Receptor kinase-like Gene Family AT4G11530 59.000 7.60e-116 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso11g3018 PK_Tyr_Ser-Thr 5.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3018 - - gsj:114373347 3054.23