Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3010 ATGGCAGCAACATTGATGGCAGCAACAAGTTCTGGCACTCTTAAAGCAACTCCTTTCCTAGGCCAAGGCAAGGGTGCCAATGCCAATGCTCTTAGGGATGTTGTTTCCATGGGAACTGGGAAGTACACCATGGGCAATGATTTGTGGTATGGACCAGACAGAGTGAAATACTTGGGACCCTTTTCAGCTCAGACCCCTTCATACTTGAAAGGAGAATTCCCAGGGGATTATGGATGGGACACTGCTGGCTTATCTGCTGACCCGGAAGCATTTGCCAAGAACAGGGCTCTTGAGGTTATCCATGGGAGATGGGCCATGCTTGGAGCACTAGGATGCATCACCCCAGAGGTGCTAGAGAAGTGGTTGAGAGTGGACTTCAAGGAGCCAGTGTGGTTCAAAGCTGGAGCCCAAATATTCTCAGAAGGTGGGCTTGACTATTTGGGGAACCCAAACCTTGTCCATGCACAAAGCATCCTGGCAGTGCTGGGCTTCCAAGTTATCCTAATGGGCCTTGTTGAAGGGTACCGCATCAATGGGCTTGATGGGGTGGGAGAGGGCAATGACCTCTACCCTGGGGGCCAGTACTTTGACCCACTGGGCCTTGCTGATGACCCAGTCACTTTTGCTGAGCTCAAAGTCAAGGAGATCAAGAATGGAAGGCTGGCCATGTTCTCTATGTTTGGATTCTTTGTTCAAGCCATTGTCACTGGAAAAGGCCCATTGGAGAACCTCTTGGACCACCTTGACAACCCTGTGGCTAACAATGCTTGGGTCTATGCCACTAAGTTTGCCCCAGGATCTTAA 804 0.505 MAATLMAATSSGTLKATPFLGQGKGANANALRDVVSMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGYRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3010 267 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 8 267 - -
Gso11g3010 267 SUPERFAMILY Chlorophyll a-b binding protein 48 264 - -
Gso11g3010 267 Gene3D Chlorophyll a/b binding protein domain 56 260 - -
Gso11g3010 267 Pfam Chlorophyll A-B binding protein 66 233 IPR022796 -
Gso11g3010 267 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 8 267 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3010 Gso-Chr11 45947378 45949295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3010 1 266 Chloroplast and Mitochondria Gene Families AT3G27690 65.580 5.08e-121 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3010 K08914 - gmx:100790960 550.821