Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3001 ATGGTGATGATGAAGCTTGTAAAGTGGGTTTCCTTTGTTTTGGTTCTTTATTTGTTTTCGGTAAATGGTTCATTTGCCACATTCGCTCCTCGTGACAATTATCTAATTGCATGTGGTTCCTCCCAAAGCATAACTTTCCAAGACCGCACTTTTGTTCCTGATTCACAACATTCTTCACCAGTGTTGAAAACTGGTAATTCTGTTGTTGCCAGTTCCAATTCTAGTGTCCCTTCCCCAGTATACCAATCGGCTAGGATTTTCACTGAGAAAGCTTCTTATAGGTTTCAGGTTGAGGAAGGTAGGCACTGGCTTAGGCTATATTTTTCTCCTCTTCCCAACTCTGCCCATAATTTGACTGCTGCTGCTATAACAGTGGTCACTGACGATTTTGTTCTATTGTGCAACTTCTCCTTTAGGAGCTACAATGGTTCTTATATGTTTAGGGAGTATGCCATCAATGTTACATCTGATACCTTGACTGTTACCTTCATTCCTTCAAATGGTTCAGTTGCCTTTGTCAATGCAATTGAAGTTGTGTCAATGCCAAATGACTTGTTTGTTGATCAGGCATTGGCCCTTAACCCAACTGCACCATTCAATGGCCTTTCTGAACTTGCTTTTGAGACTGTTTATCGCTTAAACGTAGGAGGCCCCTTGCTCACTCCCCAAAATGACACCTTAGGAAGGACTTGGGAGAATGATCAGAAATACCTCCATGTGAATAGTTCAGTCATTAAGGTGTCTGTTAACCCTTCCAGTATTAAGTATCCAGCAGGTGTTACATCTGAGACGGCACCGAATTGGGTCTATGCCACTTCTGAAGCAATGGGGGATGCAAATGTACCAGACTCAAATTTCAACATCACTTGGGTCTTTCCTGTGGATCCAAACTTCTCCTATTTCATCCGGGTGCACTTTTGTGATATTATTAGCAAGTCTCTCAACACTTTAGTATTCAATTTGTTCATAAACGCTGACATAGCTCTTGGAAGCCTTGACCTCTCATCCATAACTAATGACTTGGCTGTGCCTTACTATAAGGACTTTGTTTCCAATGCCTCAGCAGACTCCAACATTTTGACAGTGAGTGTTGGTCCTGATTCAATGGCAGATATCACAAATGCCACTATGAATGGACTTGAGGTTATGAAGATCAGCAATGCATTCAAGAGCTTGGATGGACTTTCTTCAGTTGAGAGTTTCCTTCCCCATTCACCGTCAAGCAAAAGCAAGATGGGAATAATAGTTGGTTCTTCTGTTGGGGCTGTGGCTGCCATTGCTTTAGCTGGTTTGTGTTATTGCTGCCTTGCGAGATACAAATCAAAGTCTACTCAACAGGGCCATTCTTGGCTGCCTTTACCCTTGTATGGAAACTCTCAGACCATGACAAAAATGTCAACAACTTCACAGAAGAGTGCAACTGCAAGCATTATTTCTTTAGCTTCATCAAATCTTGGACGGTTGTTCACCTTCCAAGAGATCCTTGATGCAACCAACAAATTTGATGAGAAGCTGCTTCTTGGTGTTGGTGGTTTTGGCAGGGTTTATAAAGGGACTCTTGAAGATGGGACCAATGTGGCTGTTAAAAGGGGGAACCCGAGATCAGAACAAGGTCTTGCTGAATTCCGAACAGAAATTGAGATGTTATCCAAGCTTCGCCATCGCCATCTCGTGTCCCTCATTGGCTATTGTGACGAGAGATCAGAAATGATTCTTGTCTATGAGTACATGGCTAATGGACCTCTCAGGAGTCATTTGTATGGAACTGACCTGCCACCTCTATCATGGAAGCAGCGGCTTGAAATTTGCATTGGAGCAGCAAGAGGTCTTCATTATCTCCACACAGGAGCATCTCAGAGCATAATTCACCGCGACGTAAAGACAACTAACATCCTCGTAGATGATAACTTTGTTGCAAAGGTTGCTGACTTTGGCCTCTCCAAAACTGGTCCTGCTCTTGATCAGACTCATGTGAGCACTGCTGTTAAAGGTAGTTTCGGTTATCTTGATCCTGAATACTTCAGAAGGCAACAGCTTACAGAGAAATCAGATGTTTATTCATTTGGAGTAGTTTTGATGGAAGTTTTATGCACAAGACCAGCCTTGAACCCTGTCCTTCCAAGGGAGCAGGTTAACATAGCCGAGTGGGCAATGAGTTGGCAGAAGAAAGGAATGCTTGATCAAATTATGGATCAGAATCTGGTGGGGAAAGTCAATCCTGCTTCTCTTAAGAAGTTTGGGGAGACAGCTGAGAAGTGCTTGGCCGAGTATGGAGTGGATCGGCCGTCTATGGGCGACGTCTTGTGGAATCTTGAATATGCTTTGCAGCTTCAGGAGACCTCATCAGCACTCATGGAACCTGAAGATAACAGCACAAACCACATTACTGGAATTCAGTTAACACGTCTCAAGCCTTTTGATAACAGTGTCAATATGGTTGATGGGGGAAACTCTTTCACAGATGACGATGATGCAGAAGATGCTGCCACAAGTGCAGTGTTTTCGCAATTGGTAAATCCTCGCGGCAGATGA 2532 0.4336 MVMMKLVKWVSFVLVLYLFSVNGSFATFAPRDNYLIACGSSQSITFQDRTFVPDSQHSSPVLKTGNSVVASSNSSVPSPVYQSARIFTEKASYRFQVEEGRHWLRLYFSPLPNSAHNLTAAAITVVTDDFVLLCNFSFRSYNGSYMFREYAINVTSDTLTVTFIPSNGSVAFVNAIEVVSMPNDLFVDQALALNPTAPFNGLSELAFETVYRLNVGGPLLTPQNDTLGRTWENDQKYLHVNSSVIKVSVNPSSIKYPAGVTSETAPNWVYATSEAMGDANVPDSNFNITWVFPVDPNFSYFIRVHFCDIISKSLNTLVFNLFINADIALGSLDLSSITNDLAVPYYKDFVSNASADSNILTVSVGPDSMADITNATMNGLEVMKISNAFKSLDGLSSVESFLPHSPSSKSKMGIIVGSSVGAVAAIALAGLCYCCLARYKSKSTQQGHSWLPLPLYGNSQTMTKMSTTSQKSATASIISLASSNLGRLFTFQEILDATNKFDEKLLLGVGGFGRVYKGTLEDGTNVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILVDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMSWQKKGMLDQIMDQNLVGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLQETSSALMEPEDNSTNHITGIQLTRLKPFDNSVNMVDGGNSFTDDDDAEDAATSAVFSQLVNPRGR* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3001 843 Pfam Malectin-like domain 36 385 IPR024788 -
Gso11g3001 843 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 20 826 - -
Gso11g3001 843 Gene3D Phosphorylase Kinase; domain 1 459 576 - -
Gso11g3001 843 CDD STKc_IRAK 507 772 - -
Gso11g3001 843 PANTHER OS07G0166700 PROTEIN 20 826 IPR045272 GO:0004714|GO:0006468
Gso11g3001 843 ProSiteProfiles Protein kinase domain profile. 501 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3001 843 Pfam Protein tyrosine and serine/threonine kinase 506 767 IPR001245 GO:0004672|GO:0006468
Gso11g3001 843 SUPERFAMILY Protein kinase-like (PK-like) 478 772 IPR011009 -
Gso11g3001 843 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Gso11g3001 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Gso11g3001 843 Gene3D Transferase(Phosphotransferase) domain 1 577 796 - -
Gso11g3001 843 SMART serkin_6 501 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3001 843 Gene3D - 33 182 - -
Gso11g3001 843 Gene3D - 205 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3001 Gso-Chr11 45860483 45864222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3001 4 843 Receptor kinase-like Gene Family AT3G46290 51.995 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso11g3001 Malectin_like 2.3e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3001 - - gmx:100809700 1393.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1864 12 42401230 42405204 Gso11g3001 11 45860483 45864222 GST