Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso11g3001 | ATGGTGATGATGAAGCTTGTAAAGTGGGTTTCCTTTGTTTTGGTTCTTTATTTGTTTTCGGTAAATGGTTCATTTGCCACATTCGCTCCTCGTGACAATTATCTAATTGCATGTGGTTCCTCCCAAAGCATAACTTTCCAAGACCGCACTTTTGTTCCTGATTCACAACATTCTTCACCAGTGTTGAAAACTGGTAATTCTGTTGTTGCCAGTTCCAATTCTAGTGTCCCTTCCCCAGTATACCAATCGGCTAGGATTTTCACTGAGAAAGCTTCTTATAGGTTTCAGGTTGAGGAAGGTAGGCACTGGCTTAGGCTATATTTTTCTCCTCTTCCCAACTCTGCCCATAATTTGACTGCTGCTGCTATAACAGTGGTCACTGACGATTTTGTTCTATTGTGCAACTTCTCCTTTAGGAGCTACAATGGTTCTTATATGTTTAGGGAGTATGCCATCAATGTTACATCTGATACCTTGACTGTTACCTTCATTCCTTCAAATGGTTCAGTTGCCTTTGTCAATGCAATTGAAGTTGTGTCAATGCCAAATGACTTGTTTGTTGATCAGGCATTGGCCCTTAACCCAACTGCACCATTCAATGGCCTTTCTGAACTTGCTTTTGAGACTGTTTATCGCTTAAACGTAGGAGGCCCCTTGCTCACTCCCCAAAATGACACCTTAGGAAGGACTTGGGAGAATGATCAGAAATACCTCCATGTGAATAGTTCAGTCATTAAGGTGTCTGTTAACCCTTCCAGTATTAAGTATCCAGCAGGTGTTACATCTGAGACGGCACCGAATTGGGTCTATGCCACTTCTGAAGCAATGGGGGATGCAAATGTACCAGACTCAAATTTCAACATCACTTGGGTCTTTCCTGTGGATCCAAACTTCTCCTATTTCATCCGGGTGCACTTTTGTGATATTATTAGCAAGTCTCTCAACACTTTAGTATTCAATTTGTTCATAAACGCTGACATAGCTCTTGGAAGCCTTGACCTCTCATCCATAACTAATGACTTGGCTGTGCCTTACTATAAGGACTTTGTTTCCAATGCCTCAGCAGACTCCAACATTTTGACAGTGAGTGTTGGTCCTGATTCAATGGCAGATATCACAAATGCCACTATGAATGGACTTGAGGTTATGAAGATCAGCAATGCATTCAAGAGCTTGGATGGACTTTCTTCAGTTGAGAGTTTCCTTCCCCATTCACCGTCAAGCAAAAGCAAGATGGGAATAATAGTTGGTTCTTCTGTTGGGGCTGTGGCTGCCATTGCTTTAGCTGGTTTGTGTTATTGCTGCCTTGCGAGATACAAATCAAAGTCTACTCAACAGGGCCATTCTTGGCTGCCTTTACCCTTGTATGGAAACTCTCAGACCATGACAAAAATGTCAACAACTTCACAGAAGAGTGCAACTGCAAGCATTATTTCTTTAGCTTCATCAAATCTTGGACGGTTGTTCACCTTCCAAGAGATCCTTGATGCAACCAACAAATTTGATGAGAAGCTGCTTCTTGGTGTTGGTGGTTTTGGCAGGGTTTATAAAGGGACTCTTGAAGATGGGACCAATGTGGCTGTTAAAAGGGGGAACCCGAGATCAGAACAAGGTCTTGCTGAATTCCGAACAGAAATTGAGATGTTATCCAAGCTTCGCCATCGCCATCTCGTGTCCCTCATTGGCTATTGTGACGAGAGATCAGAAATGATTCTTGTCTATGAGTACATGGCTAATGGACCTCTCAGGAGTCATTTGTATGGAACTGACCTGCCACCTCTATCATGGAAGCAGCGGCTTGAAATTTGCATTGGAGCAGCAAGAGGTCTTCATTATCTCCACACAGGAGCATCTCAGAGCATAATTCACCGCGACGTAAAGACAACTAACATCCTCGTAGATGATAACTTTGTTGCAAAGGTTGCTGACTTTGGCCTCTCCAAAACTGGTCCTGCTCTTGATCAGACTCATGTGAGCACTGCTGTTAAAGGTAGTTTCGGTTATCTTGATCCTGAATACTTCAGAAGGCAACAGCTTACAGAGAAATCAGATGTTTATTCATTTGGAGTAGTTTTGATGGAAGTTTTATGCACAAGACCAGCCTTGAACCCTGTCCTTCCAAGGGAGCAGGTTAACATAGCCGAGTGGGCAATGAGTTGGCAGAAGAAAGGAATGCTTGATCAAATTATGGATCAGAATCTGGTGGGGAAAGTCAATCCTGCTTCTCTTAAGAAGTTTGGGGAGACAGCTGAGAAGTGCTTGGCCGAGTATGGAGTGGATCGGCCGTCTATGGGCGACGTCTTGTGGAATCTTGAATATGCTTTGCAGCTTCAGGAGACCTCATCAGCACTCATGGAACCTGAAGATAACAGCACAAACCACATTACTGGAATTCAGTTAACACGTCTCAAGCCTTTTGATAACAGTGTCAATATGGTTGATGGGGGAAACTCTTTCACAGATGACGATGATGCAGAAGATGCTGCCACAAGTGCAGTGTTTTCGCAATTGGTAAATCCTCGCGGCAGATGA | 2532 | 0.4336 | MVMMKLVKWVSFVLVLYLFSVNGSFATFAPRDNYLIACGSSQSITFQDRTFVPDSQHSSPVLKTGNSVVASSNSSVPSPVYQSARIFTEKASYRFQVEEGRHWLRLYFSPLPNSAHNLTAAAITVVTDDFVLLCNFSFRSYNGSYMFREYAINVTSDTLTVTFIPSNGSVAFVNAIEVVSMPNDLFVDQALALNPTAPFNGLSELAFETVYRLNVGGPLLTPQNDTLGRTWENDQKYLHVNSSVIKVSVNPSSIKYPAGVTSETAPNWVYATSEAMGDANVPDSNFNITWVFPVDPNFSYFIRVHFCDIISKSLNTLVFNLFINADIALGSLDLSSITNDLAVPYYKDFVSNASADSNILTVSVGPDSMADITNATMNGLEVMKISNAFKSLDGLSSVESFLPHSPSSKSKMGIIVGSSVGAVAAIALAGLCYCCLARYKSKSTQQGHSWLPLPLYGNSQTMTKMSTTSQKSATASIISLASSNLGRLFTFQEILDATNKFDEKLLLGVGGFGRVYKGTLEDGTNVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILVDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMSWQKKGMLDQIMDQNLVGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLQETSSALMEPEDNSTNHITGIQLTRLKPFDNSVNMVDGGNSFTDDDDAEDAATSAVFSQLVNPRGR* | 844 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso11g3001 | 843 | Pfam | Malectin-like domain | 36 | 385 | IPR024788 | - | |
Gso11g3001 | 843 | PANTHER | RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 | 20 | 826 | - | - | |
Gso11g3001 | 843 | Gene3D | Phosphorylase Kinase; domain 1 | 459 | 576 | - | - | |
Gso11g3001 | 843 | CDD | STKc_IRAK | 507 | 772 | - | - | |
Gso11g3001 | 843 | PANTHER | OS07G0166700 PROTEIN | 20 | 826 | IPR045272 | GO:0004714|GO:0006468 | |
Gso11g3001 | 843 | ProSiteProfiles | Protein kinase domain profile. | 501 | 774 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso11g3001 | 843 | Pfam | Protein tyrosine and serine/threonine kinase | 506 | 767 | IPR001245 | GO:0004672|GO:0006468 | |
Gso11g3001 | 843 | SUPERFAMILY | Protein kinase-like (PK-like) | 478 | 772 | IPR011009 | - | |
Gso11g3001 | 843 | ProSitePatterns | Protein kinases ATP-binding region signature. | 507 | 529 | IPR017441 | GO:0005524 | |
Gso11g3001 | 843 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 621 | 633 | IPR008271 | GO:0004672|GO:0006468 | |
Gso11g3001 | 843 | Gene3D | Transferase(Phosphotransferase) domain 1 | 577 | 796 | - | - | |
Gso11g3001 | 843 | SMART | serkin_6 | 501 | 774 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso11g3001 | 843 | Gene3D | - | 33 | 182 | - | - | |
Gso11g3001 | 843 | Gene3D | - | 205 | 387 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso11g3001 | Gso-Chr11 | 45860483 | 45864222 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso11g3001 | 4 | 843 | Receptor kinase-like Gene Family | AT3G46290 | 51.995 | 0.0 | 843 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CrRLK1L-1 | Gso11g3001 | Malectin_like | 2.3e-35 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso11g3001 | - | - | gmx:100809700 | 1393.25 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso12g1864 | 12 | 42401230 | 42405204 | Gso11g3001 | 11 | 45860483 | 45864222 | GST |